The mechanism of action of aldolases.

was discovered in 1952 by Racker (1) in mammalian liver and as a constitutive enzyme in Escherichiu coli. In 1958, Domagk and Horecker (2) reported the presence of a similar enzyme in extracts of cells of Lactobacillus plantarum adapted to growth on 2-deoxy-n-ribose. The properties and partial purification of this inducible enzyme were subsequently described by Pricer and Horecker (3). Previous investigations have demonstrated the interaction of rabbit muscle aldolase and yeast transaldolase with their respective substrates, dihydroxyacetone phosphate and fructose 6-phosphate, to yield Schiff base intermediates (4-7). These have been shown to involve e-amino groups of specific lysine residues of these enzymes. Reduction of the Schiff base intermediates with borohydride, followed by acid hydrolysis, permitted the isolation and identification of the reduced lysine substrate derivative, N6-/%glyceryllysine. Recently, evidence has also been obtained for similar Schiff base intermediates with the enzymes 2-keto-3-deoxy 6-phosphogluconate aldolase from Pseudomonas flzwrescens and 2-deoxy-nribose B-phosphate aldolase from L. plantarum (8). In the latter case, the reduced lysine-acetaldehyde complex has been identified as W-ethyllysine (9). In each instance it was essential to demonstrate a loss of enzyme activity following reduction with borohydride which was dependent upon the presence of the specific enzyme substrate and which did not occur with other aldehydes, including those, such as n-glyceraldehyde a-phosphate, which were capable of condensing with the Schiff base intermediates to form the aldol condensation products. In the process of testing this specificity of deoxyribose-5-P aldolase, partial enzyme inactivation after reduction with borohydride in the presence of propionaldehyde was encountered. This suggested that propion-

[1]  P. Boyer,et al.  Sulfhydryl Groups in Relation to Aldolase Structure and Catalytic Activity1 , 1957 .

[2]  F. Šorm,et al.  Regularities in The Primary Structure of Proteins , 1963 .

[3]  W. Fitch,et al.  Construction of phylogenetic trees. , 1967, Science.

[4]  F. Leuthardt,et al.  Über die Aldolase der Kaninchenleber: Molekulargewicht, Dissoziation in Untereinheiten. Über Aldolasen, 5. Mitteilung , 1965 .

[5]  R. Kuhn,et al.  Zum Stoffwechsel des Lactobacillus bifidus; die Umsetzung von radioaktiver 14C-1-Glucose , 1953 .

[6]  B. Horecker,et al.  Reversible inactivation of rabbit muscle aldolase by ophenanthroline. , 1967, Archives of biochemistry and biophysics.

[7]  F. C. Hartman,et al.  An exploration of the active site of aldolase using structural analogs of fructose diphosphate. , 1965, Biochemistry.

[8]  P. Rowley,et al.  Identity of Synthetic N6-β-Glyceryllysine and the C14-Labeled Amino Acid Obtained on Sodium Borohydride Reduction and Hydrolysis of a Complex from C14-Fructose 6-Phosphate-Transaldolase Interaction , 1963 .

[9]  H. Hiatt,et al.  Tetrose phosphate and the formation of sedoheptulose diphosphate. , 1955, The Journal of biological chemistry.

[10]  B. Horecker,et al.  The subunit structure and carboxy-terminal sequence of rabbit muscle aldolase. , 1967, Proceedings of the National Academy of Sciences of the United States of America.

[11]  B. Horecker,et al.  The molecular weight of rabbit muscle aldolase and the properties of the subunits in acid solution. , 1968, Archives of biochemistry and biophysics.

[12]  C. Lai,et al.  The function of histidine residues in rabbit muscle aldolase. , 1967, Proceedings of the National Academy of Sciences of the United States of America.

[13]  H. Hers,et al.  Le metabolisme du fructose-1-phosphate dans le foie , 1953 .

