Genomic analysis of the uncultivated marine crenarchaeote Cenarchaeum symbiosum
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E. Delong | S. Hallam | C. Schleper | N. Putnam | K. Konstantinidis | P. Richardson | Junichi Sugahara | C. Preston | Yoh-ichi Watanabe | J. R. de la Torre | Yoh‐ichi Watanabe
[1] Marc Strous,et al. Archaeal nitrification in the ocean , 2006, Proceedings of the National Academy of Sciences.
[2] E. Delong,et al. Archaeal pre-mRNA splicing: a connection to hetero-oligomeric splicing endonuclease. , 2006, Biochemical and biophysical research communications.
[3] L. Aluwihare,et al. Quantifying archaeal community autotrophy in the mesopelagic ocean using natural radiocarbon. , 2006, Proceedings of the National Academy of Sciences of the United States of America.
[4] E. Delong,et al. Pathways of Carbon Assimilation and Ammonia Oxidation Suggested by Environmental Genomic Analyses of Marine Crenarchaeota , 2006, PLoS biology.
[5] E. Delong,et al. Community Genomics Among Stratified Microbial Assemblages in the Ocean's Interior , 2006, Science.
[6] John R Spear,et al. Phylogenetic diversity and ecology of environmental Archaea. , 2005, Current opinion in microbiology.
[7] Hans-Peter Klenk,et al. Novel genes for nitrite reductase and Amo-related proteins indicate a role of uncultivated mesophilic crenarchaeota in nitrogen cycling. , 2005, Environmental microbiology.
[8] Hong Li,et al. Structural characterization of the catalytic subunit of a novel RNA splicing endonuclease. , 2005, Journal of molecular biology.
[9] J. Beman,et al. Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[10] M. Könneke,et al. Isolation of an autotrophic ammonia-oxidizing marine archaeon , 2005, Nature.
[11] Konstantinos T. Konstantinidis,et al. Towards a Genome-Based Taxonomy for Prokaryotes , 2005, Journal of bacteriology.
[12] R. Masui,et al. Functional reconstitution of a crenarchaeal splicing endonuclease in vitro. , 2005, Biochemical and biophysical research communications.
[13] E. Delong,et al. Histones in Crenarchaea , 2005, Journal of bacteriology.
[14] G. Tocchini-Valentini,et al. Structure, function, and evolution of the tRNA endonucleases of Archaea: an example of subfunctionalization. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[15] C. Schleper,et al. Genomic studies of uncultivated archaea , 2005, Nature Reviews Microbiology.
[16] Ren Zhang,et al. Identification of replication origins in archaeal genomes based on the Z-curve method. , 2005, Archaea.
[17] T. Reinthaler,et al. Contribution of Archaea to Total Prokaryotic Production in the Deep Atlantic Ocean , 2005, Applied and Environmental Microbiology.
[18] K. Konstantinidis,et al. Genomic insights that advance the species definition for prokaryotes. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[19] Jacques Ravel,et al. Visualization of comparative genomic analyses by BLAST score ratio , 2005, BMC Bioinformatics.
[20] O. White,et al. Environmental Genome Shotgun Sequencing of the Sargasso Sea , 2004, Science.
[21] J. Banfield,et al. Community structure and metabolism through reconstruction of microbial genomes from the environment , 2004, Nature.
[22] S. Salzberg,et al. Versatile and open software for comparing large genomes , 2004, Genome Biology.
[23] Henri Grosjean,et al. Identification of BHB splicing motifs in intron-containing tRNAs from 18 archaea: evolutionary implications. , 2003, RNA.
[24] O. Gascuel,et al. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. , 2003, Systematic biology.
[25] Stefan Schouten,et al. Bicarbonate uptake by marine Crenarchaeota. , 2003, FEMS microbiology letters.
[26] A. V. van Duin,et al. Crenarchaeol: the characteristic core glycerol dibiphytanyl glycerol tetraether membrane lipid of cosmopolitan pelagic crenarchaeota. , 2002, Journal of lipid research.
[27] C. Acebal,et al. Consistent association of crenarchaeal Archaea with sponges of the genus Axinella , 2002 .
[28] F. Cohan. Bacterial species and speciation. , 2001, Systematic biology.
