Biological gene delivery vehicles: beyond viral vectors.

Gene therapy covers a broad spectrum of applications, from gene replacement and knockdown for genetic or acquired diseases such as cancer, to vaccination, each with different requirements for gene delivery. Viral vectors and synthetic liposomes have emerged as the vehicles of choice for many applications today, but both have limitations and risks, including complexity of production, limited packaging capacity, and unfavorable immunological features, which restrict gene therapy applications and hold back the potential for preventive gene therapy. While continuing to improve these vectors, it is important to investigate other options, particularly nonviral biological agents which include bacteria, bacteriophage, virus-like particles (VLPs), erythrocyte ghosts, and exosomes. Exploiting the natural properties of these biological entities for specific gene delivery applications will expand the repertoire of gene therapy vectors available for clinical use. Here, we review the prospects for nonviral biological delivery vehicles as gene therapy agents with focus on their unique evolved biological properties and respective limitations and potential applications. The potential of these nonviral biological entities to act as clinical gene therapy delivery vehicles has already been shown in clinical trials using bacteria-mediated gene transfer and with sufficient development, these entities will complement the established delivery techniques for gene therapy applications.

[1]  A. Kondo,et al.  Gene therapy of liver tumors with human liver-specific nanoparticles , 2007, Cancer Gene Therapy.

[2]  M. Magnani,et al.  Erythrocyte-mediated delivery of drugs, peptides and modified oligonucleotides , 2002, Gene Therapy.

[3]  B. Cukrowska,et al.  Commensal bacteria (normal microflora), mucosal immunity and chronic inflammatory and autoimmune diseases. , 2004, Immunology letters.

[4]  R. Coura,et al.  The state of the art of adeno-associated virus-based vectors in gene therapy , 2007, Virology Journal.

[5]  M. Hashida,et al.  The Fate of Plasmid DNA After Intravenous Injection in Mice: Involvement of Scavenger Receptors in Its Hepatic Uptake , 1995, Pharmaceutical Research.

[6]  V. Fadok,et al.  Exposure of phosphatidylserine on the surface of apoptotic lymphocytes triggers specific recognition and removal by macrophages. , 1992, Journal of immunology.

[7]  Simon C Watkins,et al.  Exosomes Derived from IL-10-Treated Dendritic Cells Can Suppress Inflammation and Collagen-Induced Arthritis 1 , 2005, The Journal of Immunology.

[8]  M. Strauss,et al.  Protection of Baculovirus-Vectors against Complement-Mediated Inactivation by Recombinant Soluble Complement Receptor Type 1 , 1999, Biological chemistry.

[9]  D. Liggitt,et al.  Type I interferons potently suppress gene expression following gene delivery using liposome(-)DNA complexes. , 2005, Molecular therapy : the journal of the American Society of Gene Therapy.

[10]  W. Doerfler,et al.  Autographa californica nuclear polyhedrosis virus (AcNPV) DNA does not persist in mass cultures of mammalian cells. , 1983, Virology.

[11]  P. Hofschneider,et al.  A novel system for efficient gene transfer into primary human hepatocytes via cell‐permeable hepatitis B virus–like particle , 2005, Hepatology.

[12]  M. Strauss,et al.  Baculovirus-mediated gene transfer in the presence of human serum or blood facilitated by inhibition of the complement system , 1998, Gene Therapy.

[13]  R. Fayad,et al.  Oral Administration with Papillomavirus Pseudovirus Encoding IL-2 Fully Restores Mucosal and Systemic Immune Responses to Vaccinations in Aged Mice1 , 2004, The Journal of Immunology.

[14]  M. Estes,et al.  Rotavirus virus-like particles administered mucosally induce protective immunity , 1997, Journal of virology.

[15]  M. Hashida,et al.  Development of gene drug delivery systems based on pharmacokinetic studies. , 2001, European journal of pharmaceutical sciences : official journal of the European Federation for Pharmaceutical Sciences.