[14]  W. Wood,et al.  Pathways of carbohydrate metabolism in microorganisms. , 1955, Bacteriological reviews.

[15]  D. Herbert,et al.  Zymohexase: With an Addendum by E. C. Bate-Smith. , 1940, The Biochemical journal.

[16]  P. Boyer,et al.  A carboxypeptidase-O18-labeled water procedure for determination of CO OH-terminal residues and its application to aldolase. , 1960, Journal of Biological Chemistry.

[17]  I. A. Rose,et al.  The mechanism of the triosephosphate isomerase reaction. , 1959, The Journal of biological chemistry.

[18]  F. Leuthardt,et al.  Über Aldolasen. 1. Mitteilung. Kristallformen und Aktivität der Muskelaldolase , 1957 .

[19]  C. Lai,et al.  Organic phosphate groups in native and borohydride-reduced aldolase. , 1966, Archives of biochemistry and biophysics.

[20]  A. Mehler,et al.  Aldolase Reaction with Sugar Diphosphates , 1967, Science.

[21]  H. Lardy,et al.  The sulfhydryl groups of crystalline proteins. I. Some albumins, enzymes, and hemoglobins. , 1955, The Journal of biological chemistry.

[22]  H. Fischer,et al.  Synthese von d-Fructose und d-Sorbose aus d-Glycerinaldehyd, bzw. aus d-Glycerinaldehyd und Dioxy-aceton; über Aceton-glycerinaldehyd III , 1936 .

[23]  I. A. Rose,et al.  MECHANISM OF THE ALDOLASE REACTION. , 1965, The Journal of biological chemistry.

[24]  W. Rutter,et al.  Comparative properties of yeast and muscle aldolase. , 1961, The Journal of biological chemistry.

[25]  Horecker Bl,et al.  Deoxyribose aldolase from Lactobacillus plantarum. , 1960 .

[26]  F. Leuthardt,et al.  Der enzymatische Abbau des Fructose‐1‐phosphats in der Leber. III. Mitteilung über den Stoffwechsel der Fructose in der Leber , 1953 .

[27]  C. Markert,et al.  MULTIPLE FORMS OF ENZYMES: TISSUE, ONTOGENETIC, AND SPECIES SPECIFIC PATTERNS. , 1959, Proceedings of the National Academy of Sciences of the United States of America.

[28]  P. Boyer,et al.  The catalytic activity of carboxypeptidase-degraded aldolase. , 1959, The Journal of biological chemistry.

[29]  B. Horecker,et al.  The formation of a stable aldolase-dihydroxyacetone phosphate complex. , 1962, Biochemical and biophysical research communications.

[30]  D. Davies,et al.  A CORRELATION BETWEEN AMINO ACID COMPOSITION AND PROTEIN STRUCTURE. , 1964, Journal of molecular biology.

[31]  B. Horecker,et al.  THE MECHANISM OF ACTION OF ALDOLASES. VII. FORMATION OF A 2-METHYL-2-DEOXYPENTOSE CATALYZED BY DEOXYRIBOSE 5-PHOSPHATE ALDOLASE. , 1965, The Journal of biological chemistry.

[32]  W. Rutter,et al.  Enymic Homology. Structural and Catalytic Differentiation of Fructose Diphosphate Aldolase. , 1963 .

[33]  W. Merlevede,et al.  Initial reactions in the metabolism of D- and L-glyceraldehyde by rat liver. , 1963, The Journal of biological chemistry.

[34]  F. Leuthardt,et al.  Über die Reaktion der Muskel- und Leber-Aldolase mit »Dansylchlorid« und Acetylimidazol Über Aldolasen, 7. Mitteilung† , 1966 .

[35]  W. Wood,et al.  Evidence for Schiff base formation in enzymatic aldol condensations. , 1963, Biochemical and biophysical research communications.

[36]  P. Rowley,et al.  The mechanism of action of aldolases. III. Schiff base formation with lysine. , 1962, Biochemical and biophysical research communications.

