α,ε-Hybrid Peptide Foldamers: Self-Assembly of Peptide with Trans Carbon–Carbon Double Bonds in the Backbone and Its Saturated Analogue

The effect of geometrically rigid trans α,β-unsaturated ε-amino acids on the structure, folding, and assembly of α,ε-hybrid peptide foldamers has been reported. From single-crystal diffraction analysis, the unsaturated tetrapeptide 1 has stapler-pin-like structure but without intramolecular hydrogen bond. The asymmetric unit has two molecules that are stabilized by multiple intermolecular hydrogen bonding interactions as well as π–π stacking interactions between the aromatic rings of 3-aminocinnamic acid. Peptide 1 does not form organogel. But on hydrogenation, peptide 1 provides the saturated α,ε-hybrid peptide foldamer 2, which forms instant gel in most of the aromatic solvents. The gel exhibits high stability. The unsaturated peptide 1 has porous microsphere morphology, but saturated analogue 2 has ribbonlike morphology. The gel has been used efficiently for removal of cationic organic pollutants from waste water.

[1]  B. Cornils foldamers , 2020, Catalysis from A to Z.

[2]  S. Nandi,et al.  Self-Healing Hydrogel from a Dipeptide and HCl Sensing , 2018, ACS omega.

[3]  S. Dey,et al.  Artificial β-Double Helices from Achiral γ-Peptides. , 2018, Angewandte Chemie.

[4]  I. Hamley,et al.  A tripeptide-based self-shrinking hydrogel for waste-water treatment: removal of toxic organic dyes and lead (Pb2+) ions. , 2017, Chemical communications.

[5]  Babatunde O Okesola,et al.  Applying low-molecular weight supramolecular gelators in an environmental setting - self-assembled gels as smart materials for pollutant removal. , 2016, Chemical Society reviews.

[6]  M. Ganesh Kumar,et al.  Non-classical Helices with cis Carbon-Carbon Double Bonds in the Backbone: Structural Features of α,γ-Hybrid Peptide Foldamers. , 2016, Angewandte Chemie.

[7]  Debasish Haldar,et al.  Solvent assisted structural diversity: supramolecular sheet and double helix of a short aromatic γ-peptide , 2015 .

[8]  Li Yu,et al.  Efficient and selective removal of dyes using imidazolium-based supramolecular gels. , 2015, ACS applied materials & interfaces.

[9]  R. Nogueira,et al.  Aquatic toxicity of dyes before and after photo-Fenton treatment. , 2014, Journal of hazardous materials.

[10]  Surajit Ghosh,et al.  Assembly of an injectable noncytotoxic peptide-based hydrogelator for sustained release of drugs. , 2014, Langmuir : the ACS journal of surfaces and colloids.

[11]  A. Appel,et al.  Electrocatalytic Oxidation of Formate with Nickel Diphosphine Dipeptide Complexes: Effect of Ligands Modified with Amino Acids , 2013 .

[12]  M. Takafuji,et al.  Amino-acid-based, lipid-directed, in situ synthesis and fabrication of gold nanoparticles on silica: a metamaterial framework with pronounced catalytic activity , 2012, Nanotechnology.

[13]  Poulami Jana,et al.  Fabrication of nanoporous material from a hydrophobic peptide , 2011 .

[14]  S. Maity,et al.  Fabrication of hollow self-assembled peptide microvesicles and transition from sphere-to-rod structure. , 2011, Langmuir : the ACS journal of surfaces and colloids.

[15]  S. Gellman,et al.  Helix formation in preorganized beta/gamma-peptide foldamers: hydrogen-bond analogy to the alpha-helix without alpha-amino acid residues. , 2010, Journal of the American Chemical Society.

[16]  S. Gellman,et al.  Stereospecific synthesis of conformationally constrained gamma-amino acids: new foldamer building blocks that support helical secondary structure. , 2009, Journal of the American Chemical Society.

[17]  C. Schmuck,et al.  Metal-free double helices from abiotic backbones. , 2009, Chemical Society reviews.

[18]  P. Balaram,et al.  Aib Residues in Peptaibiotics and Synthetic Sequences: Analysis of Nonhelical Conformations , 2008, Chemistry & biodiversity.

[19]  Lara C. Spencer,et al.  Crystallographic characterization of helical secondary structures in alpha/beta-peptides with 1:1 residue alternation. , 2008, Journal of the American Chemical Society.

[20]  A. Schepartz,et al.  Toward beta-amino acid proteins: design, synthesis, and characterization of a fifteen kilodalton beta-peptide tetramer. , 2008, Journal of the American Chemical Society.

[21]  A. Schepartz,et al.  Toward â-Amino Acid Proteins : Design , Synthesis , and Characterization of a Fifteen Kilodalton â-Peptide Tetramer , 2008 .

[22]  I. Karle,et al.  Hybrid Peptides: Expanding the β Turn in Peptide Hairpins by the Insertion of β‐, γ‐, and δ‐Residues , 2007 .

[23]  J. Leger,et al.  Proteomorphous objects from abiotic backbones. , 2007, Angewandte Chemie.

[24]  Alanna Schepartz,et al.  High-Resolution Structure of a β-Peptide Bundle , 2007 .

[25]  I. Karle,et al.  Hybrid Peptide Hairpins Containing α‐ and ω‐Amino Acids: Conformational Analysis of Decapeptides with Unsubstituted β‐, γ‐, and δ‐Residues at Positions 3 and 8 , 2006 .

[26]  Byoung-Chul Lee,et al.  Folding a nonbiological polymer into a compact multihelical structure. , 2005, Journal of the American Chemical Society.

[27]  M. Drew,et al.  Amyloid-like fibril-forming supramolecular β-sheets from a β-turn forming tripeptide containing non-coded amino acids: the crystallographic signature , 2003 .

[28]  D. Velmurugan,et al.  Peptide Design Using ω-Amino Acids: Unusual Turn Structures Nucleated by an N-Terminal Single γ-Aminobutyric Acid Residue in Short Model Peptides , 2002 .

[29]  Matthew J. Mio,et al.  A field guide to foldamers. , 2001, Chemical reviews.

[30]  P. Balaram,et al.  Design of folded peptides. , 2001, Chemical reviews.

[31]  T Robinson,et al.  Remediation of dyes in textile effluent: a critical review on current treatment technologies with a proposed alternative. , 2001, Bioresource technology.

[32]  Samuel H. Gellman,et al.  Foldamers: A Manifesto , 1998 .

[33]  I. Karle,et al.  ω-Amino Acids in Peptide Design. Crystal Structures and Solution Conformations of Peptide Helices Containing a β-Alanyl-γ-Aminobutyryl Segment , 1997 .

[34]  C. Toniolo,et al.  Comparison of the Effect of Five Guest Residues on the \beta-Sheet Conformation of Host ${(L-Val)}_n$ Oligopeptides , 1989 .

[35]  W. Denny,et al.  Potential antitumor agents. 23. 4'-(9-Acridinylamino)alkanesulfonanilide congeners bearing hydrophilic functionality. , 1977, Journal of medicinal chemistry.