The future of habitat modeling and instream flow assessment techniques

This paper examines emerging trends in applied instream flow assessment methods within the context of an ecologically based assessment framework, in light of the challenges imposed by the spatial and temporal domains of aquatic ecosystems. I will attempt to highlight what I consider to be the more promising technologies, modeling techniques and analysis approaches that represent workable tools to meet the needs of practical, applied instream flow assessments. To this end, I will touch on measurement techniques and technologies used to characterize the spatial domain of river systems, analysis tools for characterization of the hydrodynamic elements of rivers in both the spatial and temporal domains, and finally tools and approaches which integrate the biological elements at the individual, population and community levels. Much of my view of the future of habitat modeling remains an abstraction, in that integration of all the pieces has yet to be accomplished, field validation remains unproven, availability of an integrated analysis framework (i.e. computer software system) is not yet available, and a clear framework for selection and application of specific tools has not been developed. However, in presenting this particular view of the future, I hope to stimulate a broader collaborative effort between biologists, engineers and resource managers that continues to move the state-of-the-art forward. This effort should not consider the plurality of methods or analytical procedures as competing approaches, but rather as representing a tool-rich environment upon which researchers and practitioners can draw to provide scientifically based quantifications in support of management decisions which must protect and enhance our aquatic ecosystems. © 1998 John Wiley & Sons, Ltd.

[1]  J. Reynolds,et al.  A Simulation Experiment to Quantify Spatial Heterogeneity in Categorical Maps , 1994 .

[2]  Jennifer L. Hill,et al.  An Energetic Model of Microhabitat Use for Rainbow Trout and Rosyside Dace , 1993 .

[3]  B. H. Heede,et al.  Hydrodynamic and Fluvial Morphologic Processes: Implications for Fisheries Management and Research , 1990 .

[4]  H. Beecher,et al.  Predicting Microdistributions of Steelhead (Oncorhynchus mykiss) Parr from Depth and Velocity Preference Criteria: Test of an Assumption of the Instream Flow Incremental Methodology , 1993 .

[5]  Charles P. Hawkins,et al.  Variation in condition of rainbow trout in relation to food, temperature, and individual length in the Green River Utah , 1995 .

[6]  I. Jowett,et al.  A method for objectively identifying pool, run, and riffle habitats from physical measurements , 1993 .

[7]  S. Barnard,et al.  Le développement des modèles d'habitat pour les salmonidés d'eau courante et leur application à la gestion piscicole , 1995 .

[8]  Webster Van Winkle,et al.  Individual-Based Approach to Fish Population Dynamics: An Overview , 1993 .

[9]  A. Bardonnet,et al.  Diel rhythm of emergence and of first displacement downstream in trout (Salmo trutta), Atlantic salmon (S. salar) and grayling (Thymallus thymallus) , 1993 .

[10]  Jay R. Malcolm,et al.  Edge effects in central Amazonian forest fragments , 1994 .

[11]  Donald J. Orth,et al.  ECOLOGICAL CONSIDERATIONS IN THE DEVELOPMENT AND APPLICATION OF INSTREAM FLOW-HABITAT MODELS , 1987 .

[12]  D. T. Crisp,et al.  Stream channel experiments on downstream movement of recently emerged trout, Salmo trutta L., and salmon, S. salar L.—11. Effects of constant and changing velocities and of day and night upon dispersal rate , 1991 .

[13]  C. S. Shirvell,et al.  A Critique of the Instream Flow Incremental Methodology and Observations on Flow Determination in New Zealand , 1987 .

[14]  Nicolas Lamouroux,et al.  An unconventional approach to modeling spatial and temporal variability of local shear stress in stream segments , 1992 .

[15]  Christopher W. Hickey,et al.  Microhabitat preferences of benthic invertebrates and the development of generalised Deleatidium spp. habitat suitability curves, applied to four New Zealand rivers , 1991 .

[16]  John M. Bartholow,et al.  A salmonid population model with emphasis on habitat limitations , 1993 .

[17]  Peter R. Wilcock,et al.  Methods for Estimating the Critical Shear Stress of Individual Fractions in Mixed-Size Sediment , 1988 .

[18]  R M May,et al.  Niche overlap as a function of environmental variability. , 1972, Proceedings of the National Academy of Sciences of the United States of America.

[19]  P. Burrough Principles of Geographical Information Systems for Land Resources Assessment , 1986 .

