Gene replacement and retrieval with recombinant M13mp bacteriophages

We have developed an allele exchange system for shuttling sequences of DNA to and from their original chromosomal loci. Cloned segments of the histidine operon of Salmonella typhimurium and the lactose operon of Escherichia coli served as target sequences and were used to develop the system. Replacement and retrieval of target sequences used the phage M13mp vectors and proceeded through an M13 lysogen intermediate. The intermediates and products of allele exchange were characterized by genetic and hybridization analyses. Several unique properties of M13 lysogens were exploited to devise positive selections to detect integration and excision. These positive selections were used to manipulate phenotypically silent alleles.

[1]  M. Gefter,et al.  DNA Replication , 2019, Advances in Experimental Medicine and Biology.

[2]  R. D. Mueller,et al.  Promoter domain mediates guanosine tetraphosphate activation of the histidine operon. , 1986, Proceedings of the National Academy of Sciences of the United States of America.

[3]  R. Kucherlapati,et al.  Sequence homology requirements for intermolecular recombination in mammalian cells. , 1986, Proceedings of the National Academy of Sciences of the United States of America.

[4]  Henry Huang,et al.  Homologous recombination in Escherichia coli: dependence on substrate length and homology. , 1986, Genetics.

[5]  D Botstein,et al.  Strategies and applications of in vitro mutagenesis. , 1985, Science.

[6]  W. Rutter,et al.  Homology requirements for recombination in Escherichia coli. , 1985, Proceedings of the National Academy of Sciences of the United States of America.

[7]  S. Elledge,et al.  Site-directed insertion and deletion mutagenesis with cloned fragments in Escherichia coli , 1985, Journal of bacteriology.

[8]  G. Ames,et al.  Analysis of promoter mutations in the histidine transport operon of Salmonella typhimurium: use of hybrid M13 bacteriophages for cloning, transformation, and sequencing , 1984, Journal of bacteriology.

[9]  P. Blum,et al.  Use of M13mp phages to study gene regulation, structure and function: cloning and recombinational analysis of genes of the Salmonella typhimurium histidine operon. , 1983, Gene.

[10]  D. Koshland,et al.  Replacement and amplification of bacterial genes with sequences altered in vitro. , 1983, Proceedings of the National Academy of Sciences of the United States of America.

[11]  D. Hanahan Studies on transformation of Escherichia coli with plasmids. , 1983, Journal of molecular biology.

[12]  E. Tuley,et al.  DNA sequence changes of mutations in the histidine operon control region that decrease attenuation. , 1983, Journal of molecular biology.

[13]  J. Messing,et al.  The making of strand-specific M13 probes. , 1982, Gene.

[14]  K. Sanderson,et al.  Influence of lipopolysaccharide and protein in the cell envelope on recipient capacity in conjugation of Salmonella typhimurium , 1981, Journal of bacteriology.

[15]  L. Bossi,et al.  Four-base codons ACCA, ACCU and ACCC are recognized by frameshift suppressor sufJ , 1981, Cell.

[16]  E. Southern Detection of specific sequences among DNA fragments separated by gel electrophoresis. , 1975, Journal of molecular biology.

[17]  R. Marco,et al.  Binding, eclipse, and penetration of the filamentous bacteriophage M13 in intact and disrupted cells. , 1974, Virology.

[18]  P. Hartman,et al.  Overproduction of hisH and hisF gene products leads to inhibition of cell cell division in Salmonella. , 1972, Canadian journal of microbiology.

[19]  D. Kingsbury,et al.  DNA polymerase as a requirement for the maintenance of the bacterial plasmid colicinogenic factor E1. , 1970, Biochemical and biophysical research communications.

[20]  H. Smith,et al.  A phage P22 gene controlling integration of prophage. , 1967, Virology.

[21]  D. Pratt,et al.  Conditional lethal mutants of the small filamentous coliphage M13. I. Isolation, complementation, cell killing, time of cistron action. , 1966, Virology.

[22]  R. Schaaper,et al.  Rapid repeated cloning of mutant lac repressor genes. , 1985, Gene.

[23]  A. Otsuka,et al.  Nucleotide sequence of the birA gene encoding the biotin operon repressor and biotin holoenzyme synthetase functions of Escherichia coli. , 1985, Gene.

[24]  P. Berg,et al.  Homologous recombination between defective neo genes in mouse 3T6 cells. , 1984, Cold Spring Harbor symposia on quantitative biology.

[25]  K. Herrmann,et al.  Amino acids : biosynthesis and genetic regulation , 1983 .

[26]  D. Botstein,et al.  Advanced bacterial genetics , 1980 .

[27]  B. Ames,et al.  The Histidine Operon of Salmonella typhimurium , 1974 .

[28]  Jeffrey H. Miller Experiments in molecular genetics , 1972 .

[29]  H. Vogel,et al.  Acetylornithinase of Escherichia coli: partial purification and some properties. , 1956, The Journal of biological chemistry.

[30]  N. Zinder Resistance to Colicins E 3 and K Induced by Infection with Bacteriophage fl , 2022 .