A new hybrid signal amplification strategy for ultrasensitive electrochemical detection of DNA based on enzyme-assisted target recycling and DNA supersandwich assemblies.

A highly sensitive electrochemical sequence-specific DNA detection strategy is demonstrated by coupling N.BstNB I (a nicking endonuclease)-assisted target recycling amplification with DNA supersandwich assembly signal enhancement. The proposed method avoids any extra chemical labeling steps and offers high selectivity against single-base mismatch sequences and a low detection limit down to 0.36 fM.

[1]  Genxi Li,et al.  Fabrication of a highly sensitive aptasensor for potassium with a nicking endonuclease-assisted signal amplification strategy. , 2011, Analytical chemistry.

[2]  Guonan Chen,et al.  An ultrahighly sensitive and selective electrochemical DNA sensor via nicking endonuclease assisted current change amplification. , 2010, Chemical communications.

[3]  Itamar Willner,et al.  Enzyme-Linked Amplified Electrochemical Sensing of Oligonucleotide−DNA Interactions by Means of the Precipitation of an Insoluble Product and Using Impedance Spectroscopy , 1999 .

[4]  Yi Xiao,et al.  Amplified chemiluminescence surface detection of DNA and telomerase activity using catalytic nucleic acid labels. , 2004, Analytical chemistry.

[5]  Yan Jin,et al.  Hairpin DNA probe based electrochemical biosensor using methylene blue as hybridization indicator. , 2007, Biosensors & bioelectronics.

[6]  Yun Xiang,et al.  Ultrasensitive aptamer-based protein detection via a dual amplified biocatalytic strategy. , 2010, Biosensors & bioelectronics.

[7]  Kagan Kerman,et al.  Electrochemical DNA biosensor for the detection of specific gene related to Microcystis species , 2001 .

[8]  James F. Rusling,et al.  Carbon Nanotubes for Electronic and Electrochemical Detection of Biomolecules , 2007, Advanced materials.

[9]  Chunhai Fan,et al.  Sequence-specific detection of femtomolar DNA via a chronocoulometric DNA sensor (CDS): effects of nanoparticle-mediated amplification and nanoscale control of DNA assembly at electrodes. , 2006, Journal of the American Chemical Society.

[10]  Joseph Wang,et al.  Ultrasensitive electrical biosensing of proteins and DNA: carbon-nanotube derived amplification of the recognition and transduction events. , 2004, Journal of the American Chemical Society.

[11]  E. Paleček,et al.  Electrochemistry of nucleic acids. , 2012, Chemical reviews.

[12]  Joseph D. Gong,et al.  Carbon nanotube amplification strategies for highly sensitive immunodetection of cancer biomarkers. , 2006, Journal of the American Chemical Society.

[13]  H. Ju,et al.  Quantum‐Dot‐Functionalized Poly(styrene‐co‐acrylic acid) Microbeads: Step‐Wise Self‐Assembly, Characterization, and Applications for Sub‐femtomolar Electrochemical Detection of DNA Hybridization , 2010 .

[14]  L. Blum,et al.  DNA biosensors and microarrays. , 2008, Chemical reviews.

[15]  Ryan J. White,et al.  An electrochemical supersandwich assay for sensitive and selective DNA detection in complex matrices. , 2010, Journal of the American Chemical Society.

[16]  Itamar Willner,et al.  Amplified biosensing using the horseradish peroxidase-mimicking DNAzyme as an electrocatalyst. , 2010, Analytical chemistry.

[17]  Zhengping Li,et al.  Highly sensitive determination of microRNA using target-primed and branched rolling-circle amplification. , 2009, Angewandte Chemie.

[18]  J. Savéant,et al.  High amplification rates from the association of two enzymes confined within a nanometric layer immobilized on an electrode: modeling and illustrating example. , 2006, Journal of the American Chemical Society.

[19]  Huangxian Ju,et al.  Signal amplification using functional nanomaterials for biosensing. , 2012, Chemical Society reviews.

[20]  Y. Chai,et al.  Target recycling amplification for sensitive and label-free impedimetric genosensing based on hairpin DNA and graphene/Au nanocomposites. , 2011, Chemical communications.

[21]  Y. Chai,et al.  Dual signal amplification for highly sensitive electrochemical detection of uropathogens via enzyme-based catalytic target recycling. , 2011, Biosensors & bioelectronics.

[22]  Jean-Michel Savéant,et al.  Theory and practice of enzyme bioaffinity electrodes. Chemical, enzymatic, and electrochemical amplification of in situ product detection. , 2008, Journal of the American Chemical Society.

[23]  T. G. Drummond,et al.  Electrochemical DNA sensors , 2003, Nature Biotechnology.

[24]  Chad A Mirkin,et al.  Nanostructures in biodiagnostics. , 2005, Chemical reviews.

[25]  Zhiqiang Gao,et al.  Detection of Nucleic Acids Using Enzyme‐Catalyzed Template‐Guided Deposition of Polyaniline , 2007 .

[26]  Ronghua Yang,et al.  Rolling circle amplification combined with gold nanoparticle aggregates for highly sensitive identification of single-nucleotide polymorphisms. , 2010, Analytical chemistry.

[27]  Itamar Willner,et al.  Amplified DNA detection by electrogenerated biochemiluminescence and by the catalyzed precipitation of an insoluble product on electrodes in the presence of the doxorubicin intercalator. , 2002, Angewandte Chemie.

[28]  Joseph Wang Nanomaterial-based amplified transduction of biomolecular interactions. , 2005, Small.

[29]  Min Wang,et al.  Highly sensitive electrochemical detection of cocaine on graphene/AuNP modified electrode via catalytic redox-recycling amplification. , 2012, Biosensors & bioelectronics.

[30]  Wolfgang Knoll,et al.  Detection of point mutation and insertion mutations in DNA using a quartz crystal microbalance and MutS, a mismatch binding protein. , 2004, Analytical chemistry.

[31]  C. R. Connell,et al.  Allelic discrimination by nick-translation PCR with fluorogenic probes. , 1993, Nucleic acids research.

[32]  D. Leech,et al.  Redox polymer and probe DNA tethered to gold electrodes for enzyme-amplified amperometric detection of DNA hybridization. , 2006, Analytical chemistry.

[33]  X. Xie,et al.  Enzymatic signal amplification of molecular beacons for sensitive DNA detection , 2008, Nucleic acids research.

[34]  Wei Cheng,et al.  A simple electrochemical cytosensor array for dynamic analysis of carcinoma cell surface glycans. , 2009, Angewandte Chemie.

[35]  A. Bard,et al.  Electrogenerated chemiluminescence. 77. DNA hybridization detection at high amplification with [Ru(bpy)3]2+-containing microspheres. , 2004, Analytical chemistry.

[36]  F F Bier,et al.  Zeptomole-detecting biosensor for alkaline phosphatase in an electrochemical immunoassay for 2,4-dichlorophenoxyacetic acid. , 1996, Analytical chemistry.

[37]  Long Jiang,et al.  Enhancement of DNA immobilization and hybridization on gold electrode modified by nanogold aggregates. , 2005, Biosensors & bioelectronics.