Computer‐aided diagnosis with potential application to rapid detection of disease outbreaks

Our objectives are to quickly interpret symptoms of emergency patients to identify likely syndromes and to improve population-wide disease outbreak detection. We constructed a database of 248 syndromes, each syndrome having an estimated probability of producing any of 85 symptoms, with some two-way, three-way, and five-way probabilities reflecting correlations among symptoms. Using these multi-way probabilities in conjunction with an iterative proportional fitting algorithm allows estimation of full conditional probabilities. Combining these conditional probabilities with misdiagnosis error rates and incidence rates via Bayes theorem, the probability of each syndrome is estimated. We tested a prototype of computer-aided differential diagnosis (CADDY) on simulated data and on more than 100 real cases, including West Nile Virus, Q fever, SARS, anthrax, plague, tularaemia and toxic shock cases. We conclude that: (1) it is important to determine whether the unrecorded positive status of a symptom means that the status is negative or that the status is unknown; (2) inclusion of misdiagnosis error rates produces more realistic results; (3) the naive Bayes classifier, which assumes all symptoms behave independently, is slightly outperformed by CADDY, which includes available multi-symptom information on correlations; as more information regarding symptom correlations becomes available, the advantage of CADDY over the naive Bayes classifier should increase; (4) overlooking low-probability, high-consequence events is less likely if the standard output summary is augmented with a list of rare syndromes that are consistent with observed symptoms, and (5) accumulating patient-level probabilities across a larger population can aid in biosurveillance for disease outbreaks.

[1]  A. Agresti,et al.  Categorical Data Analysis , 1991, International Encyclopedia of Statistical Science.

[2]  L. Rüschendorf Convergence of the iterative proportional fitting procedure , 1995 .

[3]  Timothy M. Franz,et al.  Enhancement of clinicians' diagnostic reasoning by computer-based consultation: a multisite study of 2 systems. , 1999, JAMA.

[4]  Richard Platt,et al.  Use of Automated Ambulatory-Care Encounter Records for Detection of Acute Illness Clusters, Including Potential Bioterrorism Events , 2002, Emerging infectious diseases.

[5]  T. Bodenheimer,et al.  Innovations in primary care in the United StatesCommentary: What can primary care in the United States learn from the United Kingdom? , 2003 .

[6]  P. Bartels,et al.  Expert system support using a Bayesian belief network for the classification of endometrial hyperplasia , 2002, The Journal of pathology.

[7]  Thomas Bodenheimer,et al.  A medical president , 2003, BMJ : British Medical Journal.

[8]  K. Vessal,et al.  Radiological changes in inhalation anthrax. A report of radiological and pathological correlation in two cases. , 1975, Clinical radiology.

[9]  Ludmila I. Kuncheva,et al.  On the optimality of Naïve Bayes with dependent binary features , 2006, Pattern Recognit. Lett..

[10]  C. Irvin,et al.  Syndromic analysis of computerized emergency department patients' chief complaints: an opportunity for bioterrorism and influenza surveillance. , 2003, Annals of emergency medicine.

[11]  M. Klein,et al.  Three quantitative approaches to the diagnosis of abdominal pain in children: practical applications of decision theory. , 2001, Journal of pediatric surgery.

[12]  A. Kaufmann,et al.  Inhalation anthrax in a home craftsman. , 1978, Human pathology.

[13]  C. P. Quinn,et al.  Bioterrorism-related inhalational anthrax: the first 10 cases reported in the United States. , 2001, Emerging infectious diseases.

[14]  D. Buckeridge,et al.  Systematic Review: Surveillance Systems for Early Detection of Bioterrorism-Related Diseases , 2004, Annals of Internal Medicine.

[15]  I J McKendrick,et al.  Using a Bayesian belief network to aid differential diagnosis of tropical bovine diseases. , 2000, Preventive veterinary medicine.

[16]  J. Duchin,et al.  Clinical features that differentiate hantavirus pulmonary syndrome from three other acute respiratory illnesses. , 1995, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

[17]  Arul Earnest,et al.  Use of Simple Laboratory Features to Distinguish the Early Stage of Severe Acute Respiratory Syndrome from Dengue Fever , 2004, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

[18]  Tom Burr,et al.  Modeling emergency department visit patterns for infectious disease complaints: results and application to disease surveillance , 2005, BMC Medical Informatics Decis. Mak..

[19]  J. Myers,et al.  The INTERNIST-1/QUICK MEDICAL REFERENCE project--status report. , 1986, The Western journal of medicine.

[20]  Evaluation of the Computer Program GIDEON for the Diagnosis of Fever in Patients Admitted to a Medical Service , 1998 .

[21]  T. Payne Computer decision support systems. , 2000, Chest.

[22]  David J. Spiegelhalter,et al.  Bayesian analysis in expert systems , 1993 .

[23]  D. Titterington,et al.  Comparison of Discrimination Techniques Applied to a Complex Data Set of Head Injured Patients , 1981 .

[24]  J. Pagano,et al.  Two Cases of Fatal Inhalation Anthrax, One Associated with Sarcoidosis , 1961 .

[25]  D. Pauze,et al.  Screening for inhalational anthrax due to bioterrorism: evaluating proposed screening protocols. , 2004, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

[26]  J. Seward,et al.  Chickenpox or smallpox: the use of the febrile prodrome as a distinguishing characteristic. , 2004, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

[27]  S. M. Miller,et al.  Personal digital assistant infectious diseases applications for health care professionals. , 2003, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

[28]  Cowdery Js Primary pulmonary anthrax with septicemia. , 1947 .

[29]  H. Gold Anthrax; a report of one hundred seventeen cases. , 1955, A.M.A. archives of internal medicine.

[30]  Heather Heathfield,et al.  The rise and ‘fall’ of expert systems in medicine , 1999, Expert Syst. J. Knowl. Eng..

[31]  P. Holland,et al.  Discrete Multivariate Analysis. , 1976 .

[32]  H. Mcdonald,et al.  Effects of computerized clinical decision support systems on practitioner performance and patient outcomes: a systematic review. , 2005, JAMA.

[33]  A. L. Baker,et al.  Performance of four computer-based diagnostic systems. , 1994, The New England journal of medicine.

[34]  A. Monto,et al.  Epidemiology of viral respiratory infections , 2002, The American Journal of Medicine.