Type 1 diabetes in pregnancy is associated with distinct changes in the composition and function of the gut microbiome
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Alexandra J. Roth-Schulze | S. Barry | R. Thomson | G. Smyth | G. Morahan | A. Papenfuss | E. Davis | L. Harrison | E. Bandala-Sanchez | J. Couper | R. Sinnott | T. Allnutt | P. Colman | M. Craig | M. Harris | P. Vuillermin | J. Wentworth | H. Oakey | W. Rawlinson | N. Bediaga | A. Haynes | G. Soldatos | K. Ngui | M. Penno | Alan Smith
[1] N. Dash,et al. Metagenomic Analysis of the Gut Microbiome Reveals Enrichment of Menaquinones (Vitamin K2) Pathway in Diabetes Mellitus , 2020, Diabetes & metabolism journal.
[2] Alexandra J. Roth-Schulze,et al. Gut microbiome dysbiosis and increased intestinal permeability in children with islet autoimmunity and type 1 diabetes: A prospective cohort study , 2019, Pediatric diabetes.
[3] Kevin S. Bonham,et al. Multi-omics of the gut microbial ecosystem in inflammatory bowel diseases , 2019, Nature.
[4] Kento Sawane,et al. Metabolism of Dietary and Microbial Vitamin B Family in the Regulation of Host Immunity , 2019, Front. Nutr..
[5] L. Harrison,et al. Association of Rotavirus Vaccination With the Incidence of Type 1 Diabetes in Children , 2019, JAMA pediatrics.
[6] L. Groot,et al. Vitamin B12 in Relation to Oxidative Stress: A Systematic Review. , 2019 .
[7] L. D. de Groot,et al. Vitamin B12 in Relation to Oxidative Stress: A Systematic Review , 2019, Nutrients.
[8] C. Huttenhower,et al. The human gut microbiome in early-onset type 1 diabetes from the TEDDY study , 2018, Nature.
[9] Luke R. Thompson,et al. Species-level functional profiling of metagenomes and metatranscriptomes , 2018, Nature Methods.
[10] Anthony Maxwell,et al. Dietary and Microbial Oxazoles Induce Intestinal Inflammation by Modulating Aryl Hydrocarbon Receptor Responses , 2018, Cell.
[11] Alexandra J. Roth-Schulze,et al. Influence of fecal collection conditions and 16S rRNA gene sequencing at two centers on human gut microbiota analysis , 2018, Scientific Reports.
[12] M. Wang,et al. Cloning, purification and biochemical characterization of two β-N-acetylhexosaminidases from the mucin-degrading gut bacterium Akkermansia muciniphila. , 2018, Carbohydrate research.
[13] Curtis Huttenhower,et al. bioBakery: a meta’omic analysis environment , 2017, Bioinform..
[14] Markus Krummenacker,et al. The MetaCyc database of metabolic pathways and enzymes , 2017, Nucleic acids research.
[15] W. D. de Vos,et al. Distinct fecal and oral microbiota composition in human type 1 diabetes, an observational study , 2017, PloS one.
[16] Jin-Ju Jeong,et al. Gastrointestinal inflammation by gut microbiota disturbance induces memory impairment in mice , 2017, Mucosal Immunology.
[17] James L. Richards,et al. Gut microbial metabolites limit the frequency of autoimmune T cells and protect against type 1 diabetes , 2017, Nature Immunology.
[18] Aaron T. L. Lun,et al. No counts, no variance: allowing for loss of degrees of freedom when assessing biological variability from RNA-seq data , 2017, Statistical applications in genetics and molecular biology.
[19] D. Cohen,et al. Publisher's Note , 2017, Neuroscience & Biobehavioral Reviews.
[20] H. Flint,et al. Formation of propionate and butyrate by the human colonic microbiota. , 2017, Environmental microbiology.
[21] S. Lynch,et al. The Human Intestinal Microbiome in Health and Disease. , 2016, The New England journal of medicine.
