Computation of writhe in modeling of supercoiled DNA.
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[1] James H. White. Self-Linking and the Gauss Integral in Higher Dimensions , 1969 .
[2] F. B. Fuller. The writhing number of a space curve. , 1971, Proceedings of the National Academy of Sciences of the United States of America.
[3] D. Stigter,et al. Interactions of highly charged colloidal cylinders with applications to double‐stranded DNA , 1977 .
[4] V. Anshelevich,et al. Statistical mechanics of supercoils and the torsional stiffness of the DNA double helix , 1979, Nature.
[5] M. L. Bret. Catastrophic variation of twist and writhing of circular DNAs with constraint , 1979 .
[6] Marc Le Bret,et al. Monte carlo computation of the supercoiling energy, the sedimentation constant, and the radius of gyration of unknotted and knotted circular DNA , 1980, Biopolymers.
[7] Alexander Vologodskii,et al. REVIEWS OF TOPICAL PROBLEMS: Topological aspects of the physics of polymers: The theory and its biophysical applications , 1981 .
[8] V. Anshelevich,et al. Torsional and bending rigidity of the double helix from data on small DNA rings. , 1985, Journal of biomolecular structure & dynamics.
[9] D. Crothers,et al. Topological distributions and the torsional rigidity of DNA. A Monte Carlo study of DNA circles. , 1986, Journal of molecular biology.
[10] J. Shimada,et al. Moments for DNA topoisomers: The helical wormlike chain , 1988, Biopolymers.
[11] S. Harvey,et al. Molecular mechanics model of supercoiled DNA. , 1989, Journal of molecular biology.
[12] M. Waterman. Mathematical Methods for DNA Sequences , 1989 .
[13] M Frank-Kamenetskii,et al. Conformational and thermodynamic properties of supercoiled DNA. , 1992, Journal of molecular biology.
[14] Giuseppe Chirico,et al. Kinetics of DNA supercoiling studied by Brownian dynamics simulation , 1994 .
[15] K. Klenin,et al. Solution structure and dynamics of DNA topoisomers: Dynamic light scattering studies and Monte Carlo simulations , 1994 .
[16] J. Michael Schurr,et al. Monte Carlo simulations of supercoiling free energies for unknotted and trefoil knotted DNAs. , 1995, Biophysical journal.
[17] J Langowski,et al. Modulation of intramolecular interactions in superhelical DNA by curved sequences: a Monte Carlo simulation study. , 1995, Biophysical journal.
[18] V. Katritch,et al. The effect of intrinsic curvature on conformational properties of circular DNA. , 1997, Biophysical journal.
[19] J. Langowski,et al. Superhelix dimensions of a 1868 base pair plasmid determined by scanning force microscopy in air and in aqueous solution. , 1997, Nucleic acids research.
[20] J Langowski,et al. A Brownian dynamics program for the simulation of linear and circular DNA and other wormlike chain polyelectrolytes. , 1998, Biophysical journal.