Design and implementation of a library-based information service in molecular biology and genetics at the University of Pittsburgh.

SETTING In summer 2002, the Health Sciences Library System (HSLS) at the University of Pittsburgh initiated an information service in molecular biology and genetics to assist researchers with identifying and utilizing bioinformatics tools. PROGRAM COMPONENTS This novel information service comprises hands-on training workshops and consultation on the use of bioinformatics tools. The HSLS also provides an electronic portal and networked access to public and commercial molecular biology databases and software packages. EVALUATION MECHANISMS Researcher feedback gathered during the first three years of workshops and individual consultation indicate that the information service is meeting user needs. NEXT STEPS/FUTURE DIRECTIONS The service's workshop offerings will expand to include emerging bioinformatics topics. A frequently asked questions database is also being developed to reuse advice on complex bioinformatics questions.

[1]  Etsuko N. Moriyama,et al.  Vector NTI, a balanced all-in-one sequence analysis suite , 2004, Briefings Bioinform..

[2]  Bernward Klocke,et al.  Analysis of transcriptional regulation of the small leucine rich proteoglycans. , 2004, Molecular vision.

[3]  Marek S. Skrzypek,et al.  YPDTM, PombePDTM and WormPDTM: model organism volumes of the BioKnowledgeTM Library, an integrated resource for protein information , 2001, Nucleic Acids Res..

[4]  Michael Y. Galperin The Molecular Biology Database Collection: 2005 update , 2004, Nucleic Acids Res..

[5]  Andreas D. Baxevanis,et al.  The Molecular Biology Database Collection: 2003 update , 2003, Nucleic Acids Res..

[6]  Antony V. Cox,et al.  The Ensembl Web site: mechanics of a genome browser. , 2004, Genome research.

[7]  T. Jenssen,et al.  A literature network of human genes for high-throughput analysis of gene expression , 2001 .

[8]  Gregory D. Schuler,et al.  Database resources of the National Center for Biotechnology Information: update , 2004, Nucleic acids research.

[9]  Tatiana A. Tatusova,et al.  Entrez Gene: gene-centered information at NCBI , 2004, Nucleic Acids Res..

[10]  E. Myers,et al.  Basic local alignment search tool. , 1990, Journal of molecular biology.

[11]  Thomas L. Madden,et al.  Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. , 1997, Nucleic acids research.

[12]  D S Ketchell,et al.  A library-based bioinformatics services program. , 2000, Bulletin of the Medical Library Association.

[13]  Helge-Friedrich Tippmann,et al.  Software review: Analysis for free: Comparing programs for sequence analysis , 2004, Briefings Bioinform..