Biochemical and Molecular Biological Characterization of CAC2, the Arabidopsis thaliana Gene Coding for the Biotin Carboxylase Subunit of the Plastidic Acetyl-Coenzyme A Carboxylase

The biotin carboxylase subunit of the heteromeric chloroplastic acetyl-coenzyme A carboxylase (ACCase) of Arabidopsis thaliana is coded by a single gene (CAC2), which is interrupted by 15 introns. The cDNA encodes a deduced protein of 537 amino acids with an apparent N-terminal chloroplast-targeting transit peptide. Antibodies generated to a glutathione S-transferase-CAC2 fusion protein react solely with a 51-kD polypeptide of Arabidopsis; these antibodies also inhibit ACCase activity in extracts of Arabidopsis. The entire CAC2 cDNA sequence was expressed in Escherichia coli and the resulting recombinant biotin carboxylase was enzymatically active in carboxylating free biotin. The catalytic properties of the recombinant biotin carboxylase indicate that the activity of the heteromeric ACCase may be regulated by light-/dark-induced changes in stromal pH. The CAC2 gene is maximally expressed in organs and tissues that are actively synthesizing fatty acids for membrane lipids or oil deposition. The observed expression pattern of CAC2 mirrors that previously reported for the CAC1 gene (J.-K. Choi, F. Yu, E.S. Wurtele, B.J. Nikolau [1995] Plant Physiol 109: 619–625; J. Ke, J.-K Choi, M. Smith, H.T. Horner, B.J. Nikolau, E.S. Wurtele [1997] Plant Physiol 113: 357–365), which codes for the biotin carboxyl carrier subunit of the heteromeric ACCase. This coordination is probably partially established by coordinate transcription of the two genes. This hypothesis is consistent with the finding that the CAC2 and CAC1 gene promoters share a common set of sequence motifs that may be important in guiding the transcription of these genes.

[1]  E. Wurtele,et al.  Structure of the CAC1 Gene and in Situ Characterization of Its Expression (The Arabidopsis thaliana Gene Coding for the Biotin-Containing Subunit of the Plastidic Acetyl-Coenzyme A Carboxylase) , 1997, Plant physiology.

[2]  R. Fleischmann,et al.  Complete Genome Sequence of the Methanogenic Archaeon, Methanococcus jannaschii , 1996, Science.

[3]  J. Ohlrogge,et al.  The pea chloroplast membrane-associated protein, IEP96, is a subunit of acetyl-CoA carboxylase. , 1996, The Plant journal : for cell and molecular biology.

[4]  J. Kalinowski,et al.  A Corynebacterium glutamicum gene encoding a two-domain protein similar to biotin carboxylases and biotin-carboxyl-carrier proteins , 1996, Archives of Microbiology.

[5]  J. Ohlrogge,et al.  Evidence That Isolated Chloroplasts Contain an Integrated Lipid-Synthesizing Assembly That Channels Acetate into Long-Chain Fatty Acids , 1996, Plant physiology.

[6]  M. Staver,et al.  Erythromycin production in Saccharopolyspora erythraea does not require a functional propionyl‐CoA carboxylase , 1996, Molecular microbiology.

[7]  T. Konishi,et al.  Acetyl-CoA carboxylase in higher plants: most plants other than gramineae have both the prokaryotic and the eukaryotic forms of this enzyme. , 1996, Plant & cell physiology.

[8]  D. Gardiol,et al.  The genes encoding the biotin carboxyl carrier protein and biotin carboxylase subunits of Bacillus subtilis acetyl coenzyme A carboxylase, the first enzyme of fatty acid synthesis , 1995, Journal of bacteriology.

[9]  R. Fleischmann,et al.  Whole-genome random sequencing and assembly of Haemophilus influenzae Rd. , 1995, Science.

[10]  E. Wurtele,et al.  Genomic organization of 251 kDa acetyl-CoA carboxylase genes in Arabidopsis: tandem gene duplication has made two differentially expressed isozymes. , 1995, Plant & cell physiology.

[11]  T. Konishi,et al.  The Compartmentation of Acetyl-Coenzyme A Carboxylase in Plants , 1995, Plant physiology.

[12]  J. Ohlrogge,et al.  Structural Analysis, Plastid Localization, and Expression of the Biotin Carboxylase Subunit of Acetyl-Coenzyme A Carboxylase from Tobacco , 1995, Plant physiology.

[13]  Frans,et al.  Genes Galore: A Summary of Methods for Accessing Results from Large-Scale Partial Sequencing of Anonymous Arabidopsis cDNA Clones , 1994, Plant physiology.

