Joint modelling of repeated measurements and time-to-event outcomes: flexible model specification and exact likelihood inference

Random effects or shared parameter models are commonly advocated for the analysis of combined repeated measurement and event history data, including dropout from longitudinal trials. Their use in practical applications has generally been limited by computational cost and complexity, meaning that only simple special cases can be fitted by using readily available software. We propose a new approach that exploits recent distributional results for the extended skew normal family to allow exact likelihood inference for a flexible class of random-effects models. The method uses a discretization of the timescale for the time-to-event outcome, which is often unavoidable in any case when events correspond to dropout. We place no restriction on the times at which repeated measurements are made. An analysis of repeated lung function measurements in a cystic fibrosis cohort is used to illustrate the method.

[1]  Anastasios A. Tsiatis,et al.  Joint Modeling of Longitudinal and Time-to-Event Data : An Overview , 2004 .

[2]  B. Arnold Flexible univariate and multivariate models based on hidden truncation , 2009 .

[3]  T. Hothorn,et al.  Multivariate Normal and t Distributions , 2016 .

[4]  Peter J. Diggle,et al.  Random effects models for joint analysis of repeated measurement and time-to-event outcomes , 2008 .

[5]  R. Rosenheck,et al.  Joint modelling of longitudinal outcome and interval‐censored competing risk dropout in a schizophrenia clinical trial , 2012, Journal of the Royal Statistical Society. Series A,.

[6]  Dimitris Rizopoulos,et al.  Dynamic Predictions and Prospective Accuracy in Joint Models for Longitudinal and Time‐to‐Event Data , 2011, Biometrics.

[7]  G. Jasso Review of "International Encyclopedia of Statistical Sciences, edited by Samuel Kotz, Norman L. Johnson, and Campbell B. Read, New York, Wiley, 1982-1988" , 1989 .

[8]  Keith McNeil,et al.  International guidelines for the selection of lung transplant candidates. The American Society for Transplant Physicians (ASTP)/American Thoracic Society(ATS)/European Respiratory Society(ERS)/International Society for Heart and Lung Transplantation(ISHLT). , 1998, American journal of respiratory and critical care medicine.

[9]  R. Gueorguieva Random effects models for joint analysis of repeatedly measured discrete and con- tinuous outcomes , 2013 .

[10]  T. Ferguson A Course in Large Sample Theory , 1996 .

[11]  J H Albert,et al.  Sequential Ordinal Modeling with Applications to Survival Data , 2001, Biometrics.

[12]  F. Martinez,et al.  International guidelines for the selection of lung transplant candidates: 2006 update--a consensus report from the Pulmonary Scientific Council of the International Society for Heart and Lung Transplantation. , 1998, The Journal of heart and lung transplantation : the official publication of the International Society for Heart Transplantation.

[13]  M. Wulfsohn,et al.  A joint model for survival and longitudinal data measured with error. , 1997, Biometrics.

[14]  Geert Molenberghs,et al.  Shared‐Parameter Models , 2007 .

[15]  A. Azzalini The Skew‐normal Distribution and Related Multivariate Families * , 2005 .

[16]  Mark D Schluchter,et al.  Jointly modelling the relationship between survival and pulmonary function in cystic fibrosis patients , 2002, Statistics in medicine.

[17]  Niels Keiding,et al.  Statistical Models Based on Counting Processes , 1993 .

[18]  Ronald B Geskus,et al.  Which individuals make dropout informative? , 2014, Statistical methods in medical research.

[19]  Dimitris Rizopoulos,et al.  JM: An R package for the joint modelling of longitudinal and time-to-event data , 2010 .

[20]  H. Boezen,et al.  Genetic variation in TIMP1 but not MMPs predict excess FEV1 decline in two general population-based cohorts , 2011, Respiratory research.

[21]  S. Albert Paul,et al.  Shared-parameter models , 2008 .

[22]  D. Rubin,et al.  Ignorability and Coarse Data , 1991 .

[23]  Dimitris Rizopoulos,et al.  Fast fitting of joint models for longitudinal and event time data using a pseudo-adaptive Gaussian quadrature rule , 2012, Comput. Stat. Data Anal..

[24]  A. Azzalini A class of distributions which includes the normal ones , 1985 .

[25]  Peter Diggle,et al.  Understanding the natural progression in %FEV1 decline in patients with cystic fibrosis: a longitudinal study , 2012, Thorax.

[26]  R Henderson,et al.  Joint modelling of longitudinal measurements and event time data. , 2000, Biostatistics.

[27]  J. Ware,et al.  Random-effects models for longitudinal data. , 1982, Biometrics.

[28]  J. Davies,et al.  Monitoring respiratory disease severity in cystic fibrosis. , 2009, Respiratory care.

[29]  Cécile Proust-Lima,et al.  Joint latent class models for longitudinal and time-to-event data: A review , 2014, Statistical methods in medical research.