[16]  H. Lilie,et al.  Assessment of cell type specific gene transfer of polyoma virus like particles presenting a tumor specific antibody Fv fragment. , 2002, Journal of virological methods.

[17]  P. Cannon,et al.  Chimeric gag-V3 virus-like particles of human immunodeficiency virus induce virus-neutralizing antibodies. , 1992, Proceedings of the National Academy of Sciences of the United States of America.

[18]  S. Harrison,et al.  Papillomavirus capsid protein expression in Escherichia coli: purification and assembly of HPV11 and HPV16 L1. , 2001, Journal of molecular biology.

[19]  C. Chu,et al.  Enhancement of humoral and cellular immune responses by an oral Salmonella choleraesuis vaccine expressing porcine prothymosin alpha. , 2005, Vaccine.

[20]  R. Ali,et al.  AAV-Mediated gene transfer slows photoreceptor loss in the RCS rat model of retinitis pigmentosa. , 2003, Molecular therapy : the journal of the American Society of Gene Therapy.

[21]  R. Daniel,et al.  Integration site selection by retroviral vectors: molecular mechanism and clinical consequences. , 2008, Human gene therapy.

[22]  S. Rayner,et al.  Sustained ex vivo and in vivo transfer of a reporter gene using polyoma virus pseudocapsids , 2000, Gene Therapy.

[23]  Daniel I. Lipin,et al.  Towards the preparative and large-scale precision manufacture of virus-like particles. , 2005, Trends in biotechnology.

[24]  H. Byun,et al.  Erythrocyte ghost-mediated gene delivery for prolonged and blood-targeted expression , 2004, Gene Therapy.

[25]  D. Geddes,et al.  Bactofection of lung epithelial cells in vitro and in vivo using a genetically modified Escherichia coli , 2008, Gene Therapy.

[26]  Shuanglin Xiang,et al.  Short hairpin RNA–expressing bacteria elicit RNA interference in mammals , 2006, Nature Biotechnology.

[27]  T. V. van Berkel,et al.  Uptake and processing of modified bacteriophage M13 in mice: implications for phage display. , 2002, Virology.

[28]  J. March,et al.  Bacteriophage lambda is a highly stable DNA vaccine delivery vehicle. , 2004, Vaccine.

[29]  C. Higgins,et al.  Virus-like gene transfer into cells mediated by polyoma virus pseudocapsids , 2000, Gene Therapy.

[30]  D. Muruve,et al.  Immune responses to adeno-associated virus vectors. , 2005, Current gene therapy.

[31]  A. Zanella,et al.  Erythrocyte engineering for drug delivery and targeting , 1998, Biotechnology and applied biochemistry.

[32]  R. Fayad,et al.  Human Immunodeficiency Virus Type 1 Gag-Specific Mucosal Immunity after Oral Immunization with Papillomavirus Pseudoviruses Encoding Gag , 2004, Journal of Virology.

[33]  G. Devauchelle,et al.  Incorporation of pseudorabies virus gD into human immunodeficiency virus type 1 Gag particles produced in baculovirus-infected cells , 1995, Journal of virology.

[34]  Patrice Courvalin,et al.  Functional gene transfer from intracellular bacteria to mammalian cells , 1998, Nature Biotechnology.

[35]  John Mao,et al.  Phase I study of the intravenous administration of attenuated Salmonella typhimurium to patients with metastatic melanoma. , 2002, Journal of clinical oncology : official journal of the American Society of Clinical Oncology.

[36]  J. Lötvall,et al.  Exosome-mediated transfer of mRNAs and microRNAs is a novel mechanism of genetic exchange between cells , 2007, Nature Cell Biology.

[37]  A. Constable,et al.  Detection and classification of Streptococcus thermophilus bacteriophages isolated from industrial milk fermentation , 1994, Applied and environmental microbiology.

[38]  L. Machesky,et al.  Fluorescent erythrocyte ghosts as standards for quantitative flow cytometry. , 1995, Cytometry.

[39]  F. Bushman,et al.  Insertional oncogenesis in 4 patients after retrovirus-mediated gene therapy of SCID-X1. , 2008, The Journal of clinical investigation.

