Bridging the Gap between Statistical and Biological Epistasis in Alzheimer's Disease
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[1] A. Singleton,et al. TREM2 variants in Alzheimer's disease. , 2013, The New England journal of medicine.
[2] A. Smith,et al. Synergy between the C2 allele of transferrin and the C282Y allele of the haemochromatosis gene (HFE) as risk factors for developing Alzheimer’s disease , 2004, Journal of Medical Genetics.
[3] G. Perry,et al. Iron accumulation in Alzheimer disease is a source of redox-generated free radicals. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[4] D. Allison,et al. Detection of gene x gene interactions in genome-wide association studies of human population data. , 2007, Human heredity.
[5] Benjamin F. J. Verhaaren,et al. Alzheimer's Disease Genes and Cognition in the Nondemented General Population , 2013, Biological Psychiatry.
[6] Jason H. Moore,et al. Renin-angiotensin system gene polymorphisms and coronary artery disease in a large angiographic cohort: detection of high order gene-gene interaction. , 2007, Atherosclerosis.
[7] D. G. Clark,et al. Common variants at MS 4 A 4 / MS 4 A 6 E , CD 2 AP , CD 33 and EPHA 1 are associated with late-onset Alzheimer ’ s disease , 2011 .
[8] J. Gu,et al. High-order interactions among genetic polymorphisms in nucleotide excision repair pathway genes and smoking in modulating bladder cancer risk. , 2007, Carcinogenesis.
[9] O. Combarros,et al. Interaction between HMGCR and ABCA1 cholesterol-related genes modulates Alzheimer's disease risk , 2009, Brain Research.
[10] A. Weverling-Rijnsburger,et al. Patients with Alzheimer's disease display a pro-inflammatory phenotype , 2001, Experimental Gerontology.
[11] J. Haines,et al. Genome-Wide Association Study of Late-Onset Alzheimer Disease Identifies Disease-Associated Variants in MS4A4/MS4A6E, CD2AP, CD33, and EPHA1 , 2011, Alzheimer's & Dementia.
[12] J. Connor,et al. A histochemical study of iron, transferrin, and ferritin in Alzheimer's diseased brains , 1992, Journal of neuroscience research.
[13] G. Wong,et al. Gene-gene interactions for asthma and plasma total IgE concentration in Chinese children. , 2006, The Journal of allergy and clinical immunology.
[14] H He,et al. Pair-Wise Multifactor Dimensionality Reduction Method to Detect Gene-Gene Interactions in A Case-Control Study , 2009, Human Heredity.
[15] M. Owen,et al. Suggestive synergy between genetic variants in TF and HFE as risk factors for Alzheimer's disease , 2009, American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics.
[16] Susan E Hodge,et al. Non-replication of association studies: “pseudo-failures” to replicate? , 2007, Genetics in Medicine.
[17] A. Singleton,et al. TREM2 Variants in Alz hei mer's Disease , 2012 .
[18] R. Loewith,et al. Plasma membrane stress induces relocalization of Slm proteins and activation of TORC2 to promote sphingolipid synthesis , 2012, Nature Cell Biology.
[19] Qiang Yang,et al. BOOST: A fast approach to detecting gene-gene interactions in genome-wide case-control studies , 2010, American journal of human genetics.
[20] R. Elston,et al. Identification of gene‐gene interactions in the presence of missing data using the multifactor dimensionality reduction method , 2009, Genetic epidemiology.
[21] N. Craddock,et al. Polymorphism in AACT gene may lower age of onset of Alzheimer's disease , 1996, Neuroreport.
[22] Nick C Fox,et al. Common variants in ABCA7, MS4A6A/MS4A4E, EPHA1, CD33 and CD2AP are associated with Alzheimer’s disease , 2011, Nature Genetics.
[23] David B Allison,et al. "Are we there yet?": Deciding when one has demonstrated specific genetic causation in complex diseases and quantitative traits. , 2003, American journal of human genetics.
[24] H. Drexel,et al. Synergistic effects of the apolipoprotein E epsilon3/epsilon2/epsilon4, the cholesteryl ester transfer protein TaqIB, and the apolipoprotein C3 -482 C>T polymorphisms on their association with coronary artery disease. , 2008, Atherosclerosis.
