Scan-o-matic: High-Resolution Microbial Phenomics at a Massive Scale
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Peter Dahl | Uroš Petrovič | Stig W. Omholt | Petra Kaferle | Jonas Warringer | Luciano Fernandez-Ricaud | Martin Zackrisson | Johan Hallin | Lars-Göran Ottosson | Anders Blomberg | Esteban Fernandez-Parada | Erik Ländström | Andreas Skyman | S. Omholt | A. Blomberg | Johan Hallin | J. Warringer | U. Petrovič | L. Ottosson | Peter Dahl | A. Skyman | Martin Zackrisson | Simon Stenberg | Esteban Fernandez-Parada | Erik Ländström | Luciano Fernandez-Ricaud | P. Kaferle
[1] John M. Hancock. Yeast Phenomics—Large-scale Mapping of the Genetic Basis for Organismal Traits , 2016 .
[2] L. Parts,et al. Powerful decomposition of complex traits in a diploid model , 2016, Nature Communications.
[3] Leopold Parts,et al. Predicting quantitative traits from genome and phenome with near perfect accuracy , 2015, Nature Communications.
[4] D. Wilkinson,et al. Quantitative Fitness Analysis Identifies exo1∆ and Other Suppressors or Enhancers of Telomere Defects in Schizosaccharomyces pombe , 2015, PloS one.
[5] G. Liti,et al. The fascinating and secret wild life of the budding yeast S. cerevisiae , 2015, eLife.
[6] Najaf A. Shah,et al. Yeast Phenomics: An Experimental Approach for Modeling Gene Interaction Networks that Buffer Disease , 2015, Genes.
[7] Joanna F. Sundstrom,et al. Genome-wide identification of the Fermentome; genes required for successful and timely completion of wine-like fermentation by Saccharomyces cerevisiae , 2014, BMC Genomics.
[8] Emmanuelle Gouillart,et al. scikit-image: image processing in Python , 2014, PeerJ.
[9] T. Ideker,et al. Development of Ultra-High-Density Screening Tools for Microbial “Omics” , 2014, PloS one.
[10] A. Blomberg,et al. Yeast Phenomics—Large-scale Mapping of the Genetic Basis for Organismal Traits , 2014 .
[11] Leopold Parts,et al. High-Resolution Mapping of Complex Traits with a Four-Parent Advanced Intercross Yeast Population , 2013, Genetics.
[12] R. Wilson,et al. The Next-Generation Sequencing Revolution and Its Impact on Genomics , 2013, Cell.
[13] E. Mardis. Next-generation sequencing platforms. , 2013, Annual review of analytical chemistry.
[14] L. Kruglyak,et al. Finding the sources of missing heritability in a yeast cross , 2012, Nature.
[15] C. Lawless,et al. A Quantitative Fitness Analysis Workflow , 2012, Journal of visualized experiments : JoVE.
[16] Sasha F. Levy,et al. Bet Hedging in Yeast by Heterogeneous, Age-Correlated Expression of a Stress Protectant , 2012, PLoS biology.
[17] Anders Blomberg,et al. Trait Variation in Yeast Is Defined by Population History , 2011, PLoS genetics.
[18] Tanneguy Redarce,et al. Automatic Lip-Contour Extraction and Mouth-Structure Segmentation in Images , 2011, Computing in Science & Engineering.
[19] Leopold Parts,et al. Assessing the complex architecture of polygenic traits in diverged yeast populations , 2011, Molecular ecology.
[20] Frederick S. Vizeacoumar,et al. Systematic exploration of essential yeast gene function with temperature-sensitive mutants , 2011, Nature Biotechnology.
[21] Alan M. Moses,et al. Revealing the genetic structure of a trait by sequencing a population under selection. , 2011, Genome research.
[22] Gaël Varoquaux,et al. The NumPy Array: A Structure for Efficient Numerical Computation , 2011, Computing in Science & Engineering.
[23] A. Blomberg. Measuring growth rate in high-throughput growth phenotyping. , 2011, Current opinion in biotechnology.
[24] Gary D Bader,et al. Quantitative analysis of fitness and genetic interactions in yeast on a genome scale , 2010, Nature Methods.
[25] S. Omholt,et al. Phenomics: the next challenge , 2010, Nature Reviews Genetics.