[20]  S. Barnard,et al.  Variabilité des populations de salmonidés en eau courante : Etude de la variance liée à différentes échelles spatiales ou temporelles et implications pour les modèles d'habitat , 1995 .

[21]  James A. Gore,et al.  Near‐substrate hydraulic conditions under artificial floods from peaking hydropower operation: A preliminary analysis of disturbance intensity and duration , 1994 .

[22]  Jill Lancaster,et al.  Flow Refugia and the Microdistribution of Lotic Macroinvertebrates , 1993, Journal of the North American Benthological Society.

[23]  B. Statzner,et al.  Stonefly predation along a hydraulic gradient: a field test of the harsh - benign hypothesis. , 1990 .

[24]  Leon A. Barmuta,et al.  An ecologically useful classification of mean and near‐bed flows in streams and rivers , 1989 .

[25]  T. Changeux Structure du peuplement piscicole à l'échelle d'un grand bassin européen : organisation longitudinale, influence de la pente et tendances régionales , 1995 .

[26]  F. Rahel,et al.  Generality of Microhabitat Suitability Models for Young Colorado River Cutthroat Trout (Oncorhynchus clarki pleuriticus) across Sites and among Years in Wyoming Streams , 1992 .

[27]  Michael J. Wiley,et al.  Application of Diel Feeding Chronology to Habitat Suitability Analysis of Warmwater Stream Fishes , 1992 .

[28]  G. Powell,et al.  Edge and other effects of isolation on Amazon forest fragments , 1986 .

[29]  Donald J. Orth,et al.  Ontogenetic diet shifts of age‐0 smallmouth bass (Micropterus dolomieu Lacepède) in the New River, West Virginia, USA , 1992 .

[30]  R. J. White,et al.  Competition Between Brook Trout (Salvelinus fontinalis) and Brown Trout (Salmo trutta) for Positions in a Michigan Stream , 1981 .

[31]  Robert B. Jacobson,et al.  The importance of fluvial hydraulics to fish-habitat restoration in low-gradient alluvial streams , 1993 .

[32]  Dilip Mathur,et al.  A critique of the instream flow incremental methodology , 1985 .

[33]  D. J. Orth,et al.  Influence du compartiment trophique dans les réponses des populations de poissons aux variations artificielles de débit , 1995 .

[34]  David G. Hankin,et al.  Multistage Sampling Designs in Fisheries Research: Applications in Small Streams , 1984 .

[35]  I. Jowett,et al.  Models of the Abundance of Large Brown Trout in New Zealand Rivers , 1992 .

[36]  Donald J. Orth,et al.  Trophic Basis of Production of Stream-Dwelling Smallmouth Bass, Rock Bass, and Flathead Catfish in Relation to Invertebrate Bait Harvest , 1993 .

[37]  Wayne A. Hubert,et al.  Habitat Use by Adult Paddlefish in the Upper Mississippi River , 1984 .

[38]  Thomas A. Wesche,et al.  Status of Instream Flow Legislation and Practices in North America , 1989 .

[39]  David G. Hankin,et al.  Estimating Total Fish Abundance and Total Habitat Area in Small Streams Based on Visual Estimation Methods , 1988 .

[40]  E. Pianka,et al.  Niche overlap and diffuse competition. , 1974, Proceedings of the National Academy of Sciences of the United States of America.

[41]  Donald J. Orth,et al.  Evaluation of the Incremental Methodology for Recommending Instream Flows for Fishes , 1982 .

[42]  Duncan T. Patten,et al.  Flood flows and dynamics of Sonoran riparian forests: Rivers , 1991 .

[43]  Thomas G. Coon,et al.  Relations Between Habitat Variability and Population Dynamics of Bass in the Huron River, Michigan. , 1994 .

[44]  John M. Bartholow,et al.  Conceptual model for quantifying pre‐smolt production from flow‐dependent physical habitat and water temperature , 1993 .

[45]  Michael K. Young,et al.  A hierarchical approach to classifying stream habitat features , 1993 .

[46]  M. B. Bain L'habitat à l'échelle locale : distribution multiparamètre des poissons d'eau courante , 1995 .

[47]  Stephen B. Weisberg,et al.  Enhancement of benthic macroinvertebrates by minimum flow from a hydroelectric dam , 1990 .

[48]  W. H. Burton,et al.  Enhancement of Fish Feeding and Growth after an Increase in Minimum Flow below the Conowingo Dam , 1993 .

[49]  Mark S. Bevelhimer,et al.  Relative Importance of Temperature, Food, and Physical Structure to Habitat Choice by Smallmouth Bass in Laboratory Experiments , 1996 .