[40]  D. Artis Epithelial-cell recognition of commensal bacteria and maintenance of immune homeostasis in the gut , 2008, Nature Reviews Immunology.

[41]  R. Brent,et al.  Introduction to Vectors Derived from Filamentous Phages , 1991, Current protocols in molecular biology.

[42]  Matthias John,et al.  Therapeutic silencing of an endogenous gene by systemic administration of modified siRNAs , 2004, Nature.

[43]  Jennifer Sturgis,et al.  Bacteria-mediated delivery of nanoparticles and cargo into cells. , 2007, Nature nanotechnology.

[44]  J. Jakubovský,et al.  The use of transformed Escherichia coli for experimental angiogenesis induced by regulated in situ production of vascular endothelial growth factor--an alternative gene therapy. , 2005, Medical hypotheses.

[45]  B. Griffin,et al.  Immunity against both polyomavirus VP1 and a transgene product induced following intranasal delivery of VP1 pseudocapsid-DNA complexes. , 2001, The Journal of general virology.

[46]  M. Magnani,et al.  Inhibition of macrophage iNOS by selective targeting of antisense PNA. , 2002, Biochemistry.

[47]  Takayuki Sasaki,et al.  Strong Enhancement of Recombinant Cytosine Deaminase Activity in Bifidobacterium longum for Tumor-Targeting Enzyme/Prodrug Therapy , 2007, Bioscience, biotechnology, and biochemistry.

[48]  J. Marks,et al.  Targeted gene delivery to mammalian cells by filamentous bacteriophage. , 1999, Journal of molecular biology.

[49]  T. Ishida,et al.  Accelerated clearance of a second injection of PEGylated liposomes in mice. , 2003, International journal of pharmaceutics.

[50]  J. Ellis Silencing and variegation of gammaretrovirus and lentivirus vectors. , 2005, Human gene therapy.

[51]  R. Mandel,et al.  Immune responses to adenovirus and adeno-associated vectors used for gene therapy of brain diseases: the role of immunological synapses in understanding the cell biology of neuroimmune interactions. , 2007, Current gene therapy.

[52]  O. Danos,et al.  Long-term expression and repeated administration of AAV type 1, 2 and 5 vectors in skeletal muscle of immunocompetent adult mice , 2006, Gene Therapy.

[53]  Feng Liu,et al.  Non‐immunostimulatory nonviral vectors , 2004, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

[54]  M. Magnani,et al.  Modulated red blood cell survival by membrane protein clustering , 1995, Molecular and Cellular Biochemistry.

[55]  N. Jain,et al.  Folate Conjugated Doxorubicin-Loaded Membrane Vesicles for Improved Cancer Therapy , 2003, Drug delivery.

[56]  N. Taylor,et al.  Correction of interleukin-2 receptor function in X-SCID lymphoblastoid cells by retrovirally mediated transfer of the gamma-c gene. , 1996, Blood.

[57]  J. Pawelek,et al.  Tumor-targeted Salmonella as a novel anticancer vector. , 1997, Cancer research.

[58]  D. Kuritzkes,et al.  Whole recombinant yeast vaccine activates dendritic cells and elicits protective cell-mediated immunity , 2001, Nature Medicine.

[59]  D. Lugg,et al.  Antibody responses to bacteriophage phi X-174 in human subjects exposed to the antarctic winter-over model of spaceflight. , 2001, The Journal of allergy and clinical immunology.

[60]  H. J. Baker,et al.  Cell targeted phagemid rescued by preselected landscape phage. , 2004, Gene.

[61]  K. High,et al.  AAV-mediated gene transfer for the treatment of hemophilia B: problems and prospects , 2008, Gene Therapy.

[62]  Y. Morikawa,et al.  HIV type 1 Gag virus-like particle budding from spheroplasts of Saccharomyces cerevisiae , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[63]  Veronica Canadien,et al.  Listeriolysin O allows Listeria monocytogenes replication in macrophage vacuoles , 2008, Nature.

