The Brucella suis genome reveals fundamental similarities between animal and plant pathogens and symbionts

The 3.31-Mb genome sequence of the intracellular pathogen and potential bioterrorism agent, Brucella suis, was determined. Comparison of B. suis with Brucella melitensis has defined a finite set of differences that could be responsible for the differences in virulence and host preference between these organisms, and indicates that phage have played a significant role in their divergence. Analysis of the B. suis genome reveals transport and metabolic capabilities akin to soil/plant-associated bacteria. Extensive gene synteny between B. suis chromosome 1 and the genome of the plant symbiont Mesorhizobium loti emphasizes the similarity between this animal pathogen and plant pathogens and symbionts. A limited repertoire of genes homologous to known bacterial virulence factors were identified.

[1]  R. Kingsley,et al.  Salmonella enterica serotype Typhimurium ShdA is an outer membrane fibronectin‐binding protein that is expressed in the intestine , 2002, Molecular microbiology.

[2]  Natalia N. Ivanova,et al.  The genome sequence of the facultative intracellular pathogen Brucella melitensis , 2001, Proceedings of the National Academy of Sciences of the United States of America.

[3]  J A Eisen,et al.  The Genome of the Natural Genetic Engineer Agrobacterium tumefaciens C58 , 2001, Science.

[4]  Ronald W. Davis,et al.  The Composite Genome of the Legume Symbiont Sinorhizobium meliloti , 2001, Science.

[5]  S. Salzberg,et al.  Complete Genome Sequence of a Virulent Isolate of Streptococcus pneumoniae , 2001, Science.

[6]  M. Minnick,et al.  Establishing a Direct Role for the Bartonella bacilliformis Invasion-Associated Locus B (IalB) Protein in Human Erythrocyte Parasitism , 2001, Infection and Immunity.

[7]  Ian T. Paulsen,et al.  Complete genome sequence of Caulobacter crescentus , 2001, Proceedings of the National Academy of Sciences of the United States of America.

[8]  N. W. Davis,et al.  Genome sequence of enterohaemorrhagic Escherichia coli O157:H7 , 2001, Nature.

[9]  M. Mandrand-Berthelot,et al.  Identification of the nik Gene Cluster of Brucella suis: Regulation and Contribution to Urease Activity , 2001, Journal of bacteriology.

[10]  J. Liautard,et al.  Brucella suis-Impaired Specific Recognition of Phagosomes by Lysosomes due to Phagosomal Membrane Modifications , 2001, Infection and Immunity.

[11]  E. Martínez-Romero,et al.  Limited Genetic Diversity ofBrucella spp , 2001, Journal of Clinical Microbiology.

[12]  Fan Yang,et al.  TIGRFAMs: a protein family resource for the functional identification of proteins , 2001, Nucleic Acids Res..

[13]  S. Salzberg,et al.  Evidence for symmetric chromosomal inversions around the replication origin in bacteria , 2000, Genome Biology.

[14]  J. A. Carroll,et al.  Hemin-Binding Surface Protein fromBartonella quintana , 2000, Infection and Immunity.

[15]  I. Paulsen,et al.  Microbial genome analyses: comparative transport capabilities in eighteen prokaryotes. , 2000, Journal of molecular biology.

[16]  S. Salzberg,et al.  DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae , 2000, Nature.

[17]  G. Arenas,et al.  Intracellular Trafficking of Brucella abortus in J774 Macrophages , 2000, Infection and Immunity.

[18]  D. O’Callaghan,et al.  Identification of Brucella suis Genes Affecting Intracellular Survival in an In Vitro Human Macrophage Infection Model by Signature-Tagged Transposon Mutagenesis , 2000, Infection and Immunity.

[19]  Y. Nakamura,et al.  Complete genome structure of the nitrogen-fixing symbiotic bacterium Mesorhizobium loti. , 2000, DNA research : an international journal for rapid publication of reports on genes and genomes.

[20]  W R Pearson,et al.  Flexible sequence similarity searching with the FASTA3 program package. , 2000, Methods in molecular biology.

