Ecogenomic responses of benthic communities under multiple stressors along the marine and adjacent riverine areas of northern Bohai Sea, China.
暂无分享,去创建一个
Xiaowei Zhang | Yonglong Lu | Tieyu Wang | John P Giesy | Jong Seong Khim | Seongjin Hong | Hongxia Yu | J. Giesy | Yonglong Lu | Xiaowei Zhang | Tieyu Wang | J. Khim | Seonjin Kim | Seongjin Hong | Jianghu Yang | Hongxia Yu | Yuwei Xie | Jianghua Yang | Yuwei Xie | Seonjin Kim
[1] A. Morgan. Sources and distribution of bay debris , 1993 .
[2] I. Telesh,et al. Life in the salinity gradient: Discovering mechanisms behind a new biodiversity pattern , 2013 .
[3] R. Knight,et al. Soil bacterial and fungal communities across a pH gradient in an arable soil , 2010, The ISME Journal.
[4] J. Martiny,et al. Microbial composition affects the functioning of estuarine sediments , 2012, The ISME Journal.
[5] Yan-Li Lei,et al. Distributions and Biomass of Benthic Ciliates, Foraminifera and Amoeboid Protists in Marine, Brackish, and Freshwater Sediments , 2014, The Journal of eukaryotic microbiology.
[6] Luis Mauricio Bini,et al. Mantel test in population genetics , 2013, Genetics and molecular biology.
[7] Peter Zuber,et al. Spatial variability overwhelms seasonal patterns in bacterioplankton communities across a river to ocean gradient , 2011, The ISME Journal.
[8] J. Giesy,et al. Mercury in coastal watersheds along the Chinese Northern Bohai and Yellow Seas. , 2012, Journal of hazardous materials.
[9] Stéphane Audic,et al. The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote Small Sub-Unit rRNA sequences with curated taxonomy , 2012, Nucleic Acids Res..
[10] M. Pusch,et al. Comparison of bacterial production in sediments, epiphyton and the pelagic zone of a lowland river , 2001 .
[11] J. Giesy,et al. Ecological risk assessment of arsenic and metals in sediments of coastal areas of northern Bohai and Yellow Seas, China , 2010, AMBIO.
[12] H. Ducklow. Microbial services: challenges for microbial ecologists in a changing world , 2008 .
[13] Philip Hugenholtz,et al. Shining a Light on Dark Sequencing: Characterising Errors in Ion Torrent PGM Data , 2013, PLoS Comput. Biol..
[14] Eske Willerslev,et al. Environmental DNA - An emerging tool in conservation for monitoring past and present biodiversity , 2015 .
[15] Paul D. Jones,et al. Sources and distribution of polychlorinated-dibenzo-p-dioxins and -dibenzofurans in soil and sediment from the Yellow Sea region of China and Korea. , 2011, Environmental pollution.
[16] Kalyan C. Mynampati,et al. Ecogenomics reveals metals and land-use pressures on microbial communities in the waterways of a megacity. , 2015, Environmental science & technology.
[17] Michel Coste,et al. Experimental toxicity and bioaccumulation of cadmium in freshwater periphytic diatoms in relation with biofilm maturity. , 2010, The Science of the total environment.
[18] E. Buskey,et al. Toxicity of dispersant Corexit 9500A and crude oil to marine microzooplankton. , 2014, Ecotoxicology and environmental safety.
[19] M. F. Dias,et al. Impact of inocula and operating conditions on the microbial community structure of two anammox reactors , 2014, Environmental technology.
[20] K. Fent. Ecotoxicological problems associated with contaminated sites. , 2003, Toxicology letters.
[21] A. Covich,et al. Global Change and the Biodiversity of Freshwater Ecosystems: Impacts on Linkages between Above-Sediment and Sediment Biota , 2000, BioScience.
[22] E. Long. Ranges in chemical concentrations in sediments associated with adverse biological effects , 1992 .
[23] V. Ranwez,et al. A new versatile primer set targeting a short fragment of the mitochondrial COI region for metabarcoding metazoan diversity: application for characterizing coral reef fish gut contents , 2013, Frontiers in Zoology.
[24] D. Kirchman,et al. Bacterial diversity, community structure and potential growth rates along an estuarine salinity gradient , 2012, The ISME Journal.
[25] R. Schwarzenbach,et al. The Challenge of Micropollutants in Aquatic Systems , 2006, Science.
[26] M. Brinke,et al. Effects of heavy metals on free-living nematodes: A multifaceted approach using growth, reproduction and behavioural assays , 2014 .
[27] J. Giesy,et al. PAHs in surface sediments from coastal and estuarine areas of the northern Bohai and Yellow Seas, China , 2012, Environmental Geochemistry and Health.
[28] W. Manz,et al. Anthropogenic pollutants affect ecosystem services of freshwater sediments: the need for a “triad plus x” approach , 2011 .
[29] C. Berney,et al. Cultivation-independent analysis reveals a shift in ciliate 18S rRNA gene diversity in a polycyclic aromatic hydrocarbon-polluted soil. , 2007, FEMS Microbiology Ecology.
