Cell-free protein synthesis inside giant unilamellar vesicles analyzed by flow cytometry.

Lipid vesicles have been used as model cell systems, in which an in-vitro transcription-translation system (IVTT) is encapsulated to carry out intravesicular protein synthesis. Despite a large number of previous studies, a quantitative understanding of how protein synthesis inside the vesicles is affected by the lipid membrane remains elusive. This is mainly because of the heterogeneity in structural properties of the lipid vesicles used in the experiments. We investigated the effects of the phospholipid membrane on green fluorescent protein (GFP) synthesis occurring inside cell-sized giant unilamellar vesicles (GUV), which have a defined quantity of lipids relative to the reaction volume. We first developed a method to distinguish GUV from multilamellar vesicles using flow cytometry (FCM). Using this method, we investigated the time course of GFP synthesis using one of the IVTT, the PURE system, and found that phospholipid in the form of GUV has little effect on GFP synthesis based on three lines of investigation. (1) GFP synthesis inside the GUV was not dependent on the size of GUV (2) or on the fraction of cholesterol or anionic phospholipid constituting the GUV, and (3) GFP synthesis proceeded similarly in GUV and in the test tube. The present results suggest that GUV provides an ideal reaction environment that does not affect the internal biochemical reaction. On the other hand, we also found that internal GFP synthesis is strongly dependent on the chemical composition of the outer solution.

[1]  T. Yomo,et al.  Evolvability and Self-Replication of Genetic Information in Liposomes , 2011 .

[2]  Kazufumi Hosoda,et al.  Quantitative study of the structure of multilamellar giant liposomes as a container of protein synthesis reaction. , 2008, Langmuir : the ACS journal of surfaces and colloids.

[3]  A. Finkelstein,et al.  Water movement through lipid bilayers, pores, and plasma membranes : theory and reality , 1987 .

[4]  Pier Luigi Luisi,et al.  OPARIN'S REACTIONS REVISITED : ENZYMATIC SYNTHESIS OF POLY(ADENYLIC ACID) IN MICELLES AND SELF-REPRODUCING VESICLES , 1994 .

[5]  H. Bui,et al.  Liposome membrane itself can affect gene expression in the Escherichia coli cell-free translation system. , 2008, Langmuir : the ACS journal of surfaces and colloids.

[6]  A. Minton,et al.  How can biochemical reactions within cells differ from those in test tubes? , 2006, Journal of Cell Science.

[7]  Pasquale Stano,et al.  Spontaneous Crowding of Ribosomes and Proteins inside Vesicles: A Possible Mechanism for the Origin of Cell Metabolism , 2011, Chembiochem : a European journal of chemical biology.

[8]  J. Szostak,et al.  Template-directed synthesis of a genetic polymer in a model protocell , 2008, Nature.

[9]  P. Luisi,et al.  Spontaneous Protein Crowding in Liposomes: A New Vista for the Origin of Cellular Metabolism , 2010, Chembiochem : a European journal of chemical biology.

[10]  K. Yoshikawa,et al.  Protein Synthesis in Giant Liposomes Using the In Vitro Translation System of Thermococcus kodakaraensis , 2009, IEEE Transactions on NanoBioscience.

[11]  Tetsuya Yomo,et al.  Femtoliter compartment in liposomes for in vitro selection of proteins. , 2006, Analytical biochemistry.

[12]  Tetsuya Yomo,et al.  Programmed vesicle fusion triggers gene expression. , 2011, Langmuir : the ACS journal of surfaces and colloids.

[13]  Tetsuya Yomo,et al.  Quantifying epistatic interactions among the components constituting the protein translation system , 2009, Molecular systems biology.

[14]  Tetsuya Yomo,et al.  Expression of a cascading genetic network within liposomes , 2004, FEBS letters.

[15]  H. Bui,et al.  Charged liposome affects the translation and folding steps of in vitro expression of green fluorescent protein. , 2009, Journal of bioscience and bioengineering.

[16]  Alberto Diaspro,et al.  Protein synthesis in liposomes with a minimal set of enzymes. , 2007, Biochemical and biophysical research communications.

[17]  Wim E Hennink,et al.  Optimization and quantification of protein synthesis inside liposomes , 2010, Journal of liposome research.

[18]  Huan‐Xiang Zhou,et al.  Macromolecular crowding and confinement: biochemical, biophysical, and potential physiological consequences. , 2008, Annual review of biophysics.

[19]  H. Bui,et al.  Oxidative Stress Can Affect the Gene Silencing Effect of DOTAP Liposome in an In Vitro Translation System , 2011, International journal of biological sciences.

[20]  Kenichi Yoshikawa,et al.  Entrapping desired amounts of actin filaments and molecular motor proteins in giant liposomes. , 2008, Langmuir : the ACS journal of surfaces and colloids.

[21]  David A. Weitz,et al.  Production of Unilamellar Vesicles Using an Inverted Emulsion , 2003 .

[22]  Vincent Noireaux,et al.  A vesicle bioreactor as a step toward an artificial cell assembly. , 2004, Proceedings of the National Academy of Sciences of the United States of America.

[23]  Pierre-Alain Monnard,et al.  Models of primitive cellular life: polymerases and templates in liposomes , 2007, Philosophical Transactions of the Royal Society B: Biological Sciences.

[24]  T. Yomo,et al.  Chapter 2 - Detection and analysis of protein synthesis and RNA replication in giant liposomes. , 2009, Methods in enzymology.

[25]  S. Ichikawa,et al.  Enzymes inside lipid vesicles: preparation, reactivity and applications. , 2001, Biomolecular engineering.

[26]  K. Yoshikawa,et al.  Conformational transition of giant DNA in a confined space surrounded by a phospholipid membrane. , 2009, Biophysical journal.

[27]  T. Yomo,et al.  Synthesis of functional proteins within liposomes. , 2010, Methods in molecular biology.

[28]  Hirohide Saito,et al.  Time‐Resolved Tracking of a Minimum Gene Expression System Reconstituted in Giant Liposomes , 2009, Chembiochem : a European journal of chemical biology.

[29]  Y. Husimi,et al.  A novel mutant of green fluorescent protein with enhanced sensitivity for microanalysis at 488 nm excitation. , 1999, Biochemical and biophysical research communications.

[30]  Takuya Ueda,et al.  Cell-free translation reconstituted with purified components , 2001, Nature Biotechnology.

[31]  Kenichi Yoshikawa,et al.  Gene Expression within Cell‐Sized Lipid Vesicles , 2003, ChemBioChem.

[32]  Kazufumi Hosoda,et al.  Cellular compartment model for exploring the effect of the lipidic membrane on the kinetics of encapsulated biochemical reactions. , 2010, Langmuir : the ACS journal of surfaces and colloids.

[33]  Pasquale Stano,et al.  The Minimal Size of Liposome‐Based Model Cells Brings about a Remarkably Enhanced Entrapment and Protein Synthesis , 2009, Chembiochem : a European journal of chemical biology.

[34]  Masanori Fujinami,et al.  Population analysis of structural properties of giant liposomes by flow cytometry. , 2009, Langmuir : the ACS journal of surfaces and colloids.

[35]  K. Yoshikawa,et al.  ON−OFF Switching of Transcriptional Activity of Large DNA through a Conformational Transition in Cooperation with Phospholipid Membrane , 2010, Journal of the American Chemical Society.

[36]  Takuya Ueda,et al.  Protein synthesis by pure translation systems. , 2005, Methods.

[37]  Kazufumi Hosoda,et al.  Replication of Genetic Information with Self‐Encoded Replicase in Liposomes , 2008, ChemBioChem.