[64]  H. Ackermann,et al.  Characteristics and diffusion in the rabbit of a phage for Escherichia coli 0103. Attempts to use this phage for therapy. , 1992, Veterinary microbiology.

[65]  V. Deshpande,et al.  Bacteriophage Lambda as a Cloning Vector , 1992, Microbiological reviews.

[66]  P. Coursaget,et al.  Gene transfer using human polyomavirus BK virus-like particles expressed in insect cells. , 2001, The Journal of general virology.

[67]  C. Merril,et al.  Fate of Bacteriophage Lambda in Non-immune Germ-free Mice , 1973, Nature.

[68]  A. Kondo,et al.  Nanoparticles for the delivery of genes and drugs to human hepatocytes , 2003, Nature Biotechnology.

[69]  N. Smalheiser Exosomal transfer of proteins and RNAs at synapses in the nervous system , 2007, Biology Direct.

[70]  S Gasic,et al.  In vivo clearance of antibody‐sensitized human drug carrier erythrocytes , 1986, Clinical pharmacology and therapeutics.

[71]  R. Scheule The role of CpG motifs in immunostimulation and gene therapy. , 2000, Advanced drug delivery reviews.

[72]  Qiang Feng,et al.  Biologic properties and enucleation of red blood cells from human embryonic stem cells. , 2008, Blood.

[73]  George Q. Daley,et al.  Disease-Specific Induced Pluripotent Stem Cells , 2008, Cell.

[74]  T. Verch,et al.  In vivo bactofection: listeria can function as a DNA-cancer vaccine. , 2006, DNA and cell biology.

[75]  Y. Kaneda,et al.  Enhancement of transgene expression by cotransfection of oriP plasmid with EBNA-1 expression vector. , 2000, Human gene therapy.

[76]  I. Dhar,et al.  Transfusion transmitted virus: A review on its molecular characteristics and role in medicine. , 2006, World journal of gastroenterology.

[77]  M. Estes,et al.  Recombinant Norwalk Virus-Like Particles Administered Intranasally to Mice Induce Systemic and Mucosal (Fecal and Vaginal) Immune Responses , 2001, Journal of Virology.

[78]  A. Turchetta,et al.  A pilot trial on safety and efficacy of erythrocyte-mediated steroid treatment in CF patients , 2006, BMC pediatrics.

[79]  M. Rohde,et al.  Functional transfer of eukaryotic expression plasmids to mammalian cells by Listeria monocytogenes: a mechanistic approach , 2005, The journal of gene medicine.

[80]  R. Wade-Martins,et al.  Advances in high-capacity extrachromosomal vector technology: episomal maintenance, vector delivery, and transgene expression. , 2008, Molecular therapy : the journal of the American Society of Gene Therapy.

[81]  Chi-Fang Chang,et al.  Inhibition of simian virus 40 large tumor antigen expression in human fetal glial cells by an antisense oligodeoxynucleotide delivered by the JC virus-like particle. , 2004, Human gene therapy.

[82]  K. Jensen-Pergakes,et al.  Enhanced phagemid particle gene transfer in camptothecin-treated carcinoma cells. , 2002, Cancer research.

[83]  L. Qiao,et al.  Papillomavirus Pseudovirus: a Novel Vaccine To Induce Mucosal and Systemic Cytotoxic T-Lymphocyte Responses , 2001, Journal of Virology.

[84]  Shinsaku Nakagawa,et al.  Innate immune response induced by gene delivery vectors. , 2008, International journal of pharmaceutics.

[85]  H. Lilie,et al.  Cell-Type Specific Targeting and Gene Expression Using a Variant of Polyoma VP1 Virus-Like Particles , 2003, Biological chemistry.

[86]  G. Damonte,et al.  Synthesis and targeted delivery of an azidothymidine homodinucleotide conferring protection to macrophages against retroviral infection. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[87]  J. Mallet,et al.  Efficient transduction of neural cells in vitro and in vivo by a baculovirus-derived vector. , 2000, Proceedings of the National Academy of Sciences of the United States of America.