[25] Mario Cortina-Borja,et al. Open Access Journal of Neuroinflammation Replication by the Epistasis Project of the Interaction between the Genes for Il-6 and Il-10 in the Risk of Alzheimer's Disease , 2022 .
[26] P. Crane,et al. Alzheimer’s Disease: Analyzing the Missing Heritability , 2013, PloS one.
[27] H. Soininen,et al. Butyrylcholinesterase K variant and apolipoprotein E4 genes do not act in synergy in Finnish late-onset Alzheimer's disease patients , 1998, Neuroscience Letters.
[28] D. G. Clark,et al. Common variants in MS4A4/MS4A6E, CD2uAP, CD33, and EPHA1 are associated with late-onset Alzheimer’s disease , 2011, Nature Genetics.
[29] Scott M. Williams,et al. A balanced accuracy function for epistasis modeling in imbalanced datasets using multifactor dimensionality reduction , 2007, Genetic epidemiology.
[30] Erick R. Scott,et al. Rare coding variants in the phospholipase D3 gene confer risk for Alzheimer’s disease , 2013, Nature.
[31] Jongjoo Kim,et al. Multifactor dimensionality reduction (MDR) analysis to detect single nucleotide polymorphisms associated with a carcass trait in a Hanwoo population , 2008 .
[32] D. M. Penny,et al. The hemochromatosis gene product complexes with the transferrin receptor and lowers its affinity for ligand binding. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[33] A. Townsend,et al. Role of HFE in iron metabolism, hereditary haemochromatosis, anaemia of chronic disease, and secondary iron overload , 2002, The Lancet.
[34] Jason H. Moore,et al. Power of multifactor dimensionality reduction for detecting gene‐gene interactions in the presence of genotyping error, missing data, phenocopy, and genetic heterogeneity , 2003, Genetic epidemiology.
[35] J. Connor,et al. Transferrin and Iron in Normal, Alzheimer's Disease, and Parkinson's Disease Brain Regions , 1995, Journal of neurochemistry.
[36] Mario Cortina-Borja,et al. Discovery by the Epistasis Project of an epistatic interaction between the GSTM3 gene and the HHEX/IDE/KIF11 locus in the risk of Alzheimer's disease , 2013, Neurobiology of Aging.
[37] Michael J. Wade,et al. Epistasis, complex traits, and mapping genes , 2004, Genetica.
[38] Peter Bock,et al. Using a hierarchical approach to avoid over-fitting in early vision , 1994, Proceedings of 12th International Conference on Pattern Recognition.
[39] Kristel Van Steen,et al. Genome-wide association interaction analysis for Alzheimer's disease , 2014, Neurobiology of Aging.
[40] N E Day,et al. Multi-factor dimensionality reduction applied to a large prospective investigation on gene-gene and gene-environment interactions. , 2006, Carcinogenesis.
[41] M. L. Calle,et al. Model‐Based Multifactor Dimensionality Reduction for detecting epistasis in case–control data in the presence of noise , 2011, Annals of human genetics.
[42] O. Combarros,et al. Gene–gene interaction between interleukin-6 and interleukin-10 reduces AD risk , 2004, Neurology.
[43] J. H. Moore,et al. Multifactor-dimensionality reduction reveals high-order interactions among estrogen-metabolism genes in sporadic breast cancer. , 2001, American journal of human genetics.
[44] E. Corder,et al. Transferrin neutralization of amyloid beta 25-35 cytotoxicity. , 2004, Clinica chimica acta; international journal of clinical chemistry.
[45] Ole A. Andreassen,et al. A mutation in APP protects against Alzheimer’s disease and age-related cognitive decline , 2012, Nature.
[46] Jason H. Moore,et al. An application of conditional logistic regression and multifactor dimensionality reduction for detecting gene-gene Interactions on risk of myocardial infarction: The importance of model validation , 2004, BMC Bioinformatics.
[47] M. Hart,et al. Over‐expression of heat shock factor 1 phenocopies the effect of chronic inhibition of TOR by rapamycin and is sufficient to ameliorate Alzheimer's‐like deficits in mice modeling the disease , 2013, Journal of neurochemistry.
[48] Taesung Park,et al. Log-linear model-based multifactor dimensionality reduction method to detect gene-gene interactions , 2007, Bioinform..
[49] A. Ritchie,et al. A new promoter polymorphism in the alpha-1-antichymotrypsin gene is a disease modifier of Alzheimer’s disease , 2005, Neurobiology of Aging.
