One-Step Deep Learning Approach to Ultrasound Image Formation and Image Segmentation with a Fully Convolutional Neural Network

Single plane wave imaging is well-suited to high frame rate imaging tasks (e.g., ultrasound based robotic tracking). However, suboptimal image quality is obtained when limited to a single plane wave transmission. To address this challenge, we propose to train deep neural networks (DNNs) as an alternative to delay-and-sum beamforming followed by segmentation. Our overall goal is to extract information directly from raw channel data prior to the application of time delays and to simultaneously generate both a segmentation map and an ultrasound B-mode image of anechoic cysts surrounded by tissue. A network trained with 17,676 Field II simulations was tested with both simulated and experimental phantom data sets that were not included during training (9,108 and 320 images, respectively). DNN results from simulated and phantom test sets produced similar dice similarity coefficients (DSC), contrast, tissue signal-to-noise ratios (SNR), and generalized contrast-to-noise ratios (GCNR). Similarity is reported as the mean ± standard deviation of these metrics for simulated and experimental test set results as follows: 0.92 ± 0.13 and 0.92 ± 0 03 DSC, respectively; −39 56 ± 6.41 dB and −35.56 ± 3.81 dB contrast, respectively; 3.78 ± 1.08 and 4.53 ± 1.23 SNR, respectively; and 1.00 ± 0.01 and 1.00 ± 0.01 GCNR, respectively. Thus, the DNNs successfully transferred feature representations learned from simulated data to experimental phantom data, highlighting the promise of this novel alternative to traditional ultrasound information extraction.

[1]  Mickael Tanter,et al.  Ultrafast imaging in biomedical ultrasound , 2014, IEEE Transactions on Ultrasonics, Ferroelectrics, and Frequency Control.

[2]  Austin Reiter,et al.  A Generative Adversarial Neural Network for Beamforming Ultrasound Images Invited Presentation , 2019, 2019 53rd Annual Conference on Information Sciences and Systems (CISS).

[3]  J. Jensen,et al.  Calculation of pressure fields from arbitrarily shaped, apodized, and excited ultrasound transducers , 1992, IEEE Transactions on Ultrasonics, Ferroelectrics and Frequency Control.

[4]  Austin Reiter,et al.  A Deep Learning Based Alternative to Beamforming Ultrasound Images , 2018, 2018 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP).

[5]  Muyinatu A. Lediju Bell,et al.  A Fully Convolutional Neural Network for Beamforming Ultrasound Images , 2018, 2018 IEEE International Ultrasonics Symposium (IUS).

[6]  Alexander M. Bronstein,et al.  Learning beamforming in ultrasound imaging , 2019, MIDL.

[7]  Thomas Brox,et al.  U-Net: Convolutional Networks for Biomedical Image Segmentation , 2015, MICCAI.

[8]  Brett Byram,et al.  Deep Neural Networks for Ultrasound Beamforming , 2018, IEEE Transactions on Medical Imaging.

[9]  H. Torp,et al.  The Generalized Contrast-to-Noise Ratio: A Formal Definition for Lesion Detectability , 2019, IEEE Transactions on Ultrasonics, Ferroelectrics, and Frequency Control.

[10]  Sergey Ioffe,et al.  Batch Normalization: Accelerating Deep Network Training by Reducing Internal Covariate Shift , 2015, ICML.

[11]  K. Boone,et al.  Effect of skin impedance on image quality and variability in electrical impedance tomography: a model study , 1996, Medical and Biological Engineering and Computing.

[12]  Dongwoon Hyun,et al.  Beamforming and Speckle Reduction Using Neural Networks , 2019, IEEE Transactions on Ultrasonics, Ferroelectrics, and Frequency Control.

[13]  Nassir Navab,et al.  Deep Learning Beamforming for Sub-Sampled Ultrasound Data , 2018, 2018 IEEE International Ultrasonics Symposium (IUS).

[14]  Jimmy Ba,et al.  Adam: A Method for Stochastic Optimization , 2014, ICLR.

[15]  Brett Byram,et al.  High dynamic range ultrasound beamforming using deep neural networks , 2019, Medical Imaging.

[16]  Andrew Zisserman,et al.  Very Deep Convolutional Networks for Large-Scale Image Recognition , 2014, ICLR.

[17]  Yonina C. Eldar,et al.  Deep Learning for Fast Adaptive Beamforming , 2019, ICASSP 2019 - 2019 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP).

[18]  J. Arendt Paper presented at the 10th Nordic-Baltic Conference on Biomedical Imaging: Field: A Program for Simulating Ultrasound Systems , 1996 .

[19]  B A Porter,et al.  Real-time spatial compound imaging: application to breast, vascular, and musculoskeletal ultrasound. , 2001, Seminars in ultrasound, CT, and MR.

[20]  Jean-Philippe Thiran,et al.  On Problem Formulation, Efficient Modeling and Deep Neural Networks for High-Quality Ultrasound Imaging : Invited Presentation , 2019, 2019 53rd Annual Conference on Information Sciences and Systems (CISS).