[37]  E SANCHEZDEJIMENEZ,et al.  ON THE MECHANISM OF THE EFFECT OF IONIC STRENGTH ON CRYSTALLINE ALDOLASE ACTIVITY. , 1964, The Journal of biological chemistry.

[38]  C. Lai,et al.  THE MECHANISM OF ACTION OF ALDOLASES. 8. THE NUMBER OF COMBINING SITES IN FRUCTOSE DIPHOSPHATE ALDOLASE. , 1965, The Journal of biological chemistry.

[39]  B. Horecker,et al.  Nonidentity of subunits of rabbit muscle aldolase. , 1967, Proceedings of the National Academy of Sciences of the United States of America.

[40]  F. Wold,et al.  STUDIES ON THE CARBOXYL- AND AMINO-TERMINAL RESIDUES OF RABBIT MUSCLE ALDOLASE. , 1964, The Journal of biological chemistry.

[41]  P. Rowley,et al.  THE MECHANISM OF ACTION OF ADLOLASES. V. INACTIVATION OF FLUORO- AND CHLORODINITROBENZENE. , 1964, Archives of biochemistry and biophysics.

[42]  Y. J. Topper,et al.  Mechanism of action of aldolase and phosphotriose isomerase. , 1956, Science.

[43]  V. Jagannathan,et al.  Carbohydrate metabolism in citric acid fermentation. 4. Purification and properties of aldolase from Aspergillus niger. , 1956, The Biochemical journal.

[44]  C. Lai,et al.  Mechanism of action of aldolases. XII. Primary structure around the substrate binding site of rabbit muscle aldolase. , 1965, Archives of biochemistry and biophysics.

[45]  I. A. Rose,et al.  THE MECHANISM OF ACTION OF MUSCLE ALDOLASE1 , 1955 .

[46]  P. Bartlett,et al.  CONTROLLED FORMATION OF cis- AND trans- DECALIN-9-CARBOXYLIC ACIDS BY CARBONYLATION , 1959 .

[47]  W. Rutter,et al.  Preparation and properties of yeast aldolase. , 1961, The Journal of biological chemistry.

[48]  E. Adams,et al.  Substrate binding to hydroxyketoglutarate aldolase. , 1966, Biochemical and biophysical research communications.

[49]  P. Boyer,et al.  BINDING SITES, REACTIVATION PHENOMENA, AND POSSIBLE -S-S- GROUPS OF RABBIT MUSCLE ALDOLASE. , 1963, Biochemistry.

[50]  R. Criddle,et al.  Enzymes of the carbon cycle of photosynthesis , 1966 .

[51]  R. Crane,et al.  THE INFLUENCE OF THE METHOD OF ASSAY ON THE APPARENT SPECIFICITY OF RABBIT-LIVER ALDOLASE. , 1964, Biochimica et biophysica acta.

[52]  G. Szabolcsi,et al.  Structural changes induced by the blocking of protein SH groups. , 1961, Biochimica et biophysica acta.

[53]  W. Rutter,et al.  Comparative studies of liver and muscle aldolase. I. Effect of carboxypeptidase on catalytic activity. , 1961, The Journal of biological chemistry.

[54]  K. Schellenberg The Synthesis of Secondary and Tertiary Amines by Borohydride Reduction1 , 1963 .

[55]  S. Weinhouse,et al.  DISTINCTIVE PROPERTIES OF NATIVE AND CARBOXYPEPTIDASE-TREATED ALDOLASES OF RABBIT MUSCLE AND LIVER. , 1965, The Journal of biological chemistry.

[56]  I. Wilson,et al.  The cyanide adduct of the aldolase dihydroxyacetone phosphate imine. , 1966, The Journal of biological chemistry.

[57]  H. Lardy,et al.  Bovine liver aldolase. I. Isolation, crystallization, and some general properties. , 1958, The Journal of biological chemistry.

