NWChem: Past, present, and future.

Specialized computational chemistry packages have permanently reshaped the landscape of chemical and materials science by providing tools to support and guide experimental efforts and for the prediction of atomistic and electronic properties. In this regard, electronic structure packages have played a special role by using first-principle-driven methodologies to model complex chemical and materials processes. Over the past few decades, the rapid development of computing technologies and the tremendous increase in computational power have offered a unique chance to study complex transformations using sophisticated and predictive many-body techniques that describe correlated behavior of electrons in molecular and condensed phase systems at different levels of theory. In enabling these simulations, novel parallel algorithms have been able to take advantage of computational resources to address the polynomial scaling of electronic structure methods. In this paper, we briefly review the NWChem computational chemistry suite, including its history, design principles, parallel tools, current capabilities, outreach, and outlook.

T. Straatsma | V. Tipparaju | J. Nieplocha | A. Vishnu | J. Daily | J. Hammond | H. Jónsson | Z. Zhang | S. Ghosh | M. Zacharias | S. Krishnamoorthy | B. Peng | K. Kowalski | D. Bernholdt | N. Govind | E. Bylaska | M. Valiev | S. Hirata | R. Lins | M. Krishnan | T. Windus | A. Otero-de-la-Roza | J. Pittner | G. Schatz | K. Glaesemann | H. V. van Dam | T. Dunning | R. Harrison | T. Van Voorhis | T. Soares | K. Dyall | J. Nichols | W. D. de Jong | V. Anisimov | Á. Vázquez-Mayagoitia | C. Cramer | D. Truhlar | K. Tsemekhman | G. Fann | M. Dupuis | V. Helms | J. Garza | A. W. Götz | K. Vogiatzis | K. Bhaskaran-Nair | W. Shelton | N. Bauman | E. Aprá | J. Weare | K. Wolinski | D. Silverstein | L. Jensen | L. Gagliardi | K. Lopata | E. Cauët | M. Swart | Y. Alexeev | R. M. Richard | R. Kendall | R. Peverati | G. Chuev | B. Palmer | A. Marenich | J. Autschbach | A. Logsdail | T. Nakajima | D. Mejía-Rodríguez | M. Klemm | R. Atta-Fynn | A. Wong | M. Williamson | M. Jacquelin | J. Brabec | C. Yang | B. G. Johnson | H. L. Taylor | Z. Lin | S. Bogatko | L. Pollack | A. Bruner | P. Verma | D. R. Nascimento | F. Aquino | Q. Wu | A. Panyala | J. Boschen | P. Borowski | H. Früchtl | J. Becca | J. Anchell | Y. Chen | M. Deegan | S. Fischer | A. Fonari | N. Gawande | E. Hermes | K. Hirao | R. Kobayashi | V. Konkov | R. Littlefield | W. Ma | J. Martin Del Campo | J. Moore | J. Mullin | P. Nichols | T. Pirojsirikul | P. Sadayappan | D. M. A. Smith | D. Song | G. S. Thomas | O. Villa | D. Wang | Q. Yu | Y. Zhao

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[152]  J. Nichols,et al.  Orbital energy analysis with respect to LDA and self-interaction corrected exchange-only potentials , 2001 .

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[156]  T P Straatsma,et al.  Molecular structure of the outer bacterial membrane of Pseudomonas aeruginosa via classical simulation. , 2002, Biopolymers.

[157]  D. Peter Tieleman,et al.  A consistent potential energy parameter set for lipids: dipalmitoylphosphatidylcholine as a benchmark of the GROMOS96 45A3 force field , 2003, European Biophysics Journal.

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[161]  T P Straatsma,et al.  Molecular basis for microbial adhesion to geochemical surfaces: computer simulation of Pseudomonas aeruginosa adhesion to goethite. , 2003, Biophysical journal.

[162]  Jiří Pittner,et al.  Continuous transition between Brillouin-Wigner and Rayleigh-Schrödinger perturbation theory, generalized Bloch equation, and Hilbert space multireference coupled cluster , 2003 .

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[165]  M. Dupuis,et al.  An ab initio model of electron transport in hematite (α-Fe2O3) basal planes , 2003 .

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[169]  So Hirata,et al.  Combined coupled-cluster and many-body perturbation theories. , 2004, The Journal of chemical physics.

[170]  Jürgen Gauss,et al.  Calculation of excited-state properties using general coupled-cluster and configuration-interaction models. , 2004, The Journal of chemical physics.

[171]  Angel Rubio,et al.  Propagators for the time-dependent Kohn-Sham equations. , 2004, The Journal of chemical physics.

[172]  R. Martin,et al.  Electronic Structure: Basic Theory and Practical Methods , 2004 .

[173]  Thomas Bondo Pedersen,et al.  Polarizability and optical rotation calculated from the approximate coupled cluster singles and doubles CC2 linear response theory using Cholesky decompositions. , 2004, The Journal of chemical physics.

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[175]  Karol Kowalski,et al.  New coupled-cluster methods with singles, doubles, and noniterative triples for high accuracy calculations of excited electronic states. , 2004, The Journal of chemical physics.

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[178]  T. Voorhis,et al.  Direct optimization method to study constrained systems within density-functional theory , 2005 .

[179]  E. Bylaska,et al.  Kinetic Evidence for Five-Coordination in AlOH(aq)2+ Ion , 2005, Science.

[180]  Christoph van Wüllen,et al.  Accurate and efficient treatment of two-electron contributions in quasirelativistic high-order Douglas-Kroll density-functional calculations. , 2005, The Journal of chemical physics.

[181]  Henrik Rydberg,et al.  Van der Waals Density Functional Theory with Applications , 2005 .

[182]  Karol Kowalski,et al.  Extensive generalization of renormalized coupled-cluster methods. , 2005, The Journal of chemical physics.

[183]  Andrew Canning,et al.  Scaling first-principles plane-wave codes to thousands of processors , 2005, Comput. Phys. Commun..

[184]  David E. Bernholdt,et al.  Synthesis of High-Performance Parallel Programs for a Class of ab Initio Quantum Chemistry Models , 2005, Proceedings of the IEEE.

[185]  J. Greve,et al.  Abstracts of papers , 2005, Pharmaceutisch Weekblad.

[186]  T P Straatsma,et al.  Scalable molecular dynamics , 2005 .

[187]  Chris Oostenbrink,et al.  An improved nucleic acid parameter set for the GROMOS force field , 2005, J. Comput. Chem..

[188]  Roberto D. Lins,et al.  A new GROMOS force field for hexopyranose‐based carbohydrates , 2005, J. Comput. Chem..

[189]  So Hirata,et al.  Symbolic Algebra in Quantum Chemistry , 2006 .

[190]  Dhabaleswar K. Panda,et al.  High Performance Remote Memory Access Communication: The Armci Approach , 2006, Int. J. High Perform. Comput. Appl..

[191]  Qin Wu,et al.  Direct calculation of electron transfer parameters through constrained density functional theory. , 2006, The journal of physical chemistry. A.

[192]  E. Vanden-Eijnden,et al.  A temperature accelerated method for sampling free energy and determining reaction pathways in rare events simulations , 2006 .

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[197]  A. Laio,et al.  Equilibrium free energies from nonequilibrium metadynamics. , 2006, Physical Review Letters.

[198]  Jarek Nieplocha,et al.  Advances, Applications and Performance of the Global Arrays Shared Memory Programming Toolkit , 2006, Int. J. High Perform. Comput. Appl..

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