Three‐dimensional distribution of centromeric or paracentromeric heterochromatin of chromosomes 1, 7, 15 and 17 in human lymphocyte nuclei studied with light microscopic axial tomography

Light microscopic axial tomography was applied to examine the position of peri- or paracentromeric chromosomal targets in nuclei of PHA-stimulated human lymphocytes following two color fluorescence in situ hybridization with DNA probes for 1q12 and 15p or 7c and 17c. Evaluation of hybridized nuclei was performed in a glass capillary device. By turning the capillary around its longitudinal axis each nucleus could be viewed at any desired angle. To measure the true three-dimensional distance between two chromosomal targets, the nucleus was turned around until both targets were positioned in the same focal plane. Similarly, the true distance between a target region and the center of the nucleus was estimated. The results provide evidence for differences in the three-dimensional nuclear distribution of the target regions. In particular, 7c was positioned more peripherally than the other chromosomal targets. Experimental data were compared with several models for a distribution of chromosomal targets under topological constraints. These models take into account spatial limitations of the distribution of the chromosome territories which harbor the hybridized targets.

[1]  J. Hindley,et al.  Cloning of human satellite III DNA: different components are on different chromosomes. , 1979, Nucleic acids research.

[2]  Gerhard Hummer,et al.  The localization of chromosome domains in human interphase nuclei. Three‐dimensional distance determinations of fluorescence in situ hybridization signals from confocal laser scanning microscopy , 1993 .

[3]  A. Jauch,et al.  Interphase cytogenetics in paraffin embedded sections from human testicular germ cell tumor xenografts and in corresponding cultured cells. , 1989, Laboratory investigation; a journal of technical methods and pathology.

[4]  R Eils,et al.  Three-dimensional reconstruction of painted human interphase chromosomes: active and inactive X chromosome territories have similar volumes but differ in shape and surface structure , 1996, The Journal of cell biology.

[5]  R. Eils,et al.  Simulation of the distribution of chromosome targets in cell nuclei under topological constraints , 1995 .

[6]  Bernd Rinke,et al.  A versatile 2π‐tilting device for fluorescence microscopes , 1994 .

[7]  N E Morton,et al.  Parameters of the human genome. , 1991, Proceedings of the National Academy of Sciences of the United States of America.

[8]  G. Hummer,et al.  The localization of chromosome domains in human interphase nuclei. Semi‐automated two‐dimensional image acquisition and analysis of fluorescence in situ hybridization signals , 1993 .

[9]  C Cremer,et al.  A tilting device for three‐dimensional microscopy: Application to in situ imaging of interphase cell nuclei , 1992, Journal of microscopy.

[10]  I. T. Young Proof without prejudice: use of the Kolmogorov-Smirnov test for the analysis of histograms from flow systems and other sources. , 1977, The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society.

[11]  H. Willard,et al.  Molecular analysis of a deletion polymorphism in alpha satellite of human chromosome 17: evidence for homologous unequal crossing-over and subsequent fixation. , 1986, Nucleic acids research.

[12]  C Cremer,et al.  Distribution of chromosome 18 and X centric heterochromatin in the interphase nucleus of cultured human cells. , 1990, Experimental cell research.

[13]  D C Ward,et al.  Analysis of genes and chromosomes by nonisotopic in situ hybridization. , 1991, Genetic analysis, techniques and applications.

[14]  C Cremer,et al.  Role of chromosome territories in the functional compartmentalization of the cell nucleus. , 1993, Cold Spring Harbor symposia on quantitative biology.

[15]  L. Manuelidis A view of interphase chromosomes , 1990, Science.

[16]  H. Willard,et al.  Genomic organization of alpha satellite DNA on human chromosome 7: evidence for two distinct alphoid domains on a single chromosome , 1987, Molecular and cellular biology.

[17]  M. Schmid,et al.  Chromosome topology in mammalian interphase nuclei. , 1991, Experimental cell research.