[58]  M. Nirenberg,et al.  Fine Structure of RNA Codewords Recognized by Bacterial, Amphibian, and Mammalian Transfer RNA , 1967, Science.

[59]  S. Udenfriend,et al.  The isotope derivative method of protein amino end-group analysis. , 1951, The Journal of biological chemistry.

[60]  P. Stumpf,et al.  The inhibition of sulfhydryl enzymes as the basis of the bactericidal action of chlorine. , 1948, Journal of bacteriology.

[61]  C R Woese,et al.  The molecular basis for the genetic code. , 1966, Proceedings of the National Academy of Sciences of the United States of America.

[62]  M. Goodman,et al.  Conformational aspects of polypeptide structure XVI. Rotatory constants, cotton effects, and ultraviolet absorption data for glutamate oligomers and co‐oligomers , 1964 .

[63]  Wood Wa,et al.  THE MECHANISM OF 2-KETO-3-DEOXY-6-PHOSPHOGLUCONIC ALDOLASE. , 1964 .

[64]  Hass Lf,et al.  ALDOLASE DISSOCIATION INTO SUBUNITS BY REACTION WITH SUCCINIC ANHYDRIDE. , 1964 .

[65]  B. Horecker,et al.  THE MECHANISM OF ACTION OF ALDOLASES. IX. NATURE OF THE GROUPS REACTIVE WITH CHLORODINITROBENZENE. , 1965, The Journal of biological chemistry.

[66]  C R Woese,et al.  Order in the genetic code. , 1965, Proceedings of the National Academy of Sciences of the United States of America.

[67]  Y. J. Topper,et al.  Spectrophotometric evidence for formation of a dihydroxyacetone phosphate-aldolase complex. , 1957, Science.

[68]  W. Rutter,et al.  COMPARATIVE STUDIES OF LIVER AND MUSCLE ALDOLASE. II. IMMUNOCHEMICAL AND CHROMATOGRAPHIC DIFFERENTIATION. , 1963, The Journal of biological chemistry.

[69]  T. Bücher,et al.  Crystallized enzymes from the myogen of rabbit skeletal muscle. , 1960, Advances in protein chemistry.

[70]  B. Horecker,et al.  Fructose 1,6-diphosphate aldolase of Candida utilis: purification and properties. , 1966, Archives of biochemistry and biophysics.

[71]  C. Lapp,et al.  Isozymes of Aldolase , 1966, Science.

[72]  C. Lowry,et al.  The molecular weights of some crystalline enzymes from muscle and yeast. I. Aldolase and D-glyceraldehyde-3-phosphate dehydrogenase. , 1956, Biochimica et biophysica acta.

[73]  W. Rutter Enzymatic Homology and Analogy in Phylogeny , 1965 .

[74]  W. Rutter,et al.  The mechanism of action of fructose diphosphate aldolase. , 1958, Biochimica et biophysica acta.

[75]  D. Feingold,et al.  SUBSTRATE SPECIFICITY OF L-RHAMNULOSE 1-PHOSPHATE ADOLASE. , 1965, Biochemical and biophysical research communications.

[76]  S. R. Pelc,et al.  Stereochemical Relationship Between Coding Triplets and Amino-Acids , 1966, Nature.

[77]  N. Kaplan,et al.  On the tissue specificity and biological significance of aldolase C in the chicken. , 1967, Biochemical and biophysical research communications.

[78]  F. Westheimer,et al.  ON THE MECHANISM OF THE ENZYMATIC DECARBOXYLATION OF ACETOACETATE1 , 1959 .

[79]  I. A. Rose The Absolute Configuration of Dihydroxyacetone Phosphate Tritiated by Aldolase Reaction1 , 1958 .

[80]  W. Rutter,et al.  ENZYME VARIANTS AND METABOLIC DIVERSIFICATION. , 1963, Advances in enzyme regulation.