[50]  J. Rinne,et al.  Habitat Use by Spikedace, Meda fulgida (Pisces: Cyprinidae) in Southwestern Streams with Reference to Probable Habitat Competition by Red Shiner, Notropis lutrensis (Pisces: Cyprinidae) , 1991 .

[51]  George H. Belt,et al.  Relationships between particle movement and channel morphology in some Northern Idaho streams , 1996 .

[52]  Robert K. Colwell,et al.  On the Measurement of Niche Breadth and Overlap. , 1971, Ecology.

[53]  K. Rose,et al.  Individual‐Based Model of Young‐of‐the‐Year Striped Bass Population Dynamics. I. Model Description and Baseline Simulations , 1993 .

[54]  M. Leclerc,et al.  Two‐Dimensional Hydrodynamic Modeling: A Neglected Tool in the Instream Flow Incremental Methodology , 1995 .

[55]  J. Stromberg,et al.  Instream flow models for mixed deciduous riparian vegetation within a semiarid region , 1993 .

[56]  Monica G. Turner,et al.  Methods to evaluate the performance of spatial simulation models , 1989 .

[57]  Luther P. Aadland,et al.  Stream Habitat Types: Their Fish Assemblages and Relationship to Flow , 1993 .

[58]  Christer Nilsson,et al.  Long-term effects of river regulation on river margin vegetation , 1991 .

[59]  Patrick D. Armitage,et al.  Determination of ecologically acceptable flows in rivers with seasonal changes in the density of macrophyte , 1994 .

[60]  Donald J. Orth,et al.  Habitat Use by an Assemblage of Fish in a Large Warmwater Stream , 1991 .

[61]  W. Romme,et al.  FIRE AND LANDSCAPE DIVERSITY IN SUBALPINE FORESTS OF YELLOWSTONE NATIONAL PARK , 1982 .

[62]  Hervé Capra,et al.  A new tool to interpret magnitude and duration of fish habitat variations , 1995 .

[63]  N. Poff,et al.  Physical habitat template of lotic systems: Recovery in the context of historical pattern of spatiotemporal heterogeneity , 1990 .

[64]  Reed F. Noss,et al.  A Regional Landscape Approach to Maintain Diversity , 1983 .

[65]  P. Gaudin,et al.  Mise en place des premiers comportements et utilisation de l'habitat après l'émergence chez les salmonidés d'eau courante , 1995 .

[66]  Richard H. Yahner,et al.  Changes in Wildlife Communities Near Edges , 1988 .

[67]  I. Waite,et al.  Habitat Criteria for Rearing Steelhead: A Comparison of Site-Specific and Standard Curves for Use in the Instream Flow Incremental Methodology , 1992 .

[68]  C.R.N. Elliott,et al.  Modelling the effect of groundwater abstraction on salmonid habitat availability in the river Allen, Dorset, England , 1995 .

[69]  John D. Madsen,et al.  Aquatic Plant Control Research Program: Proceedings Annual Meeting (28th) Held in Baltimore, Maryland on November 15-18, 1993 , 1994 .

[70]  B. Statzner,et al.  Growth and Reynolds number of lotic macroinvertebrates: a problem for adaptation of shape to drag , 1988 .

[71]  D. Gilvear,et al.  Image analysis of aerial photography to quantify changes in channel morphology and instream habitat following placer mining in interior Alaska , 1995 .

[72]  B. Statzner,et al.  Standard hemispheres as indicators of flow characteristics in lotic benthos research , 1989 .

[73]  B. Statzner,et al.  Stream hydraulics as a major determinant of benthic invertebrate zonation patterns , 1986 .

[74]  Ken D. Bovee,et al.  Application and testing of a procedure to evaluate transferability of habitat suitability criteria , 1993 .

[75]  Wayne A. Hubert,et al.  Relations of Physical Habitat to Abundance of Four Nongame Fishes in High-Plains Streams: A Test of Habitat Suitability Index Models , 1989 .

[76]  J. Smith,et al.  Calculations of the critical shear stress for motion of uniform and heterogeneous sediments , 1987 .

[77]  B. Statzner,et al.  Calibration of FST‐hemispheres against bottom shear stress in a laboratory flume* , 1991 .

[78]  L. Harris Edge Effects and Conservation of Biotic Diversity , 1988 .

[79]  Peter M. Steffler,et al.  Comparison of one and two-dimensional hydrodynamic models for a small habitat stream , 1996 .