[26] A. Blomberg,et al. Sulfate Assimilation Mediates Tellurite Reduction and Toxicity in Saccharomyces cerevisiae , 2010, Eukaryotic Cell.
[27] Darren J. Wilkinson,et al. Colonyzer: automated quantification of micro-organism growth characteristics on solid agar , 2010, BMC Bioinformatics.
[28] Gary D Bader,et al. The Genetic Landscape of a Cell , 2010, Science.
[29] Anders Blomberg,et al. Investigations on light-induced stress in fluorescence microscopy using nuclear localization of the transcription factor Msn2p as a reporter. , 2009, FEMS yeast research.
[30] Daniel J. Kvitek,et al. Variations in Stress Sensitivity and Genomic Expression in Diverse S. cerevisiae Isolates , 2008, PLoS genetics.
[31] Anders Blomberg,et al. Chemogenetic fingerprinting by analysis of cellular growth dynamics , 2008, BMC chemical biology.
[32] M. Grimson,et al. Spatial-temporal modelling of bacterial colony growth on solid media. , 2008, Molecular bioSystems.
[33] Stephen Cooper,et al. Bacterial Growth and Division , 2006 .
[34] Sean R. Collins,et al. A strategy for extracting and analyzing large-scale quantitative epistatic interaction data , 2006, Genome Biology.
[35] T. Hughes,et al. Mapping pathways and phenotypes by systematic gene overexpression. , 2006, Molecular cell.
[36] Anders Blomberg,et al. High-resolution yeast phenomics resolves different physiological features in the saline response , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[37] Anders Blomberg,et al. Automated screening in environmental arrays allows analysis of quantitative phenotypic profiles in Saccharomyces cerevisiae , 2003, Yeast.
[38] M. Aigle,et al. Rvs161p and Sphingolipids Are Required for Actin Repolarization following Salt Stress , 2002, Eukaryotic Cell.
[39] Ronald W. Davis,et al. Functional profiling of the Saccharomyces cerevisiae genome , 2002, Nature.
[40] S. Hohmann. Osmotic Stress Signaling and Osmoadaptation in Yeasts , 2002, Microbiology and Molecular Biology Reviews.
[41] Gary D Bader,et al. Systematic Genetic Analysis with Ordered Arrays of Yeast Deletion Mutants , 2001, Science.
[42] H. Riezman,et al. Rvs161p and Rvs167p, the Two Yeast Amphiphysin Homologs, Function Together in Vivo * , 2001, The Journal of Biological Chemistry.
[43] A. Wagner,et al. The role of population size, pleiotropy and fitness effects of mutations in the evolution of overlapping gene functions. , 2000, Genetics.
[44] Ronald W. Davis,et al. Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis. , 1999, Science.
[45] G. Fink,et al. A Novel Mechanism of Ion Homeostasis and Salt Tolerance in Yeast: the Hal4 and Hal5 Protein Kinases Modulate the Trk1-Trk2 Potassium Transporter , 1999, Molecular and Cellular Biology.
[46] David Mosberger,et al. The SANE Scanner Interface , 1998 .
[47] J. Boeke,et al. Designer deletion strains derived from Saccharomyces cerevisiae S288C: A useful set of strains and plasmids for PCR‐mediated gene disruption and other applications , 1998, Yeast.
[48] W. J. Dickinson,et al. Marginal fitness contributions of nonessential genes in yeast. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[49] M. Cyert,et al. Calcineurin acts through the CRZ1/TCN1-encoded transcription factor to regulate gene expression in yeast. , 1997, Genes & development.
[50] L. Raamsdonk,et al. Effects of cultivation conditions on the production of heterologous α-galactosidase by Kluyveromyces lactis , 1995, Applied Microbiology and Biotechnology.
[51] S. Omholt,et al. Concerted evolution of life stage performances signals recent selection on yeast nitrogen use. , 2015, Molecular biology and evolution.
[52] I. Pylvänäinen. A Parametric Approach to Yeast Growth Curve Estimation and Standardization , 2005 .
[53] C. Glover. On the physiological role of casein kinase II in Saccharomyces cerevisiae. , 1998, Progress in nucleic acid research and molecular biology.
[54] N. Otsu. A threshold selection method from gray level histograms , 1979 .