[81]  F. Westheimer,et al.  Acetoacetate decarboxylase. Identification of lysine at the active site. , 1966, Biochemistry.

[82]  S. Edelstein,et al.  Ultracentrifuge studies with absorption optics. IV. Molecular weight determinations at the microgram level. , 1966, Biochemistry.

[83]  H. K. Schachman,et al.  The dissociation and reconstitution of aldolase. , 1962, Biochemistry.

[84]  S. Pontremoli,et al.  A specific interaction of pyridoxal 5′-phosphate and 6-phosphogluconic dehydrogenase☆ , 1967 .

[85]  O. Rosen,et al.  THE MECHANISM OF ACTION OF ALDOLASES. VI. CRYSTALLIZATION OF DEOXYRIBOSE 5-PHOSPHATE ALDOLASE AND THE NUMBER OF ACTIVE SITES. , 1965, The Journal of biological chemistry.

[86]  S. Weinhouse,et al.  Dietary and hormonal regulation of enzymes of fructose metabolism in rat liver. , 1966, The Journal of biological chemistry.

[87]  F. Leuthardt,et al.  Über die Spezifität der Aldolasen. IV. Mitteilung über den Stoffwechsel der Fructose in der Leber , 1954 .

[88]  J W Prothero,et al.  Correlation between the distribution of amino acids and alpha helices. , 1966, Biophysical journal.

[89]  P. Stumpf,et al.  CARBOHYDRATE METABOLISM IN HIGHER PLANTS. II. THE DISTRIBUTION OF ALDOLASE IN PLANTS , 1949 .

[90]  B. Horecker,et al.  ON THE NATURE OF THE TRANSLDOLASE-DIHYDROXYACETONE COMPLEX , 1961 .

[91]  I. A. Rose,et al.  Demonstration of the Schiff base mechanism in an aldolase reaction by oxygen exchange. , 1967, Archives of biochemistry and biophysics.

[92]  W. Rutter,et al.  Reversible dissociation of aldolase into unfolded subunits. , 1963, Biochemistry.

[93]  B. Horecker,et al.  Purification and properties of fructose diphosphate aldolase from spinach leaves. , 1967, European journal of biochemistry.

[94]  F. Westheimer,et al.  The Amine Catalysis of the Dealdolization of Diacetone Alcohol , 1938 .

[95]  D. Koshland,et al.  CORRELATION OF STRUCTURE AND FUNCTION IN ENZYME ACTION. , 1963, Science.

[96]  F. Castellino,et al.  The binding-sites of rabbit muscle aldolase. , 1966, Biochemical and biophysical research communications.

[97]  E. Knoevenagel Condensation von Malonsäure mit aromatischen Aldehyden durch Ammoniak und Amine , 1898 .

[98]  L. F. Hass,et al.  ALKALI-INDUCED STRUCTURAL CHANGES IN MUSCLE ALDOLASE. , 1963, Biochemistry.

[99]  A. Goldberg,et al.  Genetic Code: Aspects of Organization , 1966, Science.

[100]  A. Guzzo,et al.  The influence of amino-acid sequence on protein structure. , 1965, Biophysical journal.

[101]  W. Rutter,et al.  Multiple forms of fructose diphosphate aldolase in mammalian tissues. , 1966, Proceedings of the National Academy of Sciences of the United States of America.

[102]  R. D. Demoss,et al.  THE MECHANISM OF THE HETEROLACTIC FERMENTATION: A NEW ROUTE OF ETHANOL FORMATION , 1951, Journal of bacteriology.

[103]  L. H. Graf,et al.  DEMONSTRATION OF AN IRON-ACTIVATED ALDOLASE IN SONIC EXTRACTS OF BRUCELLA SUIS , 1955, Journal of bacteriology.

[104]  B. Horecker,et al.  The effect of acetylation on the activity of rabbit muscle fructose diphosphate aldolase. , 1967, Biochemical and biophysical research communications.