[50] Yijun Zuo,et al. An entropy-based approach for testing genetic epistasis underlying complex diseases. , 2008, Journal of theoretical biology.
[51] A. Hofman,et al. Variant of TREM2 associated with the risk of Alzheimer's disease. , 2013, The New England journal of medicine.
[52] Todd Holden,et al. A flexible computational framework for detecting, characterizing, and interpreting statistical patterns of epistasis in genetic studies of human disease susceptibility. , 2006, Journal of theoretical biology.
[53] E. Corder,et al. Transferrin neutralization of amyloid β 25-35 cytotoxicity , 2004 .
[54] M. Ritchie,et al. Exploring the Performance of Multifactor Dimensionality Reduction in Large Scale SNP Studies and in the Presence of Genetic Heterogeneity among Epistatic Disease Models , 2008, Human Heredity.
[55] R. Stewart,et al. Assessment of association between mitochondrial aldehyde dehydrogenase polymorphism and Alzheimer’s disease in an older Korean population , 2004, Neurobiology of Aging.
[56] Mee Young Park,et al. Penalized logistic regression for detecting gene interactions. , 2008, Biostatistics.
[57] J. H. Moore,et al. Multifactor-dimensionality reduction shows a two-locus interaction associated with Type 2 diabetes mellitus , 2004, Diabetologia.
[58] Mark T. W. Ebbert,et al. Genetics of Alzheimer's Disease , 2013, BioMed research international.
[59] L. Polito,et al. The SIRT2 polymorphism rs10410544 and risk of Alzheimer’s disease in two Caucasian case–control cohorts , 2013, Alzheimer's & Dementia.
[60] Scott M. Williams,et al. Traversing the conceptual divide between biological and statistical epistasis: systems biology and a more modern synthesis. , 2005, BioEssays : news and reviews in molecular, cellular and developmental biology.
[61] Jason H. Moore,et al. Multifactor dimensionality reduction software for detecting gene-gene and gene-environment interactions , 2003, Bioinform..
[62] Mario Cortina-Borja,et al. Epistasis in sporadic Alzheimer's disease , 2009, Neurobiology of Aging.
[63] Margaret R Karagas,et al. Concordance of multiple analytical approaches demonstrates a complex relationship between DNA repair gene SNPs, smoking and bladder cancer susceptibility. , 2006, Carcinogenesis.
[64] J. Haines,et al. Drug transporter and metabolizing enzyme gene variants and nonnucleoside reverse-transcriptase inhibitor hepatotoxicity. , 2006, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.
[65] Sara Marsal,et al. Identification of a two-loci epistatic interaction associated with susceptibility to rheumatoid arthritis through reverse engineering and multifactor dimensionality reduction. , 2007, Genomics.
[66] Perry G. Ridge,et al. Population-based Analysis of Alzheimer’s Disease Risk Alleles Implicates Genetic Interactions , 2014, Biological Psychiatry.
[67] M. Imagawa,et al. Deficiency in mitochondrial aldehyde dehydrogenase increases the risk for late-onset Alzheimer's disease in the Japanese population. , 2000, Biochemical and biophysical research communications.
[68] Jason H Moore,et al. Computational analysis of gene-gene interactions using multifactor dimensionality reduction , 2004, Expert review of molecular diagnostics.
[69] A. Smith,et al. Using meta-analysis to explain the diversity of results in genetic studies of late-onset Alzheimer’s disease and to identify high-risk subgroups , 2001, Neuroscience.
[70] O. Combarros,et al. Interaction of the H63D Mutation in the Hemochromatosis Gene with the Apolipoprotein E Epsilon 4 Allele Modulates Age at Onset of Alzheimer’s Disease , 2003, Dementia and Geriatric Cognitive Disorders.
[71] Nick C Fox,et al. Meta-analysis of 74,046 individuals identifies 11 new susceptibility loci for Alzheimer's disease , 2013, Nature Genetics.
[72] E. Shin,et al. Multilocus analysis of atopy in Korean children using multifactor-dimensionality reduction , 2006, Thorax.
[73] Laurent Briollais,et al. Methodological issues in detecting gene-gene interactions in breast cancer susceptibility: a population-based study in Ontario , 2007, BMC medicine.