Metagenomic analysis of cucumber rhizospheric microbiome provides insights into NaHCO3 stress mitigation by Rheinheimera pacifica NYJ

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[1]  N. Han,et al.  The evaluation of NaHCO3 stress mechanisms of grape hybrid rootstocks , 2019, Scientia Horticulturae.

[2]  Q. Shi,et al.  Streptomyces canus GLY-P2 degrades ferulic and p-hydroxybenzoic acids in soil and affects cucumber antioxidant enzyme activity and rhizosphere bacterial community , 2019, Plant and Soil.

[3]  O. Babalola,et al.  Plant health: feedback effect of root exudates-rhizobiome interactions , 2018, Applied Microbiology and Biotechnology.

[4]  Jianzhang Ma,et al.  Metagenomic analysis revealed the effects of goat milk feeding and breast feeding on the gut microbiome of Amur tiger cubs. , 2018, Biochemical and biophysical research communications.

[5]  K. Kowalski,et al.  Rhizophagy Cycle: An Oxidative Process in Plants for Nutrient Extraction from Symbiotic Microbes , 2018, Microorganisms.

[6]  Changhong Guo,et al.  Enhancement of alfalfa yield and quality by plant growth-promoting rhizobacteria under saline-alkali conditions. , 2018, Journal of the science of food and agriculture.

[7]  Xiu-Juan Wang,et al.  Bacillus methylotrophicus CSY-F1 alleviates drought stress in cucumber (Cucumis sativus) grown in soil with high ferulic acid levels , 2018, Plant and Soil.

[8]  Li Wang,et al.  Acinetobacter calcoaceticus CSY-P13 Mitigates Stress of Ferulic and p-Hydroxybenzoic Acids in Cucumber by Affecting Antioxidant Enzyme Activity and Soil Bacterial Community , 2018, Front. Microbiol..

[9]  Zhiying Wang,et al.  Biocontrol potential of saline- or alkaline-tolerant Trichoderma asperellum mutants against three pathogenic fungi under saline or alkaline stress conditions , 2018, Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology].

[10]  Shashank Gupta,et al.  Metagenomic Profiling of Soil Microbes to Mine Salt Stress Tolerance Genes , 2018, Front. Microbiol..

[11]  D. Daffonchio,et al.  Grapevine rootstocks shape underground bacterial microbiome and networking but not potential functionality , 2018, Microbiome.

[12]  M. F. Noronha,et al.  Microbial diversity of a full‐scale UASB reactor applied to poultry slaughterhouse wastewater treatment: integration of 16S rRNA gene amplicon and shotgun metagenomic sequencing , 2017, MicrobiologyOpen.

[13]  V. Gupta,et al.  Abiotic Stress Responses and Microbe-Mediated Mitigation in Plants: The Omics Strategies , 2017, Front. Plant Sci..

[14]  J. Gai,et al.  Identification and Analysis of NaHCO3 Stress Responsive Genes in Wild Soybean (Glycine soja) Roots by RNA-seq , 2016, Front. Plant Sci..

[15]  Danfeng Sun,et al.  Agricultural Soil Alkalinity and Salinity Modeling in the Cropping Season in a Spectral Endmember Space of TM in Temperate Drylands, Minqin, China , 2016, Remote. Sens..

[16]  Yuguang Du,et al.  Characterization of a cold-adapted and salt-tolerant exo-chitinase (ChiC) from Pseudoalteromonas sp. DL-6 , 2016, Extremophiles.

[17]  O. Mathieu,et al.  Shifts in microbial diversity through land use intensity as drivers of carbon mineralization in soil , 2015 .

[18]  L. Passaglia,et al.  Characterization of plant growth-promoting bacteria associated with rice cropped in iron-stressed soils , 2015, Annals of Microbiology.

[19]  Xiu-Juan Wang,et al.  Bacillus methylotrophicus isolated from the cucumber rhizosphere degrades ferulic acid in soil and affects antioxidant and rhizosphere enzyme activities , 2015, Plant and Soil.

[20]  Xiu-Juan Wang,et al.  Biodegradation of p-hydroxybenzoic acid in soil by Pseudomonas putida CSY-P1 isolated from cucumber rhizosphere soil , 2015, Plant and Soil.

[21]  J. Rousk,et al.  Salt effects on the soil microbial decomposer community and their role in organic carbon cycling: A review , 2015 .

[22]  A. Mishra,et al.  Plant growth-promoting bacteria Bacillus amyloliquefaciens NBRISN13 modulates gene expression profile of leaf and rhizosphere community in rice during salt stress. , 2013, Plant physiology and biochemistry : PPB.

[23]  Bernard R. Glick,et al.  Plant Growth-Promoting Bacteria: Mechanisms and Applications , 2012, Scientifica.

[24]  A. Dai,et al.  Exogenous cinnamic acid regulates antioxidant enzyme activity and reduces lipid peroxidation in drought-stressed cucumber leaves , 2012, Acta Physiologiae Plantarum.