[105]  W. Rutter,et al.  The mechanism of action of aldolases X. The combining sites of rabbit liver aldolase , 1965 .

[106]  W. Fitch Evidence suggesting a partial, internal duplication in the ancestral gene for heme-containing globins. , 1966, Journal of molecular biology.

[107]  E. Krebs,et al.  THE REACTION OF SODIUM BOROHYDRIDE WITH MUSCLE PHOSPHORYLASE1 , 1958 .

[108]  S. Velick The interaction of enzymes with small ions; an electrophoretic and equilibrium analysis of aldolase in phosphate and acetate buffers. , 1949, The Journal of physical and colloid chemistry.

[109]  G. Russell,et al.  Partial purification and characterization of two fructose diphosphate aldolases from Chlamydomonas mundana. , 1967, Biochimica et biophysica acta.

[110]  A. Bonsignore,et al.  A coupled reaction catalyzed by the enzymes transketolase and transaldolase. , 1960, The Journal of biological chemistry.

[111]  K. Brand,et al.  Reaction of cyanide with the transaldolase-dihydroxyacetone complex. , 1968, Archives of biochemistry and biophysics.

[112]  A. Ginsburg The active sites of rabbit muscle aldolase , 1966 .

[113]  A. Ginsburg,et al.  Specific anion binding to fructose diphosphate aldolase from rabbit muscle. , 1966, Biochemistry.

[114]  I. C. Gunsalus,et al.  GLUCOSE METABOLISM OF CLOSTRIDIUM PERFRINGENS: EXISTENCE OF A METALLO-ALDOLASE , 1950, Journal of bacteriology.

[115]  K. Pedersen The Decomposition of α-Nitrocarboxylic Acids. With Some Remarks on the Decomposition of β-Ketocarboxylic Acids. , 1933 .

[116]  H. Hers La fructokinase du foie , 1952 .

[117]  M Nirenberg,et al.  RNA codewords and protein synthesis, VII. On the general nature of the RNA code. , 1965, Proceedings of the National Academy of Sciences of the United States of America.

[118]  I. A. Rose,et al.  Studies on the mechanism on the aldolase reaction; isotope exchange reactions of muscle and yeast aldolase. , 1958, The Journal of biological chemistry.

[119]  E. E. Dekker,et al.  Beef liver 2-keto-4-hydroxyglutarate aldolase: substrate stereospecificity and Schiff base formation with pyruvate and glyoxylate. , 1966, Biochemical and biophysical research communications.

[120]  B. Horecker,et al.  Function of tyrosine residues in rabbit muscle aldolase. , 1967, Archives of biochemistry and biophysics.

[121]  E. R. Blout,et al.  THE DEPENDENCE OF THE CONFORMATIONS OF SYNTHETIC POLYPEPTIDES ON AMINO ACID COMPOSITION1,2 , 1960 .

[122]  C. Tanford,et al.  The number of polypeptide chains in rabbit muscle aldolase. , 1966, Biochemistry.

[123]  T. Jukes,et al.  The repetition of homologous sequences in the polypetide chains of certain cytochromes and globins. , 1966, Proceedings of the National Academy of Sciences of the United States of America.

[124]  M. O. Dayhoff,et al.  Evolution of the Structure of Ferredoxin Based on Living Relics of Primitive Amino Acid Sequences , 1966, Science.

[125]  V. Ingram,et al.  Gene Evolution and the Hæmoglobins , 1961, Nature.

[126]  Sin-Yi He,et al.  The instability of muscle aldolase subunits in dilute alkali. , 1967 .

[127]  B. Horecker Glucose-6-phosphate dehydrogenase, the pentose phosphate cycle, and its place in carbohydrate metabolism. , 1967, American journal of clinical pathology.

[128]  F. Leuthardt,et al.  Über Aldolasen. 2. Mitteilung. Chromatographische Trennung von 1‐Phosphofructaldolase und Diphosphofructaldolase der Leber , 1957 .