Diffusible Signal Factor (DSF) Synthase RpfF of Xylella fastidiosa Is a Multifunction Protein Also Required for Response to DSF

ABSTRACT Xylella fastidiosa, like related Xanthomonas species, employs an Rpf cell-cell communication system consisting of a diffusible signal factor (DSF) synthase, RpfF, and a DSF sensor, RpfC, to coordinate expression of virulence genes. While phenotypes of a ΔrpfF strain in Xanthomonas campestris could be complemented by its own DSF, the DSF produced by X. fastidiosa (XfDSF) did not restore expression of the XfDSF-dependent genes hxfA and hxfB to a ΔrpfF strain of X. fastidiosa, suggesting that RpfF is involved in XfDSF sensing or XfDSF-dependent signaling. To test this conjecture, rpfC and rpfF of X. campestris were replaced by those of X. fastidiosa, and the contribution of each gene to the induction of a X. campestris DSF-dependent gene was assessed. As in X. fastidiosa, XfDSF-dependent signaling required both X. fastidiosa proteins RpfF and RpfC. RpfF repressed RpfC signaling activity, which in turn was derepressed by XfDSF. A mutated X. fastidiosa RpfF protein with two substitutions of glutamate to alanine in its active site was incapable of XfDSF production yet enabled a response to XfDSF, indicating that XfDSF production and the response to XfDSF are two separate functions in which RpfF is involved. This mutant was also hypervirulent to grape, demonstrating the antivirulence effects of XfDSF itself in X. fastidiosa. The Rpf system of X. fastidiosa is thus a novel example of a quorum-sensing signal synthase that is also involved in the response to the signal molecule that it synthesizes.

[1]  J. M. Dow,et al.  High-resolution transcriptional analysis of the regulatory influence of cell-to-cell signalling reveals novel genes that contribute to Xanthomonas phytopathogenesis , 2013, Molecular microbiology.

[2]  D. Trauner,et al.  Characterization of a Diffusible Signaling Factor from Xylella fastidiosa , 2013, mBio.

[3]  S. Lindow,et al.  RpfF-dependent regulon of Xylella fastidiosa. , 2012, Phytopathology.

[4]  G. Pessi,et al.  Cis-2-dodecenoic acid receptor RpfR links quorum-sensing signal perception with regulation of virulence through cyclic dimeric guanosine monophosphate turnover , 2012, Proceedings of the National Academy of Sciences.

[5]  M. Ranjan,et al.  Atypical regulation of virulence-associated functions by a diffusible signal factor in Xanthomonas oryzae pv. oryzae. , 2012, Molecular plant-microbe interactions : MPMI.

[6]  Karyn L. Newman,et al.  Contribution of rpfB to cell-to-cell signal synthesis, virulence, and vector transmission of Xylella fastidiosa. , 2012, Molecular plant-microbe interactions : MPMI.

[7]  J. Cronan,et al.  The Burkholderia cenocepacia BDSF quorum sensing fatty acid is synthesized by a bifunctional crotonase homologue having both dehydratase and thioesterase activities , 2012, Molecular microbiology.

[8]  Diffusible signal factor-mediated quorum sensing plays a central role in coordinating gene expression of Xanthomonas citri subsp. citri. , 2012, Molecular plant-microbe interactions : MPMI.

[9]  S. Kung,et al.  Natural Competence and Recombination in the Plant Pathogen Xylella fastidiosa , 2011, Applied and Environmental Microbiology.

[10]  Lian-Hui Zhang,et al.  Listening to a new language: DSF-based quorum sensing in Gram-negative bacteria. , 2011, Chemical reviews.

[11]  S. Lindow,et al.  Assessment of the process of movement of Xylella fastidiosa within susceptible and resistant grape cultivars. , 2011, Phytopathology.

[12]  Lian-Hui Zhang,et al.  Structural basis of the sensor-synthase interaction in autoinduction of the quorum sensing signal DSF biosynthesis. , 2010, Structure.

[13]  Lian-Hui Zhang,et al.  Rice bacterial blight pathogen Xanthomonas oryzae pv. oryzae produces multiple DSF-family signals in regulation of virulence factor production , 2010, BMC Microbiology.

[14]  Species-Specific Type II Restriction-Modification System of Xylella fastidiosa Temecula1 , 2010, Applied and Environmental Microbiology.

[15]  M. Igo,et al.  Chromosome-Based Genetic Complementation System for Xylella fastidiosa , 2009, Applied and Environmental Microbiology.

[16]  Reinhard Wolf,et al.  Coding-Sequence Determinants of Gene Expression in Escherichia coli , 2009 .

[17]  S. Lindow,et al.  Two Dissimilar N-Acyl-Homoserine Lactone Acylases of Pseudomonas syringae Influence Colony and Biofilm Morphology , 2008, Applied and Environmental Microbiology.

[18]  S. Belkin,et al.  Overproduction of Exopolysaccharides by an Escherichia coli K-12 rpoS Mutant in Response to Osmotic Stress , 2008, Applied and Environmental Microbiology.

[19]  Karyn L. Newman,et al.  Cell-to-cell signaling in Xylella fastidiosa suppresses movement and xylem vessel colonization in grape. , 2008, Molecular plant-microbe interactions : MPMI.

[20]  S. Lindow,et al.  Living in two worlds: the plant and insect lifestyles of Xylella fastidiosa. , 2008, Annual review of phytopathology.

[21]  S. Lindow,et al.  A cell–cell signaling sensor is required for virulence and insect transmission of Xylella fastidiosa , 2008, Proceedings of the National Academy of Sciences.

[22]  Lian-Hui Zhang,et al.  A novel DSF-like signal from Burkholderia cenocepacia interferes with Candida albicans morphological transition , 2008, The ISME Journal.

[23]  Kui Lin,et al.  Xanthomonas campestris cell–cell communication involves a putative nucleotide receptor protein Clp and a hierarchical signalling network , 2007, Molecular microbiology.

[24]  E. Carrilho,et al.  Characterization of a putative Xylella fastidiosa diffusible signal factor by HRGC-EI-MS. , 2007, Journal of mass spectrometry : JMS.

[25]  J. M. Dow,et al.  Dual Signaling Functions of the Hybrid Sensor Kinase RpfC of Xanthomonas campestris Involve Either Phosphorelay or Receiver Domain-Protein Interaction* , 2006, Journal of Biological Chemistry.

[26]  J. M. Dow,et al.  Cell-cell signaling in Xanthomonas campestris involves an HD-GYP domain protein that functions in cyclic di-GMP turnover. , 2006, Proceedings of the National Academy of Sciences of the United States of America.

[27]  J. M. Dow,et al.  Genome scale analysis of diffusible signal factor regulon in Xanthomonas campestris pv. campestris: identification of novel cell–cell communication‐dependent genes and functions , 2006, Molecular microbiology.

[28]  S. Lindow,et al.  Pseudomonas syringae genes induced during colonization of leaf surfaces. , 2005, Environmental microbiology.

[29]  B. Kirkpatrick,et al.  Identification of Xylella fastidiosa Antivirulence Genes: Hemagglutinin Adhesins Contribute to X. fastidiosa Biofilm Maturation and Colonization and Attenuate Virulence , 2005 .

[30]  Tsuey-Ching Yang,et al.  Clp upregulates transcription of engA gene encoding a virulence factor in Xanthomonas campestris by direct binding to the upstream tandem Clp sites , 2005, FEBS letters.

[31]  B. Kirkpatrick,et al.  Identification of Xylella fastidiosa antivirulence genes: hemagglutinin adhesins contribute a biofilm maturation to X. fastidios and colonization and attenuate virulence. , 2005, Molecular plant-microbe interactions : MPMI.

[32]  Karyn L. Newman,et al.  Cell-cell signaling controls Xylella fastidiosa interactions with both insects and plants. , 2004, Proceedings of the National Academy of Sciences of the United States of America.

[33]  Lian-Hui Zhang,et al.  A bacterial cell–cell communication signal with cross‐kingdom structural analogues , 2003, Molecular microbiology.

[34]  D. Hopkins,et al.  Xylella fastidiosa: Cause of Pierce's Disease of Grapevine and Other Emergent Diseases. , 2002, Plant disease.

[35]  Thomas D. Schmittgen,et al.  Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. , 2001, Methods.

[36]  J. M. Dow,et al.  A two‐component system involving an HD‐GYP domain protein links cell–cell signalling to pathogenicity gene expression in Xanthomonas campestris , 2000, Molecular microbiology.

[37]  J. M. Dow,et al.  A novel regulatory system required for pathogenicity of Xanthomonas campestris is mediated by a small diffusible signal molecule , 1997, Molecular microbiology.

[38]  D. Hopkins,et al.  Fastidious xylem-limited bacterial plant pathogens. , 1996, Annual review of phytopathology.

[39]  D. Roop,et al.  Four new derivatives of the broad-host-range cloning vector pBBR1MCS, carrying different antibiotic-resistance cassettes. , 1995, Gene.

[40]  A. Purcell,et al.  Multiplication and movement of Xylella fastidiosa within grapevine and four other plants. , 1995 .

[41]  S. Lindow,et al.  A Biological Sensor for Iron Available to Bacteria in Their Habitats on Plant Surfaces , 1994, Applied and environmental microbiology.

[42]  A. Torriani The Alkaline Phosphatase of Escherichia coli , 1974 .

[43]  King Eo,et al.  Two simple media for the demonstration of pyocyanin and fluorescin. , 1954 .

[44]  E. King,et al.  Two simple media for the demonstration of pyocyanin and fluorescin. , 1954, The Journal of laboratory and clinical medicine.