[14]  D. Kerr,et al.  Primary amino acid sequence and structure of human pyruvate carboxylase. , 1994, Biochimica et biophysica acta.

[15]  J. Schell,et al.  A Gene Encoding Acetyl-Coenzyme A Carboxylase from Brassica napus , 1994, Plant physiology.

[16]  R. Haselkorn,et al.  Wheat acetyl-coenzyme A carboxylase: cDNA and protein structure. , 1994, Proceedings of the National Academy of Sciences of the United States of America.

[17]  J. Ohlrogge,et al.  Structure and Expression of an Arabidopsis Acetyl-Coenzyme A Carboxylase Gene , 1994, Plant physiology.

[18]  R. Dixon,et al.  Molecular cloning, characterization, and elicitation of acetyl-CoA carboxylase from alfalfa. , 1994, Proceedings of the National Academy of Sciences of the United States of America.

[19]  P. Wheeler,et al.  Lipid synthesis in mycobacteria: characterization of the biotin carboxyl carrier protein genes from Mycobacterium leprae and M. tuberculosis , 1994, Journal of bacteriology.

[20]  T. Konishi,et al.  Compartmentalization of two forms of acetyl-CoA carboxylase in plants and the origin of their tolerance toward herbicides. , 1994, Proceedings of the National Academy of Sciences of the United States of America.

[21]  E. Wurtele,et al.  Purification and characterization of 3-methylcrotonyl-coenzyme-A carboxylase from leaves of Zea mays. , 1994, Archives of biochemistry and biophysics.

[22]  I. Furusawa,et al.  Chloroplast-encoded protein as a subunit of acetyl-CoA carboxylase in pea plant. , 1993, The Journal of biological chemistry.

[23]  E. Best,et al.  Organization and nucleotide sequences of the genes encoding the biotin carboxyl carrier protein and biotin carboxylase protein of Pseudomonas aeruginosa acetyl coenzyme A carboxylase , 1993, Journal of bacteriology.

[24]  J. Ohlrogge,et al.  Cloning and characterization of the gene that encodes acetyl-coenzyme A carboxylase in the alga Cyclotella cryptica. , 1993, The Journal of biological chemistry.

[25]  R. Haselkorn,et al.  Genes for two subunits of acetyl coenzyme A carboxylase of Anabaena sp. strain PCC 7120: biotin carboxylase and biotin carboxyl carrier protein , 1993, Journal of bacteriology.

[26]  H. Kondo,et al.  Molecular evolution of biotin-dependent carboxylases. , 1993, European journal of biochemistry.

[27]  S. Kohlwein,et al.  Acetyl-CoA carboxylase from yeast is an essential enzyme and is regulated by factors that control phospholipid metabolism. , 1993, The Journal of biological chemistry.

[28]  Joseph R. Ecker,et al.  CTR1, a negative regulator of the ethylene response pathway in arabidopsis, encodes a member of the Raf family of protein kinases , 1993, Cell.

[29]  D. L. Wyse,et al.  Characterization of Maize Acetyl-Coenzyme A Carboxylase , 1993, Plant physiology.

[30]  J. Cronan,et al.  Growth rate regulation of Escherichia coli acetyl coenzyme A carboxylase, which catalyzes the first committed step of lipid biosynthesis , 1993, Journal of bacteriology.

[31]  N. Chua,et al.  Two G-box-related sequences confer different expression patterns in transgenic tobacco. , 1992, The Plant cell.

[32]  Y. Kawagoe,et al.  Four distinct nuclear proteins recognize in vitro the proximal promoter of the bean seed storage protein beta-phaseolin gene conferring spatial and temporal control. , 1992, The Plant journal : for cell and molecular biology.

[33]  J. Rogers,et al.  Definition and functional implications of gibberellin and abscisic acid cis-acting hormone response complexes. , 1992, The Plant cell.

[34]  J. Ohlrogge,et al.  Regulation of plant Fatty Acid biosynthesis : analysis of acyl-coenzyme a and acyl-acyl carrier protein substrate pools in spinach and pea chloroplasts. , 1992, Plant physiology.

[35]  J. Cronan,et al.  The genes encoding the two carboxyltransferase subunits of Escherichia coli acetyl-CoA carboxylase. , 1992, The Journal of biological chemistry.

[36]  S. Chirala,et al.  Cloning of the yeast FAS3 gene and primary structure of yeast acetyl-CoA carboxylase. , 1992, Proceedings of the National Academy of Sciences of the United States of America.

