Inhibition of the double‐stranded RNA‐dependent protein kinase PKR by mammalian ribosomes

Previous evidence has shown that the majority of the interferon‐inducible, double‐stranded RNA‐dependent protein kinase PKR is associated with ribosomes in vivo. Here we show that ribosomes are inhibitory for PKR activity since they compete with dsRNA for binding to PKR, inhibit the activation of the protein kinase by dsRNA, and prevent the phosphorylation of the PKR substrate eIF2α. We suggest that ribosomes constitute a reservoir of inactive PKR and that the protein kinase must be displaced from the ribosome by dsRNA in order to become activated.

[1]  M J Clemens,et al.  Comparative analysis of the regulation of the interferon-inducible protein kinase PKR by Epstein-Barr virus RNAs EBER-1 and EBER-2 and adenovirus VAI RNA. , 1993, Nucleic acids research.

[2]  M. Katze,et al.  Cloning, expression, and cellular localization of the oncogenic 58-kDa inhibitor of the RNA-activated human and mouse protein kinase. , 1996, Gene.

[3]  M. Katze,et al.  The P58 Cellular Inhibitor Complexes with the Interferon-induced, Double-stranded RNA-dependent Protein Kinase, PKR, to Regulate Its Autophosphorylation and Activity (*) , 1996, The Journal of Biological Chemistry.

[4]  A. Laurent,et al.  Monoclonal antibodies to an interferon-induced Mr 68,000 protein and their use for the detection of double-stranded RNA-dependent protein kinase in human cells. , 1985, Proceedings of the National Academy of Sciences of the United States of America.

[5]  M. Katze,et al.  Mutants of the RNA-dependent protein kinase (PKR) lacking double-stranded RNA binding domain I can act as transdominant inhibitors and induce malignant transformation , 1995, Molecular and cellular biology.

[6]  M. Katze,et al.  Cellular inhibitors of the interferon-induced, dsRNA-activated protein kinase. , 1994, Progress in molecular and subcellular biology.

[7]  An essential role for the interferon-inducible, double-stranded RNA-activated protein kinase PKR in the tumor necrosis factor-induced apoptosis in U937 cells. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[8]  S. Der,et al.  A double-stranded RNA-activated protein kinase-dependent pathway mediating stress-induced apoptosis. , 1997, Proceedings of the National Academy of Sciences of the United States of America.

[9]  M. Mathews,et al.  Paradoxical interactions between human delta hepatitis agent RNA and the cellular protein kinase PKR , 1996, Journal of virology.

[10]  V. M. Pain Initiation of protein synthesis in eukaryotic cells. , 1996, European journal of biochemistry.

[11]  M. Clemens,et al.  Nuclear localization of the interferon-inducible protein kinase PKR in human cells and transfected mouse cells. , 1995, Experimental cell research.

[12]  G. Sen,et al.  Specific Mutations Near the Amino Terminus of Double-stranded RNA-dependent Protein Kinase (PKR) Differentially Affect Its Double-stranded RNA Binding and Dimerization Properties* , 1996, The Journal of Biological Chemistry.

[13]  R. Jagus,et al.  Interleukin 3 stimulates protein synthesis by regulating double-stranded RNA-dependent protein kinase. , 1994, Proceedings of the National Academy of Sciences of the United States of America.

[14]  J. Langland,et al.  Cytosolic double-stranded RNA-dependent protein kinase is likely a dimer of partially phosphorylated Mr = 66,000 subunits. , 1992, The Journal of biological chemistry.

[15]  R. Kaufman,et al.  Calcium Depletion from the Endoplasmic Reticulum Activates the Double-stranded RNA-dependent Protein Kinase (PKR) to Inhibit Protein Synthesis (*) , 1995, The Journal of Biological Chemistry.

[16]  M. Katze,et al.  The molecular chaperone hsp40 regulates the activity of P58IPK, the cellular inhibitor of PKR. , 1997, Proceedings of the National Academy of Sciences of the United States of America.

[17]  M. Katze,et al.  Functional expression and RNA binding analysis of the interferon-induced, double-stranded RNA-activated, 68,000-Mr protein kinase in a cell-free system , 1991, Molecular and cellular biology.

[18]  A. Hinnebusch,et al.  Structural requirements for double-stranded RNA binding, dimerization, and activation of the human eIF-2 alpha kinase DAI in Saccharomyces cerevisiae , 1995, Molecular and cellular biology.

[19]  M. Mathews,et al.  Adenovirus virus-associated RNA and translation control , 1991, Journal of virology.

[20]  J. Langland,et al.  Differential localization and accumulation of the plant double stranded RNA-dependent protein kinase during virus infection , 1998 .

[21]  Walther J. van Venrooij,et al.  The La antigen inhibits the activation of the interferon-inducible protein kinase PKR by sequestering and unwinding double-stranded RNA , 1994, Nucleic Acids Res..

[22]  M. Clemens,et al.  Regulation of the double-stranded RNA-dependent protein kinase PKR by RNAs encoded by a repeated sequence in the Epstein-Barr virus genome. , 1996, Nucleic acids research.

[23]  R. Rhoads,et al.  Progress in Molecular and Subcellular Biology , 1990, Progress in Molecular and Subcellular Biology.