[22] H. Fukui. Increased Intestinal Permeability and Decreased Barrier Function: Does It Really Influence the Risk of Inflammation? , 2016, Inflammatory Intestinal Diseases.
[23] F. Bäckhed,et al. From Dietary Fiber to Host Physiology: Short-Chain Fatty Acids as Key Bacterial Metabolites , 2016, Cell.
[24] U. Sauer,et al. The maternal microbiota drives early postnatal innate immune development , 2016, Science.
[25] H. Siljander,et al. The role of the intestinal microbiota in type 1 diabetes mellitus , 2016, Nature Reviews Endocrinology.
[26] Minoru Kanehisa,et al. KEGG as a reference resource for gene and protein annotation , 2015, Nucleic Acids Res..
[27] Stephan Mehler,et al. Modern Applied Statistics , 2016 .
[28] Duy Tin Truong,et al. MetaPhlAn2 for enhanced metagenomic taxonomic profiling , 2015, Nature Methods.
[29] Christine L. Sun,et al. Temporal and spatial variation of the human microbiota during pregnancy , 2015, Proceedings of the National Academy of Sciences.
[30] Tommi Vatanen,et al. The dynamics of the human infant gut microbiome in development and in progression toward type 1 diabetes. , 2015, Cell host & microbe.
[31] Matthew E. Ritchie,et al. limma powers differential expression analyses for RNA-sequencing and microarray studies , 2015, Nucleic acids research.
[32] V. Young,et al. The gut microbiome in health and in disease , 2015, Current opinion in gastroenterology.
[33] H. Flint,et al. ‘ Diet, gut microbiology and human health , 2015 .
[34] D. Bates,et al. Fitting Linear Mixed-Effects Models Using lme4 , 2014, 1406.5823.
[35] R Core Team,et al. R: A language and environment for statistical computing. , 2014 .
[36] Derrick E. Wood,et al. Kraken: ultrafast metagenomic sequence classification using exact alignments , 2014, Genome Biology.
[37] Charity W. Law,et al. voom: precision weights unlock linear model analysis tools for RNA-seq read counts , 2014, Genome Biology.
[38] T. Jones,et al. Environmental determinants of islet autoimmunity (ENDIA): a pregnancy to early life cohort study in children at-risk of type 1 diabetes , 2013, BMC Pediatrics.
[39] Susan Holmes,et al. phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data , 2013, PloS one.
[40] Christian Milani,et al. Bacteria as vitamin suppliers to their host: a gut microbiota perspective. , 2013, Current opinion in biotechnology.
[41] J. Ilonen,et al. Fecal Microbiota Composition Differs Between Children With β-Cell Autoimmunity and Those Without , 2013, Diabetes.
[42] Sanjai J. Parikh,et al. Host-Derived Nitrate Boosts Growth of E. coli in the Inflamed Gut , 2013, Science.
[43] S. Garg,et al. Serum Inflammatory Markers and Preeclampsia in Type 1 Diabetes , 2013, Diabetes Care.
[44] J. Skupień,et al. 1,5-Anhydroglucitol as a marker of maternal glycaemic control and predictor of neonatal birthweight in pregnancies complicated by type 1 diabetes mellitus , 2013, Diabetologia.
[45] G. Morahan,et al. Definition of High-Risk Type 1 Diabetes HLA-DR and HLA-DQ Types Using Only Three Single Nucleotide Polymorphisms , 2013, Diabetes.
[46] Satish,et al. Serum In fl ammatory Markers and Preeclampsia in Type 1 Diabetes A prospective study , 2013 .
[47] L. T. Angenent,et al. Host Remodeling of the Gut Microbiome and Metabolic Changes during Pregnancy , 2012, Cell.
[48] E. Benjamin,et al. Plasma pyridoxal-5-phosphate is inversely associated with systemic markers of inflammation in a population of U.S. adults. , 2012, The Journal of nutrition.
[49] W. M. Vos,et al. Microbes inside—from diversity to function: the case of Akkermansia , 2012, The ISME Journal.
[50] J. Clemente,et al. Human gut microbiome viewed across age and geography , 2012, Nature.
