The persistence of the critically endangered Asiatic cheetah relies upon urgent connectivity protection: a landscape genetics perspective

[1]  J. C. Brito,et al.  Assessing Asiatic cheetah’s individual diet using metabarcoding and its implication for conservation , 2022, Scientific Reports.

[2]  L. Hunter,et al.  Genomic analyses show extremely perilous conservation status of African and Asiatic cheetahs (Acinonyx jubatus) , 2022, Molecular ecology.

[3]  Vivienne L. Williams,et al.  Genetic guidelines for translocations: Maintaining intraspecific diversity in the lion (Panthera leo) , 2021, Evolutionary applications.

[4]  J. C. Brito,et al.  Risks to conservation of species in the wild from promoting ex situ management: response to Farhadinia et al. 2020 , 2021, Conservation biology : the journal of the Society for Conservation Biology.

[5]  K. Safi,et al.  The impacts of extreme climate change on mammals differ among functional groups at regional scale: The case of Iranian terrestrial mammals , 2021, Diversity and Distributions.

[6]  E. C. Ellis,et al.  People have shaped most of terrestrial nature for at least 12,000 years , 2021, Proceedings of the National Academy of Sciences.

[7]  A. Templeton,et al.  Subspecies hybridization as a potential conservation tool in species reintroductions , 2021, Evolutionary applications.

[8]  L. Chikhi,et al.  Genetic consequences of social structure in the golden-crowned sifaka , 2020, Heredity.

[9]  Javad Ramezani,et al.  Asiatic Cheetah's (Acinonyx jubatus venaticus Griffith, 1821) (Felidae: Carnivora) habitat suitability modeling in Iran , 2020 .

[10]  S. Fakheran,et al.  Assessing future distribution, suitability of corridors and efficiency of protected areas to conserve vulnerable ungulates under climate change , 2020, Diversity and Distributions.

[11]  H. Rusterholz,et al.  Genetic effects of anthropogenic habitat fragmentation on remnant animal and plant populations: a meta-analysis , 2018, Ecosphere.

[12]  J. C. Brito,et al.  Availability of prey and natural habitats are related with temporal dynamics in range and habitat suitability for Asiatic Cheetah , 2018 .

[13]  A. Clevenger,et al.  Road expansion: A challenge to conservation of mammals, with particular emphasis on the endangered Asiatic cheetah in Iran , 2018, Journal for Nature Conservation.

[14]  Mohsen Ahmadi,et al.  Combining landscape suitability and habitat connectivity to conserve the last surviving population of cheetah in Asia , 2017 .

[15]  R. Godinho,et al.  Spatial assessment of wolf-dog hybridization in a single breeding period , 2017, Scientific Reports.

[16]  Samuel A. Cushman,et al.  All roads lead to Iran: Predicting landscape connectivity of the last stronghold for the critically endangered Asiatic cheetah , 2017 .

[17]  M. Farhadinia,et al.  Wandering the barren deserts of Iran: Illuminating high mobility of the Asiatic cheetah with sparse data , 2016 .

[18]  M. Diekhans,et al.  Genomic legacy of the African cheetah, Acinonyx jubatus , 2015, Genome Biology.

[19]  N. Keyghobadi,et al.  Landscape genetics in a changing world: disentangling historical and contemporary influences and inferring change , 2015, Molecular ecology.

[20]  J. DeWoody,et al.  The reduction of genetic diversity in threatened vertebrates and new recommendations regarding IUCN conservation rankings , 2015 .

[21]  N. Ferrand,et al.  Real‐time assessment of hybridization between wolves and dogs: combining noninvasive samples with ancestry informative markers , 2015, Molecular ecology resources.

[22]  M. Hebblewhite,et al.  Status and Ecological Effects of the World’s Largest Carnivores , 2014, Science.

[23]  G. M. Macbeth,et al.  NeEstimator v2: re‐implementation of software for the estimation of contemporary effective population size (Ne) from genetic data , 2014, Molecular ecology resources.

[24]  J. Godoy,et al.  Genetics at the verge of extinction: insights from the Iberian lynx , 2013, Molecular ecology.

[25]  J. Mcnutt,et al.  Comparison of the effects of artificial and natural barriers on large African carnivores: implications for interspecific relationships and connectivity. , 2013, The Journal of animal ecology.

[26]  P. Charruau,et al.  Social and genetic population structure of free-ranging cheetah in Botswana: implications for conservation , 2013, European Journal of Wildlife Research.

[27]  Rod Peakall,et al.  GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research—an update , 2012, Bioinform..

[28]  L. Seeb,et al.  Multiplex preamplification PCR and microsatellite validation enables accurate single nucleotide polymorphism genotyping of historical fish scales , 2011, Molecular ecology resources.

