Biocomputing - tools, aims, perspectives.

[1]  Evgeny Katz,et al.  Enzyme-based logic systems interfaced with signal-responsive materials and electrodes. , 2015, Chemical communications.

[2]  Vladimir Privman,et al.  Can bio‐inspired information processing steps be realized as synthetic biochemical processes? , 2014, 1411.1917.

[3]  Evgeny Katz,et al.  Majority and minority gates realized in enzyme-biocatalyzed systems integrated with logic networks and interfaced with bioelectronic systems. , 2014, The journal of physical chemistry. B.

[4]  D. Stefanovic,et al.  Exercises in Molecular Computing , 2014, Accounts of chemical research.

[5]  Igor L. Medintz,et al.  Complex logic functions implemented with quantum dot bionanophotonic circuits. , 2014, ACS applied materials & interfaces.

[6]  Jan Halámek,et al.  An enzyme-based reversible CNOT logic gate realized in a flow system. , 2014, The Analyst.

[7]  Vladimir Privman,et al.  Networked enzymatic logic gates with filtering: new theoretical modeling expressions and their experimental application. , 2013, The journal of physical chemistry. B.

[8]  Vladimir Privman,et al.  Modularity of biochemical filtering for inducing sigmoid response in both inputs in an enzymatic AND gate. , 2013, The journal of physical chemistry. B.

[9]  Vladimir Privman,et al.  A bioinspired associative memory system based on enzymatic cascades. , 2013, Chemical communications.

[10]  Vladimir Privman,et al.  Enzymatic AND logic gate with sigmoid response induced by photochemically controlled oxidation of the output. , 2013, The journal of physical chemistry. B.

[11]  Vânia F. Pais,et al.  Information processing with molecules--Quo vadis? , 2013, Chemphyschem : a European journal of chemical physics and physical chemistry.

[12]  A. Prasanna de Silva,et al.  Molecular Logic-based Computation , 2012 .

[13]  E. Katz,et al.  Molecular AND logic gate based on bacterial anaerobic respiration. , 2012, Chemical communications.

[14]  Vladimir Privman,et al.  Enzyme-based logic: OR gate with double-sigmoid filter response. , 2012, The journal of physical chemistry. B.

[15]  Y. Benenson.  Biomolecular computing systems: principles, progress and potential , 2012, Nature Reviews Genetics.

[16]  Jan Halámek,et al.  Multianalyte digital enzyme biosensors with built-in Boolean logic. , 2012, Analytical chemistry.

[17]  Vladimir Privman,et al.  Enzyme-based logic analysis of biomarkers at physiological concentrations: and gate with double-sigmoid "filter" response. , 2012, The journal of physical chemistry. B.

[18]  Vladimir Privman,et al.  Biomolecular filters for improved separation of output signals in enzyme logic systems applied to biomedical analysis. , 2011, Analytical chemistry.

[19]  Yaakov Benenson,et al.  Biocomputing: DNA computes a square root. , 2011, Nature nanotechnology.

[20]  Jehoshua Bruck,et al.  Neural network computation with DNA strand displacement cascades , 2011, Nature.

[21]  Vladimir Privman,et al.  Realization and Properties of Biochemical-Computing Biocatalytic XOR Gate Based on Enzyme Inhibition by a Substrate , 2011, The journal of physical chemistry. B.

[22]  Darko Stefanovic,et al.  Chemistry at a Higher Level of Abstraction , 2011 .

[23]  Jian Zhou,et al.  Multi-enzyme logic network architectures for assessing injuries: digital processing of biomarkers. , 2010, Molecular bioSystems.

[24]  D. Stefanovic,et al.  Training a molecular automaton to play a game. , 2010, Nature nanotechnology.

[25]  Vladimir Privman,et al.  Enzyme-Based Logic Systems for Information Processing , 2010 .

[26]  Vladimir Privman,et al.  Realization and properties of biochemical-computing biocatalytic XOR gate based on signal change. , 2010, The journal of physical chemistry. B.

[27]  Uwe Pischel,et al.  Advanced molecular logic with memory function. , 2010, Angewandte Chemie.

[28]  E. Katz,et al.  Enzyme-based NAND and NOR logic gates with modular design. , 2009, The journal of physical chemistry. B.

[29]  Y. Benenson.  RNA-based computation in live cells. , 2009, Current opinion in biotechnology.

[30]  Konrad Szaciłowski,et al.  Digital Information Processing in Molecular Systems , 2008 .

[31]  Mary A. Arugula,et al.  Network analysis of biochemical logic for noise reduction and stability: a system of three coupled enzymatic and gates. , 2008, The journal of physical chemistry. B.

[32]  Ehud Shapiro,et al.  Towards molecular computers that operate in a biological environment , 2008 .

[33]  K. Szaciłowski.  Digital information processing in molecular systems. , 2008, Chemical reviews.

[34]  E. Katz,et al.  Boolean Logic Gates that Use Enzymes as Input Signals , 2008, Chembiochem : a European journal of chemical biology.

[35]  R. Weiss,et al.  A universal RNAi-based logic evaluator that operates in mammalian cells , 2007, Nature Biotechnology.

[36]  I. Willner,et al.  Logic gates and elementary computing by enzymes. , 2006, The journal of physical chemistry. A.

[37]  John Moult,et al.  Towards computing with proteins , 2006, Proteins.

[38]  I. Willner,et al.  Elementary arithmetic operations by enzymes: a model for metabolic pathway based computing. , 2006, Angewandte Chemie.

[39]  Z. Ezziane.  DNA computing: applications and challenges , 2006 .

[40]  D. Stefanovic,et al.  Deoxyribozyme-based half-adder. , 2003, Journal of the American Chemical Society.

[41]  L M Adleman,et al.  Molecular computation of solutions to combinatorial problems. , 1994, Science.

[42]  Zehavit Dadon,et al.  Building Logic into Peptide Networks: Bottom‐Up and Top‐Down , 2011 .

[43]  Amilra De Silva,et al.  Molecular Logic and Computing (reprinted from Nature Nanotechnol. 2007, 2, 399-410) , 2009 .

[44]  Grzegorz Rozenberg,et al.  DNA computing using single-molecule hybridization detection. , 2004, Nucleic acids research.