[51] J. Clemente,et al. The Impact of the Gut Microbiota on Human Health: An Integrative View , 2012, Cell.
[52] M. Shearer,et al. Vitamin K nutrition, metabolism, and requirements: current concepts and future research. , 2012, Advances in nutrition.
[53] E. Mohammadi,et al. Barriers and facilitators related to the implementation of a physiological track and trigger system: A systematic review of the qualitative evidence , 2017, International journal for quality in health care : journal of the International Society for Quality in Health Care.
[54] R. Ouellette,et al. Type 1 diabetes impairs vitamin B(6) metabolism at an early stage of women's adulthood. , 2012, Applied physiology, nutrition, and metabolism = Physiologie appliquee, nutrition et metabolisme.
[55] Olli Simell,et al. Gut Microbiome Metagenomics Analysis Suggests a Functional Model for the Development of Autoimmunity for Type 1 Diabetes , 2011, PloS one.
[56] R. Knight,et al. Development of the human gastrointestinal microbiota and insights from high-throughput sequencing. , 2011, Gastroenterology.
[57] Jennifer C. Drew,et al. Toward defining the autoimmune microbiome for type 1 diabetes , 2011, The ISME Journal.
[58] William N. Venables,et al. Modern Applied Statistics with S , 2010 .
[59] Sanford Weisberg,et al. An R Companion to Applied Regression , 2010 .
[60] B. Kramer,et al. Non-Invasive Markers for Early Diagnosis and Determination of the Severity of Necrotizing Enterocolitis , 2010, Annals of surgery.
[61] Thomas Bjarnsholt,et al. Antibiotic resistance of bacterial biofilms. , 2010, International journal of antimicrobial agents.
[62] M. Robinson,et al. A scaling normalization method for differential expression analysis of RNA-seq data , 2010, Genome Biology.
[63] Harry J. Flint,et al. Diversity, metabolism and microbial ecology of butyrate-producing bacteria from the human large intestine. , 2009, FEMS microbiology letters.
[64] N. Sattar,et al. Inflammation and Endothelial Activation Is Evident at Birth in Offspring of Mothers With Type 1 Diabetes , 2007, Diabetes.
[65] R. Paroni,et al. Increased intestinal permeability precedes clinical onset of type 1 diabetes , 2006, Diabetologia.
[66] A. Jawerbaum,et al. Diabetic pregnancies: the challenge of developing in a pro-inflammatory environment. , 2006, Current medicinal chemistry.
[67] Søren Højsgaard,et al. The R Package geepack for Generalized Estimating Equations , 2005 .
[68] James W. Hardin,et al. Generalized Estimating Equations (GEE) , 2005 .
[69] Editors-in-chief,et al. Encyclopedia of statistics in behavioral science , 2005 .
[70] Amanda J. Patterson,et al. The Anti Cancer Council of Victoria FFQ: relative validity of nutrient intakes compared with weighed food records in young to middle‐aged women in a study of iron supplementation , 2000, Australian and New Zealand journal of public health.
[71] A. Berstad,et al. Relationship between intestinal permeability and calprotectin concentration in gut lavage fluid. , 2000, Scandinavian journal of gastroenterology.
[72] H. Strobel. Vitamin B12-dependent propionate production by the ruminal bacterium Prevotella ruminicola 23 , 1992, Applied and environmental microbiology.
[73] G. Eisenbarth. Type I diabetes mellitus. A chronic autoimmune disease. , 1986 .
[74] A. Krolewski,et al. Differences in risk of insulin-dependent diabetes in offspring of diabetic mothers and diabetic fathers. , 1985, The New England journal of medicine.
[75] A. Krolewski,et al. Differences in Risk of Insulin-Dependent Diabetes in Offspring of Diabetic Mothers and Diabetic Fathers , 1984 .
[76] R. Davis,et al. SERUM PYRIDOXAL CONCENTRATIONS IN CHILDREN WITH DIABETES MELLITUS , 1977, Pathology.