[37]  J. Rogers,et al.  A gibberellin response complex in cereal alpha-amylase gene promoters. , 1992, The Plant cell.

[38]  J. Cronan,et al.  The gene encoding the biotin carboxylase subunit of Escherichia coli acetyl-CoA carboxylase. , 1992, The Journal of biological chemistry.

[39]  H. Kondo,et al.  Acetyl-CoA carboxylase from Escherichia coli: gene organization and nucleotide sequence of the biotin carboxylase subunit. , 1991, Proceedings of the National Academy of Sciences of the United States of America.

[40]  D. Voytas,et al.  The structure, distribution and evolution of the Ta1 retrotransposable element family of Arabidopsis thaliana. , 1990, Genetics.

[41]  R S Quatrano,et al.  A plant leucine zipper protein that recognizes an abscisic acid response element. , 1990, Science.

[42]  E. Wurtele,et al.  Plants contain multiple biotin enzymes: discovery of 3-methylcrotonyl-CoA carboxylase, propionyl-CoA carboxylase and pyruvate carboxylase in the plant kingdom. , 1990, Archives of biochemistry and biophysics.

[43]  K. Kim,et al.  Structure of the coding sequence and primary amino acid sequence of acetyl-coenzyme A carboxylase. , 1988, Proceedings of the National Academy of Sciences of the United States of America.

[44]  D. Smith,et al.  Single-step purification of polypeptides expressed in Escherichia coli as fusions with glutathione S-transferase. , 1988, Gene.

[45]  J. Brown,et al.  A catalogue of splice junction and putative branch point sequences from plant introns. , 1986, Nucleic acids research.

[46]  H. Willard,et al.  Isolation of cDNA clones coding for the alpha and beta chains of human propionyl-CoA carboxylase: chromosomal assignments and DNA polymorphisms associated with PCCA and PCCB genes. , 1986, Proceedings of the National Academy of Sciences of the United States of America.

[47]  E. Wurtele,et al.  Use of streptavidin to detect biotin-containing proteins in plants. , 1985, Analytical biochemistry.

[48]  E. Wurtele,et al.  Tissue distribution of acetyl-coenzyme a carboxylase in leaves. , 1984, Plant physiology.

[49]  P. Stumpf,et al.  Regulation of Plant Acetyl-CoA Carboxylase by Adenylate Nucleotides. , 1983, Plant physiology.

[50]  B. Nikolau,et al.  Acetyl-coenzyme A carboxylase in maize leaves. , 1981, Archives of biochemistry and biophysics.

[51]  J. Ohlrogge,et al.  Subcellular localization of acyl carrier protein in leaf protoplasts of Spinacia oleracea. , 1979, Proceedings of the National Academy of Sciences of the United States of America.

[52]  P. Cohen,et al.  The regulation of fatty acid biosynthesis , 1978, FEBS letters.

[53]  M. M. Bradford A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. , 1976, Analytical biochemistry.

[54]  J. Moss,et al.  Acetyl coenzyme A carboxylase system of Escherichia coli. Purification and properties of the biotin carboxylase, carboxyltransferase, and carboxyl carrier protein components. , 1974, The Journal of biological chemistry.

[55]  C. Fenselau,et al.  Acetyl coenzyme A carboxylase system of Escherichia coli. Site of carboxylation of biotin and enzymatic reactivity of 1'-N-(ureido)-carboxybiotin derivatives. , 1974, The Journal of biological chemistry.

[56]  C. G. Kannangara,et al.  Fat metabolism in higher plants. LIV. A procaryotic type acetyl CoA carboxylase in spinach chloroplasts. , 1972, Archives of biochemistry and biophysics.

[57]  F. Lynen Biosynthesis of saturated fatty acids. , 1961, Federation proceedings.

[58]  W. Terzaghi,et al.  Light-Regulated Transcription , 1995 .

[59]  T. Cooper,et al.  The urea amidolyase (DUR1,2) gene of Saccharomyces cerevisiae. , 1991, DNA sequence : the journal of DNA sequencing and mapping.

[60]  K. Keegstra,et al.  Chloroplastic Precursors and their Transport Across the Envelope Membranes , 1989 .

[61]  J. Harwood,et al.  Fatty Acid Metabolism , 1988 .

[62]  B. Nikolau,et al.  Purification and characterization of maize leaf acetyl-coenzyme A carboxylase. , 1984, Archives of biochemistry and biophysics.

[63]  S. Wakil,et al.  Fatty acid synthesis and its regulation. , 1983, Annual review of biochemistry.