[25]  C. Pieterse,et al.  Modulation of host immunity by beneficial microbes. , 2012, Molecular plant-microbe interactions : MPMI.

[26]  Jizhong Zhou,et al.  Phylogenetic Molecular Ecological Network of Soil Microbial Communities in Response to Elevated CO2 , 2011, mBio.

[27]  B. Lugtenberg,et al.  Plant-growth-promoting rhizobacteria. , 2009, Annual review of microbiology.

[28]  M. Sebastián,et al.  The alkaline phosphatase PhoX is more widely distributed in marine bacteria than the classical PhoA , 2009, The ISME Journal.

[29]  B. Krishnakumar,et al.  Phosphatase activity in anaerobic bioreactors for wastewater treatment. , 2008, Water research.

[30]  Md. Anamul Hoque,et al.  Exogenous proline and glycinebetaine increase NaCl-induced ascorbate-glutathione cycle enzyme activities, and proline improves salt tolerance more than glycinebetaine in tobacco Bright Yellow-2 suspension-cultured cells. , 2007, Journal of plant physiology.

[31]  Chun Li,et al.  The salt stress relief and growth promotion effect of Rs-5 on cotton , 2007, Plant and Soil.

[32]  T. E. Abraham,et al.  Rapid conversion of ferulic acid to 4-vinyl guaiacol and vanillin metabolites by Debaryomyces hansenii , 2007 .

[33]  B. Chance,et al.  The assay of catalases and peroxidases. , 2006, Methods of biochemical analysis.

[34]  Zhujun Zhu,et al.  Silicon alleviates salt stress and increases antioxidant enzymes activity in leaves of salt-stressed cucumber (Cucumis sativus L.) , 2004 .

[35]  Peter Millard,et al.  Unravelling rhizosphere-microbial interactions: opportunities and limitations. , 2004, Trends in microbiology.

[36]  P. J. Lea,et al.  Activity of antioxidant enzymes in response to cadmium in Crotalaria juncea , 2002, Plant and Soil.

[37]  S. Lutts,et al.  Water deficit effects on solute contribution to osmotic adjustment as a function of leaf ageing in three durum wheat (Triticum durum Desf.) cultivars performing differently in arid conditions. , 2001, Plant science : an international journal of experimental plant biology.

[38]  C. Foyer,et al.  Differential Localization of Antioxidants in Maize Leaves , 1997, Plant physiology.

[39]  T. Hernández,et al.  Biological and biochemical indicators in derelict soils subject to erosion , 1997 .

[40]  L. T. Smith,et al.  A prominent role for glucosylglycerol in the adaptation of Pseudomonas mendocina SKB70 to osmotic stress , 1994, Journal of bacteriology.

[41]  R. Bostock,et al.  Rapid In Situ Assay for Indoleacetic Acid Production by Bacteria Immobilized on a Nitrocellulose Membrane , 1991, Applied and environmental microbiology.

[42]  A. Guri.  VARIATION IN GLUTATHIONE AND ASCORBIC ACID CONTENT AMONG SELECTED CULTIVARS OF Phaseolus vulgaris PRIOR TO AND AFTER EXPOSURE TO OZONE , 1983 .

[43]  R. Dhindsa,et al.  Leaf Senescence: Correlated with Increased Levels of Membrane Permeability and Lipid Peroxidation, and Decreased Levels of Superoxide Dismutase and Catalase , 1981 .

[44]  Tokuji Shimomura,et al.  Metabolism of 1-Aminocyclopropane-1-carboxylic Acid , 1978 .

[45]  J. M. Bremner,et al.  A rapid method of evaluating different compounds as inhibitors of urease activity in soils , 1971 .

[46]  H. Barrs,et al.  A Re-Examination of the Relative Turgidity Technique for Estimating Water Deficits in Leaves , 1962 .

[47]  Xueping Chen,et al.  Biodegradation of crude oil by a defined co-culture of indigenous bacterial consortium and exogenous Bacillus subtilis. , 2017, Bioresource technology.

[48]  Juliane Jung.  Methods Of Enzymatic Analysis , 2016 .

[49]  D. Richardson,et al.  The Nitrogen Cycle: Denitrification and its Relationship to N 2 Fixation , 2005 .

[50]  Hui-wen Lin,et al.  Reduced susceptibility to waterlogging together with high-light stress is related to increases in superoxide dismutase and catalase activities in sweet potato , 2004, Plant Growth Regulation.

[51]  B. Halliwell,et al.  The presence of glutathione and glutathione reductase in chloroplasts: A proposed role in ascorbic acid metabolism , 2004, Planta.

[52]  F. Schinner,et al.  Xylanase-, CM-cellulase- and invertase activity in soil: An improved method , 1990 .

[53]  J. Neilands,et al.  Universal chemical assay for the detection and determination of siderophores. , 1987, Analytical biochemistry.