[21]  R. Breeze,et al.  Agriculture and Food Security , 1999, Annals of the New York Academy of Sciences.

[22]  D R Franz Foreign Animal Disease Agents as Weapons in Biological Warfare , 1999, Annals of the New York Academy of Sciences.

[23]  S. Salzberg,et al.  Improved microbial gene identification with GLIMMER. , 1999, Nucleic acids research.

[24]  M. Kortepeter,et al.  Potential biological weapons threats. , 1999, Emerging infectious diseases.

[25]  Edward Regis,et al.  The Biology of Doom: The History of America's Secret Germ Warfare Project , 1999 .

[26]  R. Parton,et al.  Brucella abortus Transits through the Autophagic Pathway and Replicates in the Endoplasmic Reticulum of Nonprofessional Phagocytes , 1998, Infection and Immunity.

[27]  J. Letesson,et al.  Identification of the Perosamine Synthetase Gene ofBrucella melitensis 16M and Involvement of Lipopolysaccharide O Side Chain in BrucellaSurvival in Mice and in Macrophages , 1998, Infection and Immunity.

[28]  D. O’Callaghan,et al.  Differences in chromosome number and genome rearrangements in the genus Brucella , 1998, Molecular microbiology.

[29]  S. Salzberg,et al.  Microbial gene identification using interpolated Markov models. , 1998, Nucleic acids research.

[30]  S. Brunak,et al.  SHORT COMMUNICATION Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites , 1997 .

[31]  J. Lobry Asymmetric substitution patterns in the two DNA strands of bacteria. , 1996, Molecular biology and evolution.

[32]  M. Horwitz,et al.  Purification, characterization, and genetic analysis of Mycobacterium tuberculosis urease, a potentially critical determinant of host-pathogen interaction , 1995, Journal of bacteriology.

[33]  E. J. Young,et al.  An overview of human brucellosis. , 1995, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

[34]  R. Fleischmann,et al.  Whole-genome random sequencing and assembly of Haemophilus influenzae Rd. , 1995, Science.

[35]  M. Minnick,et al.  Characterization of a two-gene locus from Bartonella bacilliformis associated with the ability to invade human erythrocytes , 1995, Infection and immunity.

[36]  T. D. de Koning-Ward,et al.  The urease complex gene of Yersinia enterocolitica and its role in virulence. , 1995, Contributions to microbiology and immunology.

[37]  Manuel G. Claros,et al.  TopPred II: an improved software for membrane protein structure predictions , 1994, Comput. Appl. Biosci..

[38]  Baldwin Cl,et al.  Macrophages and Brucella. , 1994 .

[39]  T. Ficht,et al.  Pathogenesis of Brucella. , 2008, Critical reviews in microbiology.

[40]  E. Stackebrandt,et al.  Brucella abortus 16S rRNA and lipid A reveal a phylogenetic relationship with members of the alpha-2 subdivision of the class Proteobacteria , 1990, Journal of bacteriology.

[41]  P. Nicoletti Vaccination against Brucella. , 1990, Advances in biotechnological processes.

[42]  M. Schmidt,et al.  Cloning and expression of an adhesin (AIDA-I) involved in diffuse adherence of enteropathogenic Escherichia coli , 1989, Infection and immunity.

[43]  J. Timoney,et al.  Hagan and Bruner's Microbiology and Infectious Diseases of Domestic Animals , 1988 .

[44]  N. Cheville,et al.  Pathogenesis of Placentitis in the Goat Inoculated with Brucella abortus. II. Ultrastructural Studies , 1986, Veterinary pathology.

[45]  B. Gay,et al.  Identification of fibronectins in peritoneal macrophages during the phagocytosis of Brucella. An immunocytochemical study by electron microscopy. , 1986, Virchows Archiv. B, Cell pathology including molecular pathology.

[46]  F. Grimont,et al.  Brucella, a monospecific genus as shown by deoxyribonucleic acid hybridization , 1985 .

[47]  M. Corbel,et al.  Recommendations for the description of species and biotypes of the genus Brucella. , 1976, Developments in biological standardization.