[29]  C. Schlötterer,et al.  Phylogeography, genetic structure and population divergence time of cheetahs in Africa and Asia: evidence for long-term geographic isolates , 2011, Molecular ecology.

[30]  Jinliang Wang coancestry: a program for simulating, estimating and analysing relatedness and inbreeding coefficients , 2011, Molecular ecology resources.

[31]  J. Ragle,et al.  IUCN Red List of Threatened Species , 2010 .

[32]  F. Balloux,et al.  Discriminant analysis of principal components: a new method for the analysis of genetically structured populations , 2010, BMC Genetics.

[33]  R. Waples,et al.  Linkage disequilibrium estimates of contemporary Ne using highly variable genetic markers: a largely untapped resource for applied conservation and evolution , 2009, Evolutionary applications.

[34]  Jinliang Wang A new method for estimating effective population sizes from a single sample of multilocus genotypes , 2009, Molecular ecology.

[35]  B. Deagle,et al.  Analysis of Australian fur seal diet by pyrosequencing prey DNA in faeces , 2009, Molecular ecology.

[36]  N. Pettorelli,et al.  Exploring habitat use by cheetahs using ecological niche factor analysis , 2009 .

[37]  N. Schtickzelle,et al.  Positive correlation between genetic diversity and fitness in a large, well-connected metapopulation , 2008, BMC Biology.

[38]  D. Cilliers,et al.  The power of resolution of microsatellite markers and assignment tests to determine the geographic origin of cheetah (Acinonyx jubatus) in Southern Africa , 2008 .

[39]  Thibaut Jombart,et al.  adegenet: a R package for the multivariate analysis of genetic markers , 2008, Bioinform..

[40]  S. O’Brien,et al.  Molecular Genetic Insights on Cheetah (Acinonyx jubatus) Ecology and Conservation in Namibia , 2007, The Journal of heredity.

[41]  S. Durant,et al.  Genetic analysis reveals promiscuity among female cheetahs , 2007, Proceedings of the Royal Society B: Biological Sciences.

[42]  R. Frankham Genetics and extinction , 2005 .

[43]  G. Evanno,et al.  Detecting the number of clusters of individuals using the software structure: a simulation study , 2005, Molecular ecology.

[44]  Kevin S. McKelvey,et al.  Felid sex identification based on noninvasive genetic samples , 2005 .

[45]  P. Taberlet,et al.  Low genotyping error rates in wild ungulate faeces sampled in winter , 2004 .

[46]  James L. D. Smith,et al.  Phylogeography and Genetic Ancestry of Tigers (Panthera tigris) , 2004, PLoS biology.

[47]  T. J. Roper,et al.  Reliable microsatellite genotyping of the Eurasian badger (Meles meles) using faecal DNA , 2003, Molecular ecology.

[48]  Bruce Rannala,et al.  Bayesian inference of recent migration rates using multilocus genotypes. , 2003, Genetics.

[49]  T. Brooks,et al.  Habitat Loss and Extinction in the Hotspots of Biodiversity , 2002 .

[50]  D. Goldstein,et al.  Genomic microsatellites as evolutionary chronometers: a test in wild cats. , 2002, Genome research.

[51]  P. Donnelly,et al.  Inference of population structure using multilocus genotype data. , 2000, Genetics.

[52]  A A Schäffer,et al.  A genetic linkage map of microsatellites in the domestic cat (Felis catus). , 1999, Genomics.

[53]  P Taberlet,et al.  Reliable genotyping of samples with very low DNA quantities using PCR. , 1996, Nucleic acids research.

[54]  S. O’Brien,et al.  Dating the genetic bottleneck of the African cheetah. , 1993, Proceedings of the National Academy of Sciences of the United States of America.

[55]  M. Salimans,et al.  Rapid and simple method for purification of nucleic acids , 1990, Journal of clinical microbiology.

[56]  R. Sokal,et al.  Multiple regression and correlation extensions of the mantel test of matrix correspondence , 1986 .

[57]  B. Weir,et al.  ESTIMATING F‐STATISTICS FOR THE ANALYSIS OF POPULATION STRUCTURE , 1984, Evolution; international journal of organic evolution.

[58]  M. Kaboli,et al.  Evaluating Wildlife–Vehicle Collision Hotspots Using Kernel-Based Estimation: a Focus on the Endangered Asiatic Cheetah in Central Iran , 2016 .

[59]  R Core Team,et al.  R: A language and environment for statistical computing. , 2014 .

[60]  Theunis Piersma,et al.  The interplay between habitat availability and population differentiation , 2012 .

[61]  H. Asadi The environmental limitations and future of the Asiatic cheetah in Iran , 2002 .

[62]  J. Goudet FSTAT, a program to estimate and test gene diversities and fixation indices (version 2.9.3). Updated from Goudet (1995) , 2001 .