[24]  M. Katze,et al.  Tumor suppressor function of the interferon-induced double-stranded RNA-activated protein kinase. , 1993, Proceedings of the National Academy of Sciences of the United States of America.

[25]  M. Mathews,et al.  Tat-responsive region RNA of human immunodeficiency virus 1 can prevent activation of the double-stranded-RNA-activated protein kinase. , 1990, Proceedings of the National Academy of Sciences of the United States of America.

[26]  R. Kaufman,et al.  Phosphorylation of Eukaryotic Translation Initiation Factor 2 Mediates Apoptosis in Response to Activation of the Double-stranded RNA-dependent Protein Kinase* , 1998, The Journal of Biological Chemistry.

[27]  M. Mathews,et al.  Functional characterization of the RNA-binding domain and motif of the double-stranded RNA-dependent protein kinase DAI (PKR). , 1995, Journal of molecular biology.

[28]  V. Pathak,et al.  The phosphorylation state of eucaryotic initiation factor 2 alters translational efficiency of specific mRNAs , 1989, Molecular and cellular biology.

[29]  M. Mathews,et al.  Modification of protein synthesis initiation factors and the shut-off of host protein synthesis in adenovirus-infected cells. , 1989, Virology.

[30]  I. London,et al.  Characterization of double-stranded-RNA-activated kinase that phosphorylates α subunit of eukaryotic initiation factor 2 (eIF-2α) in reticulocyte lysates , 1980 .

[31]  M. Katze,et al.  Adenovirus VAI RNA complexes with the 68 000 Mr protein kinase to regulate its autophosphorylation and activity. , 1987, The EMBO journal.

[32]  M. Katze,et al.  The binding of double-stranded RNA and adenovirus VAI RNA to the interferon-induced protein kinase. , 1989, European journal of biochemistry.

[33]  M. Katze,et al.  The 58-kilodalton inhibitor of the interferon-induced double-stranded RNA-activated protein kinase is a tetratricopeptide repeat protein with oncogenic properties. , 1994, Proceedings of the National Academy of Sciences of the United States of America.

[34]  C. Samuel,et al.  Mechanism of interferon action: RNA-binding activity of full-length and R-domain forms of the RNA-dependent protein kinase PKR--determination of KD values for VAI and TAR RNAs. , 1995, Virology.

[35]  P. Romano,et al.  Ribosome Targeting of PKR Is Mediated by Two Double-stranded RNA-binding Domains and Facilitates in Vivo Phosphorylation of Eukaryotic Initiation Factor-2* , 1997, The Journal of Biological Chemistry.

[36]  Tyson V. Sharp,et al.  Reversal of the double-stranded-RNA-induced inhibition of protein synthesis by a catalytically inactive mutant of the protein kinase PKR. , 1993, European journal of biochemistry.

[37]  A. Hovanessian,et al.  Autophosphorylation of the protein kinase dependent on double-stranded RNA. , 1987, The Journal of biological chemistry.

[38]  M. Brostrom,et al.  Independent Signaling of grp78 Gene Transcription and Phosphorylation of Eukaryotic Initiation Factor 2α by the Stressed Endoplasmic Reticulum (*) , 1995, The Journal of Biological Chemistry.

[39]  C. Samuel,et al.  Mechanism of interferon action. Activation of the human P1/eIF-2 alpha protein kinase by individual reovirus s-class mRNAs: s1 mRNA is a potent activator relative to s4 mRNA. , 1989, Virology.

[40]  Tyson V. Sharp,et al.  Regulation of the interferon-inducible protein kinase PKR and (2'-5')oligo(adenylate) synthetase by a catalytically inactive PKR mutant through competition for double-stranded RNA binding. , 1995, European journal of biochemistry.

[41]  M J Clemens,et al.  The double-stranded RNA-dependent protein kinase PKR: structure and function. , 1997, Journal of interferon & cytokine research : the official journal of the International Society for Interferon and Cytokine Research.

[42]  R. Jagus,et al.  Expression and purification of the alpha-subunit of eukaryotic initiation factor eIF2: use as a kinase substrate. , 1998, Protein expression and purification.

[43]  M. Katze,et al.  Malignant transformation by a mutant of the IFN-inducible dsRNA-dependent protein kinase. , 1992, Science.

[44]  R. Kaufman,et al.  Translational control mediated by eucaryotic initiation factor-2 is restricted to specific mRNAs in transfected cells , 1987, Molecular and cellular biology.

[45]  A. S. Braverman,et al.  Progress in Molecular and Subcellular Biology 3 , 1973, Progress in Molecular and Subcellular Biology.

[46]  S. B. Lee,et al.  The interferon-induced double-stranded RNA-activated protein kinase induces apoptosis. , 1994, Virology.

[47]  K. Jeang,et al.  Oncogenic potential of TAR RNA binding protein TRBP and its regulatory interaction with RNA‐dependent protein kinase PKR , 1997, The EMBO journal.

[48]  M. Brostrom,et al.  Activation of the Double-stranded RNA-regulated Protein Kinase by Depletion of Endoplasmic Reticular Calcium Stores (*) , 1995, The Journal of Biological Chemistry.