Protein localization to the nucleolus: a search for targeting domains in nucleolin.

Nucleolin, a major nucleolar phosphoprotein, is presumed to function in rDNA transcription, rRNA packaging and ribosome assembly. Its primary sequence was highly conserved during evolution and suggests a multi-domain structure. To identify structural elements required for nuclear uptake and nucleolar accumulation of nucleolin, we used site-directed mutagenesis to introduce point- and deletion-mutations into a chicken nucleolin cDNA. Following transient expression in mammalian cells, the intracellular distribution of the corresponding wild-type and mutant proteins was determined by indirect immunofluorescence microscopy. We found that nucleolin contains a functional nuclear localization signal (KRKKEMANKSAPEAKKKK) that conforms exactly to the consensus proposed recently for a bipartite signal (Robbins, J., Dilworth, S.M., Laskey, R.A. and Dingwall, C. (1991) Cell 64, 615-623). Concerning nucleolar localization, we found that the N-terminal 250 amino acids of nucleolin are dispensible, but deletion of either the centrally located RNA-binding motifs (the RNP domain) or the glycine/arginine-rich C terminus (the GR domain) resulted in an exclusively nucleoplasmic distribution. Although both of these latter domains were required for correct subcellular localization of nucleolin, they were not sufficient to target non-nucleolar proteins to the nucleolus. From these results we conclude that nucleolin does not contain a single, linear nucleolar targeting signal. Instead, we propose that the protein uses a bipartite NLS to enter the nucleus and then accumulates within the nucleolus by virtue of binding to other nucleolar components (probably rRNA) via its RNP and GR domains.

[1]  H. Bourbon,et al.  Detection and localization of a class of proteins immunologically related to a 100-kDa nucleolar protein. , 2005, European journal of biochemistry.

[2]  C. Dreyer,et al.  Requirements for nuclear translocation and nucleolar accumulation of nucleolin of Xenopus laevis. , 1993, European journal of cell biology.

[3]  J. Navarro Three-dimensional imaging of diatom ultrastructure with high resolution low-voltage SEM , 1993 .

[4]  C. Dingwall,et al.  The nuclear membrane. , 1992, Science.

[5]  F. Amalric,et al.  Concerted activities of the RNA recognition and the glycine-rich C-terminal domains of nucleolin are required for efficient complex formation with pre-ribosomal RNA. , 1992, European journal of biochemistry.

[6]  T. Kondo,et al.  Mouse rRNA gene transcription factor mUBF requires both HMG‐box1 and an acidic tail for nucleolar accumulation: molecular analysis of the nucleolar targeting mechanism. , 1992, The EMBO journal.

[7]  R. Lanford,et al.  Nuclear transport: a guide to import receptors. , 1992, Trends in cell biology.

[8]  F. Amalric,et al.  The glycine-rich domain of nucleolin has an unusual supersecondary structure responsible for its RNA-helix-destabilizing properties. , 1992, The Journal of biological chemistry.

[9]  D. Tollervey,et al.  GAR1 is an essential small nucleolar RNP protein required for pre‐rRNA processing in yeast. , 1992, The EMBO journal.

[10]  J. Gall,et al.  Localization of the nucleolar protein NO38 in amphibian oocytes , 1992, The Journal of cell biology.

[11]  E. Nigg,et al.  Casein kinase II is a predominantly nuclear enzyme , 1992, The Journal of cell biology.

[12]  U. Aebi,et al.  Toward a more complete 3-D structure of the nuclear pore complex. , 1991, Journal of structural biology.

[13]  E. Nigg,et al.  Mutations of p34cdc2 phosphorylation sites induce premature mitotic events in HeLa cells: evidence for a double block to p34cdc2 kinase activation in vertebrates. , 1991, The EMBO journal.

[14]  P. Bingham,et al.  Arginine/serine-rich domains of the su(wa) and tra RNA processing regulators target proteins to a subnuclear compartment implicated in splicing , 1991, Cell.

[15]  E. Nigg,et al.  The CaaX motif is required for isoprenylation, carboxyl methylation, and nuclear membrane association of lamin B2 , 1991, The Journal of cell biology.

[16]  Z. Xue,et al.  The NSR1 gene encodes a protein that specifically binds nuclear localization sequences and has two RNA recognition motifs , 1991, The Journal of cell biology.

[17]  J. Heitman,et al.  Nuclear protein localization. , 1991, Biochimica et biophysica acta.

[18]  R. Laskey,et al.  Two interdependent basic domains in nucleoplasmin nuclear targeting sequence: Identification of a class of bipartite nuclear targeting sequence , 1991, Cell.

[19]  P. Silver How proteins enter the nucleus , 1991, Cell.

[20]  T. Nguyen,et al.  Sequence-specific interaction of Tat protein and Tat peptides with the transactivation-responsive sequence element of human immunodeficiency virus type 1 in vitro. , 1990, Proceedings of the National Academy of Sciences of the United States of America.

[21]  D M Crothers,et al.  Fragments of the HIV-1 Tat protein specifically bind TAR RNA. , 1990, Science.

[22]  F. Amalric,et al.  Repeat peptide motifs which contain beta-turns and modulate DNA condensation in chromatin. , 1990, European journal of biochemistry.

[23]  J. Labbé,et al.  Mitosis-specific phosphorylation of nucleolin by p34cdc2 protein kinase , 1990, Molecular and cellular biology.

[24]  E. Nigg,et al.  cDNA sequences of chicken nucleolin/C23 and NO38/B23, two major nucleolar proteins. , 1990, Nucleic acids research.

[25]  J. Labbé,et al.  Identification of major nucleolar proteins as candidate mitotic substrates of cdc2 kinase , 1990, Cell.

[26]  C. Rosen,et al.  Identification of sequences important in the nucleolar localization of human immunodeficiency virus Rev: relevance of nucleolar localization to function , 1990, Journal of virology.

[27]  R. Benavente,et al.  Functional and dynamic aspects of the mammalian nucleolus , 1990, BioEssays : news and reviews in molecular, cellular and developmental biology.

[28]  P. Mariottini,et al.  Molecular cloning of Xenopus fibrillarin, a conserved U3 small nuclear ribonucleoprotein recognized by antisera from humans with autoimmune disease , 1990, Molecular and cellular biology.

[29]  J. Hartwig,et al.  The CaaX motif of lamin A functions in conjunction with the nuclear localization signal to target assembly to the nuclear envelope , 1989, Cell.

[30]  C. Burd,et al.  Primary structures of the heterogeneous nuclear ribonucleoprotein A2, B1, and C2 proteins: a diversity of RNA binding proteins is generated by small peptide inserts. , 1989, Proceedings of the National Academy of Sciences of the United States of America.

[31]  I. Waizenegger,et al.  The conserved carboxy-terminal cysteine of nuclear lamins is essential for lamin association with the nuclear envelope , 1989, The Journal of cell biology.

[32]  R. Morimoto,et al.  Mutational analysis of the human HSP70 protein: distinct domains for nucleolar localization and adenosine triphosphate binding , 1989, The Journal of cell biology.

[33]  E. Nigg,et al.  A somatic cell-derived system for studying both early and late mitotic events in vitro. , 1989, Journal of cell science.

[34]  C. Dang,et al.  Nuclear and nucleolar targeting sequences of c-erb-A, c-myb, N-myc, p53, HSP70, and HIV tat proteins. , 1989, The Journal of biological chemistry.

[35]  H. Prats,et al.  Protein kinase NII and the regulation of rDNA transcription in mammalian cells. , 1989, Nucleic acids research.

[36]  H. Pollard,et al.  Cloning and sequencing of the human nucleolin cDNA , 1989, FEBS letters.

[37]  Mich~le Caizergues-Ferrer,et al.  Nucleolin from Xenopus laevis: cDNA cloning and expression during development. , 1989, Genes & development.

[38]  C. Lehner,et al.  Major nucleolar proteins shuttle between nucleus and cytoplasm , 1989, Cell.

[39]  M. Maki,et al.  Sequence requirements for nucleolar localization of human T cell leukemia virus type I pX protein, which regulates viral RNA processing , 1988, Cell.

[40]  F. McKeon,et al.  Mutations in the nuclear lamin proteins resulting in their aberrant assembly in the cytoplasm. , 1988, The EMBO journal.

[41]  F. Amalric,et al.  A major nucleolar protein, nucleolin, induces chromatin decondensation by binding to histone H1. , 1988, European journal of biochemistry.

[42]  A. Seiter,et al.  Identification of domains involved in nuclear uptake and histone binding of protein N1 of Xenopus laevis. , 1988, The EMBO journal.

[43]  H. Bourbon,et al.  Structure of the mouse nucleolin gene. The complete sequence reveals that each RNA binding domain is encoded by two independent exons. , 1988, Journal of molecular biology.

[44]  W. Richardson,et al.  Nuclear protein migration involves two steps: Rapid binding at the nuclear envelope followed by slower translocation through nuclear pores , 1988, Cell.

[45]  D. Newmeyer,et al.  Nuclear import can be separated into distinct steps in vitro: Nuclear pore binding and translocation , 1988, Cell.

[46]  F. Amalric,et al.  Phosphorylation of nucleolin by a nucleolar type NII protein kinase. , 1987, Biochemistry.

[47]  J. Teissié,et al.  Basic fibroblast growth factor enters the nucleolus and stimulates the transcription of ribosomal genes in ABAE cells undergoing G0----G1 transition. , 1987, Proceedings of the National Academy of Sciences of the United States of America.

[48]  H. Bourbon,et al.  RNA binding fragments from nucleolin contain the ribonucleoprotein consensus sequence. , 1987, The Journal of biological chemistry.

[49]  H. Okayama,et al.  High-efficiency transformation of mammalian cells by plasmid DNA. , 1987, Molecular and cellular biology.

[50]  S. Munro,et al.  A C-terminal signal prevents secretion of luminal ER proteins , 1987, Cell.

[51]  H. Bourbon,et al.  Nucleolin, the major nucleolar protein of growing eukaryotic cells: an unusual protein structure revealed by the nucleotide sequence. , 1987, Proceedings of the National Academy of Sciences of the United States of America.

[52]  J. Kleinschmidt,et al.  Molecular characterization of a karyophilic, histone‐binding protein: cDNA cloning, amino acid sequence and expression of nuclear protein N1/N2 of Xenopus laevis. , 1986, The EMBO journal.

[53]  M. Olson,et al.  Association of protein C23 with rapidly labeled nucleolar RNA. , 1986, Biochemistry.

[54]  S. H. Ghaffari,et al.  Protein and cDNA sequence of a glycine-rich, dimethylarginine-containing region located near the carboxyl-terminal end of nucleolin (C23 and 100 kDa). , 1986, The Journal of biological chemistry.

[55]  S. H. Wilson,et al.  Structure of rodent helix-destabilizing protein revealed by cDNA cloning. , 1986, The Journal of biological chemistry.

[56]  G K Lewis,et al.  Isolation of monoclonal antibodies specific for human c-myc proto-oncogene product , 1985, Molecular and cellular biology.

[57]  N. Gas,et al.  Correlation between rDNA transcription and distribution of a 100 kD nucleolar protein in CHO cells. , 1985, Experimental cell research.

[58]  H. Zentgraf,et al.  Co-existence of two different types of soluble histone complexes in nuclei of Xenopus laevis oocytes. , 1985, The Journal of biological chemistry.

[59]  Prof. Dr. Asen A. Hadjiolov The Nucleolus and Ribosome Biogenesis , 1985, Cell Biology Monographs.

[60]  S. Munro,et al.  Use of peptide tagging to detect proteins expressed from cloned genes: deletion mapping functional domains of Drosophila hsp 70. , 1984, The EMBO journal.

[61]  C. Feldherr,et al.  Movement of a karyophilic protein through the nuclear pores of oocytes , 1984, The Journal of cell biology.

[62]  William D. