Quantification of Membrane Protein Dynamics and Interactions in Plant Cells by Fluorescence Correlation Spectroscopy.

Deciphering the dynamics of protein and lipid molecules on appropriate spatial and temporal scales may shed light on protein function and membrane organization. However, traditional bulk approaches cannot unambiguously quantify the extremely diverse mobility and interactions of proteins in living cells. Fluorescence correlation spectroscopy (FCS) is a powerful technique to describe events that occur at the single-molecule level and on the nanosecond to second timescales; therefore, FCS can provide data on the heterogeneous organization of membrane systems. FCS can also be combined with other microscopy techniques, such as super-resolution techniques. More importantly, FCS is minimally invasive, which makes it an ideal approach to detect the heterogeneous distribution and dynamics of key proteins during development. In this review, we give a brief introduction about the development of FCS and summarize the significant contributions of FCS in understanding the organization of plant cell membranes and the dynamics and interactions of membrane proteins. We also discuss the potential applications of this technique in plant biology.

[1]  Hai-Tao He,et al.  Detecting nanodomains in living cell membrane by fluorescence correlation spectroscopy. , 2011, Annual review of physical chemistry.

[2]  W. Webb,et al.  Molecular dynamics in living cells observed by fluorescence correlation spectroscopy with one- and two-photon excitation. , 1999, Biophysical journal.

[3]  T. Wohland,et al.  Applications of imaging fluorescence correlation spectroscopy. , 2014, Current opinion in chemical biology.

[4]  Jinxing Lin,et al.  Single-Molecule Analysis of PIP2;1 Dynamics and Partitioning Reveals Multiple Modes of Arabidopsis Plasma Membrane Aquaporin Regulation[C][W] , 2011, Plant Cell.

[5]  Ira,et al.  Nanoscale Organization of Multiple GPI-Anchored Proteins in Living Cell Membranes , 2004, Cell.

[6]  P. Schwille,et al.  Modular scanning FCS quantifies receptor-ligand interactions in living multicellular organisms , 2009, Nature Methods.

[7]  N. Bertaux,et al.  Probing the plasma membrane organization in living cells by spot variation fluorescence correlation spectroscopy. , 2013, Methods in enzymology.

[8]  P. Schwille,et al.  Partitioning, diffusion, and ligand binding of raft lipid analogs in model and cellular plasma membranes. , 2012, Biochimica et biophysica acta.

[9]  Katharina Gaus,et al.  Quantitative Microscopy: Protein Dynamics and Membrane Organisation , 2009, Traffic.

[10]  T. Lasser,et al.  Total internal reflection fluorescence correlation spectroscopy (TIR-FCS) with low background and high count-rate per molecule. , 2005, Optics express.

[11]  P. Schwille,et al.  Fluorescence cross-correlation spectroscopy in living cells , 2006, Nature Methods.

[12]  W. Webb,et al.  Thermodynamic Fluctuations in a Reacting System-Measurement by Fluorescence Correlation Spectroscopy , 1972 .

[13]  R. Rigler,et al.  Resolution of fluorescence correlation measurements. , 1999, Biophysical journal.

[14]  W. Webb,et al.  Fluorescence correlation spectroscopy. II. An experimental realization , 1974, Biopolymers.

[15]  R. Bhat,et al.  Lipid rafts in plants , 2005, Planta.

[16]  L. Chamberlain,et al.  Lipid Rafts and the Regulation of Exocytosis , 2004, Traffic.

[17]  Jonas Ries,et al.  Fluorescence correlation spectroscopy , 2012, BioEssays : news and reviews in molecular, cellular and developmental biology.

[18]  W. Webb,et al.  Dynamics of fluorescence fluctuations in green fluorescent protein observed by fluorescence correlation spectroscopy. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[19]  Haiyang Wang,et al.  Dynamic analysis of Arabidopsis AP2 σ subunit reveals a key role in clathrin-mediated endocytosis and plant development , 2013, Development.

[20]  Mark M Davis,et al.  TCR and Lat are expressed on separate protein islands on T cell membranes and concatenate during activation , 2010, Nature Immunology.

[21]  E Neumann,et al.  Fluorescence correlation spectrometry of the interaction kinetics of tetramethylrhodamin alpha-bungarotoxin with Torpedo californica acetylcholine receptor. , 1996, Biophysical chemistry.

[22]  Xiaojuan Li,et al.  Clathrin and Membrane Microdomains Cooperatively Regulate RbohD Dynamics and Activity in Arabidopsis[C][W] , 2014, Plant Cell.

[23]  E. Drier,et al.  Design and construction of a multiwavelength, micromirror total internal reflectance fluorescence microscope , 2014, Nature Protocols.

[24]  J. Jaiswal,et al.  Imaging single events at the cell membrane. , 2007, Nature chemical biology.

[25]  R. Jahn,et al.  Discrimination between docking and fusion of liposomes reconstituted with neuronal SNARE-proteins using FCS , 2009, Proceedings of the National Academy of Sciences.

[26]  Kai Simons,et al.  Lipid Rafts As a Membrane-Organizing Principle , 2010, Science.

[27]  Hervé Rigneault,et al.  Dynamic molecular confinement in the plasma membrane by microdomains and the cytoskeleton meshwork , 2006, The EMBO journal.

[28]  Petra Schwille,et al.  Fluorescence correlation spectroscopy for the study of membrane dynamics and protein/lipid interactions. , 2008, Methods.

[29]  P. Schwille,et al.  Fluorescence correlation spectroscopy: principles and applications. , 2014, Cold Spring Harbor protocols.

[30]  A. Nakano,et al.  Photosystem II antenna phosphorylation-dependent protein diffusion determined by fluorescence correlation spectroscopy , 2013, Scientific Reports.

[31]  L. Abrami,et al.  Bacterial subversion of lipid rafts. , 2004, Current opinion in microbiology.

[32]  Conformational modulation and hydrodynamic radii of CP12 protein and its complexes probed by fluorescence correlation spectroscopy , 2014, The FEBS journal.

[33]  Eugenia Russinova,et al.  Fluorescence fluctuation analysis of Arabidopsis thaliana somatic embryogenesis receptor-like kinase and brassinosteroid insensitive 1 receptor oligomerization. , 2008, Biophysical journal.

[34]  M. Weiss,et al.  Anomalous diffusion reports on the interaction of misfolded proteins with the quality control machinery in the endoplasmic reticulum. , 2010, Biophysical journal.

[35]  Xiaojuan Li,et al.  Single-molecule fluorescence imaging to quantify membrane protein dynamics and oligomerization in living plant cells , 2015, Nature Protocols.

[36]  S W Hell,et al.  STED nanoscopy reveals molecular details of cholesterol- and cytoskeleton-modulated lipid interactions in living cells. , 2011, Biophysical journal.

[37]  Thomas Dertinger,et al.  Two-focus fluorescence correlation spectroscopy: a new tool for accurate and absolute diffusion measurements. , 2007, Chemphyschem : a European journal of chemical physics and physical chemistry.

[38]  R. Hedrich,et al.  Arabidopsis nanodomain-delimited ABA signaling pathway regulates the anion channel SLAH3 , 2013, Proceedings of the National Academy of Sciences.

[39]  M. Eigen,et al.  Sorting single molecules: application to diagnostics and evolutionary biotechnology. , 1994, Proceedings of the National Academy of Sciences of the United States of America.

[40]  F. Baluška,et al.  Spatiotemporal Dynamics of the BRI1 Receptor and its Regulation by Membrane Microdomains in Living Arabidopsis Cells. , 2015, Molecular plant.

[41]  Hai-Tao He,et al.  Raft nanodomains contribute to Akt/PKB plasma membrane recruitment and activation. , 2008, Nature chemical biology.

[42]  S. Hell,et al.  Direct observation of the nanoscale dynamics of membrane lipids in a living cell , 2009, Nature.

[43]  D. Staiger,et al.  Mutational definition of binding requirements of an hnRNP-like protein in Arabidopsis using fluorescence correlation spectroscopy. , 2014, Biochemical and biophysical research communications.

[44]  C. Eggeling,et al.  A straightforward approach for gated STED-FCS to investigate lipid membrane dynamics , 2015, Methods.

[45]  S. Grinstein,et al.  Phosphatidylserine dynamics in cellular membranes , 2012, Molecular biology of the cell.

[46]  Thorsten Wohland,et al.  Imaging fluorescence (cross-) correlation spectroscopy in live cells and organisms , 2015, Nature Protocols.

[47]  Christian Eggeling,et al.  Fast molecular tracking maps nanoscale dynamics of plasma membrane lipids , 2010, Proceedings of the National Academy of Sciences.

[48]  Jinxing Lin,et al.  Single-particle analysis reveals shutoff control of the Arabidopsis ammonium transporter AMT1;3 by clustering and internalization , 2013, Proceedings of the National Academy of Sciences.

[49]  Thorsten Wohland,et al.  Recent applications of fluorescence correlation spectroscopy in live systems , 2014, FEBS letters.

[50]  J Langowski,et al.  Anomalous diffusion of fluorescent probes inside living cell nuclei investigated by spatially-resolved fluorescence correlation spectroscopy. , 2000, Journal of molecular biology.

[51]  S. Hell,et al.  Fluorescence correlation spectroscopy with a total internal reflection fluorescence STED microscope (TIRF-STED-FCS). , 2012, Optics express.

[52]  Atsushi Miyawaki,et al.  Proteins on the move: insights gained from fluorescent protein technologies , 2011, Nature Reviews Molecular Cell Biology.

[53]  R. Blomley,et al.  Stimulated emission depletion-based raster image correlation spectroscopy reveals biomolecular dynamics in live cells , 2013, Nature Communications.

[54]  Christian Eggeling,et al.  Exploring single-molecule dynamics with fluorescence nanoscopy , 2009 .

[55]  A. Visser,et al.  In Vivo Hexamerization and Characterization of the Arabidopsis AAA ATPase CDC48A Complex Using Förster Resonance Energy Transfer-Fluorescence Lifetime Imaging Microscopy and Fluorescence Correlation Spectroscopy1[W][OA] , 2007, Plant Physiology.