[30] R. Wagemann,et al. Metal Toxicity to Algae: A Highly pH Dependent Phenomenon , 1984 .
[31] R. Mendel,et al. Physiological functions of mineral micronutrients (Cu, Zn, Mn, Fe, Ni, Mo, B, Cl). , 2009, Current opinion in plant biology.
[32] W. Norwood,et al. Implications of Cu and Ni toxicity in two members of the Hyalella azteca cryptic species complex: Mortality, growth, and bioaccumulation parameters , 2016, Environmental toxicology and chemistry.
[33] Mehrdad Hajibabaei,et al. Simultaneous assessment of the macrobiome and microbiome in a bulk sample of tropical arthropods through DNA metasystematics , 2014, Proceedings of the National Academy of Sciences.
[34] W. Traunspurger,et al. The functional response of a freshwater benthic community to cadmium pollution. , 2012, Environmental pollution.
[35] V. de Lorenzo,et al. Exploiting the genetic and biochemical capacities of bacteria for the remediation of heavy metal pollution. , 2002, FEMS microbiology reviews.
[36] S. Ye,et al. Assessment of heavy metal contamination in surface sediments of the west Guangdong coastal region, China. , 2016, Marine pollution bulletin.
[37] P. Shannon,et al. Cytoscape: a software environment for integrated models of biomolecular interaction networks. , 2003, Genome research.
[38] P. Madoni,et al. Acute toxicity of heavy metals towards freshwater ciliated protists. , 2006, Environmental pollution.
[39] William A. Walters,et al. QIIME allows analysis of high-throughput community sequencing data , 2010, Nature Methods.
[40] R. Lohmann,et al. Comparing sediment equilibrium partitioning and passive sampling techniques to estimate benthic biota PCDD/F concentrations in Newark Bay, New Jersey (U.S.A.). , 2014, Environmental pollution.
[41] Robert C. Edgar,et al. UPARSE: highly accurate OTU sequences from microbial amplicon reads , 2013, Nature Methods.
[42] M. Wainwright,et al. Effects of heavy metals on enzyme synthesis in substrate-amended river sediments , 1982, European journal of applied microbiology and biotechnology.
[43] J. Giesy,et al. HCH and DDT in Sediments from Marine and Adjacent Riverine Areas of North Bohai Sea, China , 2010, Archives of environmental contamination and toxicology.
[44] P. Wong,et al. Toxicity of a Mixture of Metals on Freshwater Algae , 1978 .
[45] Janet M. Thornton,et al. Metal ions in biological catalysis: from enzyme databases to general principles , 2008, JBIC Journal of Biological Inorganic Chemistry.
[46] M. Hoostal,et al. Local adaptation of microbial communities to heavy metal stress in polluted sediments of Lake Erie. , 2008, FEMS microbiology ecology.
[47] P. Deschamps,et al. Complex communities of small protists and unexpected occurrence of typical marine lineages in shallow freshwater systems. , 2015, Environmental microbiology.
[48] Susan M. Huse,et al. A Method for Studying Protistan Diversity Using Massively Parallel Sequencing of V9 Hypervariable Regions of Small-Subunit Ribosomal RNA Genes , 2009, PloS one.
[49] J. Giesy,et al. Using in situ bacterial communities to monitor contaminants in river sediments. , 2016, Environmental pollution.
[50] R. B. Jackson,et al. The diversity and biogeography of soil bacterial communities. , 2006, Proceedings of the National Academy of Sciences of the United States of America.
[51] Yonglong Lu,et al. Environmental concentrations and bioaccumulations of cadmium and zinc in coastal watersheds along the Chinese Northern Bohai and Yellow Seas , 2013, Environmental toxicology and chemistry.
[52] D. Persaud,et al. Guidelines for the protection and management of aquatic sediment quality in Ontario , 1993 .
[53] D. Gillan,et al. Adherent bacteria in heavy metal contaminated marine sediments , 2007, Biofouling.
[54] Eoin L. Brodie,et al. Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible with ARB , 2006, Applied and Environmental Microbiology.
[55] Jonathan Friedman,et al. Inferring Correlation Networks from Genomic Survey Data , 2012, PLoS Comput. Biol..
[56] Mark V Brown,et al. Core sediment bacteria drive community response to anthropogenic contamination over multiple environmental gradients. , 2013, Environmental microbiology.
[57] J. Claverie,et al. Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing. , 2015, Environmental microbiology.
[58] Anders F. Andersson,et al. Transitions in bacterial communities along the 2000 km salinity gradient of the Baltic Sea , 2011, The ISME Journal.
[59] M. Grote,et al. Organic chemicals jeopardize the health of freshwater ecosystems on the continental scale , 2014, Proceedings of the National Academy of Sciences.
[60] S. Agustí,et al. Polycyclic aromatic hydrocarbons alter the structure of oceanic and oligotrophic microbial food webs. , 2015, Marine pollution bulletin.
[61] R. Knight,et al. UniFrac: a New Phylogenetic Method for Comparing Microbial Communities , 2005, Applied and Environmental Microbiology.