[88]  Feng Liu,et al.  Implications of pharmacokinetic behavior of lipoplex for its inflammatory toxicity. , 2005, Advanced drug delivery reviews.

[89]  黄莚庭,et al.  Autologous transfusion , 2004 .

[90]  Y. Oh,et al.  Enhanced mucosal and systemic immunogenicity of human papillomavirus-like particles encapsidating interleukin-2 gene adjuvant. , 2004, Virology.

[91]  J. Sommer,et al.  Effects of transient immunosuppression on adenoassociated, virus-mediated, liver-directed gene transfer in rhesus macaques and implications for human gene therapy. , 2006, Blood.

[92]  Y. Asano,et al.  Modulation of the Immune System by Listeria monocytogenes‐Mediated Gene Transfer into Mammalian Cells , 2004, Microbiology and immunology.

[93]  Wenjuan Yang,et al.  Transdermal protein delivery by a coadministered peptide identified via phage display , 2006, Nature Biotechnology.

[94]  Zhong Huang,et al.  Virus-like particle expression and assembly in plants: hepatitis B and Norwalk viruses. , 2005, Vaccine.

[95]  J. Wal,et al.  In vivo transfer of plasmid from food-grade transiting lactococci to murine epithelial cells , 2008, Gene Therapy.

[96]  K. Lundstrom Latest development in viral vectors for gene therapy. , 2003, Trends in biotechnology.

[97]  David A. Williams RAC reviews serious adverse event associated with AAV therapy trial. , 2007, Molecular therapy : the journal of the American Society of Gene Therapy.

[98]  E. Cundari,et al.  Mammalian cell transduction and internalization properties of λ phages displaying the full-length adenoviral penton base or its central domain , 2004, Journal of Molecular Medicine.

[99]  C. Leclerc,et al.  Recombinant parvovirus-like particles as an antigen carrier: a novel nonreplicative exogenous antigen to elicit protective antiviral cytotoxic T cells. , 1997, Proceedings of the National Academy of Sciences of the United States of America.

[100]  K. Ishii,et al.  Efficient gene transfer into various mammalian cells, including non-hepatic cells, by baculovirus vectors. , 1997, The Journal of general virology.

[101]  A. Gressner,et al.  Evaluation of hepatotropic targeting properties of allogenic and xenogenic erythrocyte ghosts in normal and liver‐injured rats , 2007, Liver international : official journal of the International Association for the Study of the Liver.

[102]  Y. Matsuura,et al.  Baculovirus Induces an Innate Immune Response and Confers Protection from Lethal Influenza Virus Infection in Mice1 , 2003, The Journal of Immunology.

[103]  M. Magnani,et al.  Targeting antiretroviral nucleoside analogues in phosphorylated form to macrophages: in vitro and in vivo studies. , 1992, Proceedings of the National Academy of Sciences of the United States of America.

[104]  Meng Yang,et al.  Monotherapy with a tumor-targeting mutant of Salmonella typhimurium cures orthotopic metastatic mouse models of human prostate cancer , 2007, Proceedings of the National Academy of Sciences.

[105]  P. Coursaget,et al.  In vitro gene transfer using human papillomavirus-like particles. , 1998, Nucleic acids research.

[106]  James M. Allen,et al.  Sustained AAV-mediated dystrophin expression in a canine model of Duchenne muscular dystrophy with a brief course of immunosuppression. , 2007, Molecular therapy : the journal of the American Society of Gene Therapy.

[107]  J. Ellis,et al.  Silencing of gene expression: implications for design of retrovirus vectors , 2001, Reviews in medical virology.

[108]  G. Pierce,et al.  Targeting bacteriophage to mammalian cell surface receptors for gene delivery. , 1998, Human gene therapy.

[109]  Y. Yoshioka,et al.  Development of PEGylated adenovirus vector with targeting ligand. , 2008, International journal of pharmaceutics.

[110]  David N Sheppard,et al.  CpG-free plasmids confer reduced inflammation and sustained pulmonary gene expression , 2008, Nature Biotechnology.

[111]  S. Updike,et al.  Infusion of red blood cell-loaded asparaginase in monkey. Immunologic, metabolic, and toxicologic consequences. , 1983, The Journal of laboratory and clinical medicine.

[112]  C. Malboeuf,et al.  Human papillomavirus-like particles mediate functional delivery of plasmid DNA to antigen presenting cells in vivo. , 2007, Vaccine.

[113]  A. Abdul-Wahid,et al.  Mucosal delivery of a transmission-blocking DNA vaccine encoding Giardia lamblia CWP2 by Salmonella typhimurium bactofection vehicle. , 2007, Vaccine.

[114]  Bradley C. Bundy,et al.  Escherichia coli‐based cell‐free synthesis of virus‐like particles , 2008, Biotechnology and bioengineering.

[115]  J. Christodoulou,et al.  Potential of AAV vectors in the treatment of metabolic disease , 2008, Gene Therapy.

[116]  P. Brun,et al.  Engineered E. coli delivers therapeutic genes to the colonic mucosa , 2005, Gene Therapy.

[117]  Z. Hartman,et al.  Adenovirus vector induced innate immune responses: impact upon efficacy and toxicity in gene therapy and vaccine applications. , 2008, Virus research.

[118]  W. Goebel,et al.  Bacterial delivery of functional messenger RNA to mammalian cells , 2005, Cellular microbiology.

[119]  M. Rudolph,et al.  Incorporation of decay-accelerating factor into the baculovirus envelope generates complement-resistant gene transfer vectors , 2001, Nature Biotechnology.

[120]  Tiansen Li,et al.  DNA vaccine-encapsulated virus-like particles derived from an orally transmissible virus stimulate mucosal and systemic immune responses by oral administration , 2004, Gene Therapy.

[121]  Qian Zhang,et al.  Visualization of tumors and metastases in live animals with bacteria and vaccinia virus encoding light-emitting proteins , 2004, Nature Biotechnology.

[122]  H. Ochs,et al.  Immunologic responses to bacteriophage phi-X 174 in immunodeficiency diseases. , 1971, The Journal of clinical investigation.

[123]  E. Lechman,et al.  Exosomes derived from genetically modified DC expressing FasL are anti-inflammatory and immunosuppressive. , 2006, Molecular therapy : the journal of the American Society of Gene Therapy.

[124]  N. Senzer,et al.  Pilot trial of genetically modified, attenuated Salmonella expressing the E. coli cytosine deaminase gene in refractory cancer patients , 2003, Cancer Gene Therapy.

[125]  H. Li,et al.  Local immunomodulation with CD4 and CD8 antibodies, but not cyclosporine A, improves osteogenesis induced by ADhBMP9 gene therapy , 2005, Gene Therapy.

[126]  W. Brown,et al.  Delivery of antisense oligonucleotides to leukemia cells by RNA bacteriophage capsids. , 2005, Nanomedicine : nanotechnology, biology, and medicine.

[127]  Gerold Schuler,et al.  Immature, semi-mature and fully mature dendritic cells: which signals induce tolerance or immunity? , 2002, Trends in immunology.

[128]  C. Merril,et al.  Long-circulating bacteriophage as antibacterial agents. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[129]  K. Jensen-Pergakes,et al.  Receptor-targeted gene delivery using multivalent phagemid particles. , 2001, Molecular therapy : the journal of the American Society of Gene Therapy.

[130]  R. Schreiber,et al.  Baculovirus Stimulates Antiviral Effects in Mammalian Cells , 1999, Journal of Virology.

[131]  W. Goebel,et al.  Prodrug converting enzyme gene delivery by L. monocytogenes , 2008, BMC Cancer.

[132]  M. Taniguchi,et al.  Induction of natural killer cell-dependent antitumor immunity by the Autographa californica multiple nuclear polyhedrosis virus. , 2008, Molecular therapy : the journal of the American Society of Gene Therapy.