[29] E. Delong,et al. Archaeal dominance in the mesopelagic zone of the Pacific Ocean , 2001, Nature.
[30] M. Adams,et al. Phosphoenolpyruvate Synthetase from the Hyperthermophilic Archaeon Pyrococcus furiosus , 2001, Journal of bacteriology.
[31] Stefan Schouten,et al. Widespread occurrence of structurally diverse tetraether membrane lipids: evidence for the ubiquitous presence of low-temperature relatives of hyperthermophiles. , 2000, Proceedings of the National Academy of Sciences of the United States of America.
[32] Z. Kelman. The replication origin of archaea is finally revealed. , 2000, Trends in biochemical sciences.
[33] Temple F. Smith,et al. The WD repeat: a common architecture for diverse functions. , 1999, Trends in biochemical sciences.
[34] E. Delong,et al. Everything in moderation: archaea as 'non-extremophiles'. , 1998, Current opinion in genetics & development.
[35] Christina M. Preston,et al. Genomic Analysis Reveals Chromosomal Variation in Natural Populations of the Uncultured Psychrophilic ArchaeonCenarchaeum symbiosum , 1998, Journal of bacteriology.
[36] E. Delong,et al. Dibiphytanyl Ether Lipids in Nonthermophilic Crenarchaeotes , 1998, Applied and Environmental Microbiology.
[37] I. Tanaka,et al. RIBOSOMAL PROTEIN S7 , 1998 .
[38] E. Delong,et al. Characterization of a DNA polymerase from the uncultivated psychrophilic archaeon Cenarchaeum symbiosum , 1997, Journal of bacteriology.
[39] Bess B. Ward,et al. Sponge-mediated nitrification in tropical benthic communities , 1997 .
[40] N. Pace. A molecular view of microbial diversity and the biosphere. , 1997, Science.
[41] V. Ramakrishnan,et al. RIBOSOMAL PROTEIN L9 , 1997 .
[42] E. Delong,et al. Vertical distribution and phylogenetic characterization of marine planktonic Archaea in the Santa Barbara Channel , 1997, Applied and environmental microbiology.
[43] N. Pace,et al. Perspectives on archaeal diversity, thermophily and monophyly from environmental rRNA sequences. , 1996, Proceedings of the National Academy of Sciences of the United States of America.
[44] E. Delong,et al. A psychrophilic crenarchaeon inhabits a marine sponge: Cenarchaeum symbiosum gen. nov., sp. nov. , 1996, Proceedings of the National Academy of Sciences of the United States of America.
[45] E. Delong,et al. Characterization of uncultivated prokaryotes: isolation and analysis of a 40-kilobase-pair genome fragment from a planktonic marine archaeon , 1996, Journal of bacteriology.
[46] J. Thompson,et al. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. , 1994, Nucleic acids research.
[47] E. Delong,et al. High abundance of Archaea in Antarctic marine picoplankton , 1994, Nature.
[48] M. Engelhard,et al. The primary structure of halocyanin, an archaeal blue copper protein, predicts a lipid anchor for membrane fixation. , 1994, The Journal of biological chemistry.
[49] M. Engelhard,et al. Halocyanin, an archaebacterial blue copper protein (type I) from Natronobacterium pharaonis. , 1993, Biochemistry.
[50] E. Delong. Archaea in coastal marine environments. , 1992, Proceedings of the National Academy of Sciences of the United States of America.
[51] A. Davis. Novel major archaebacterial group from marine plankton , 1992, Nature.
[52] E. Myers,et al. Basic local alignment search tool. , 1990, Journal of molecular biology.
[53] O. Kandler,et al. Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya. , 1990, Proceedings of the National Academy of Sciences of the United States of America.
[54] H. Muirhead,et al. Glucose-6-phosphate isomerase. , 1981, Philosophical transactions of the Royal Society of London. Series B, Biological sciences.
[55] R. Perham,et al. Glyceraldehyde 3-phosphate dehydrogenases: I. The protein chains in glyceraldehyde 3-phosphate dehydrogenase from pig muscle , 1965 .
[56] F. Cohan. What are bacterial species? , 2002, Annual review of microbiology.
[57] D. Schomburg,et al. Orotidine-5′-phosphate decarboxylase , 1990 .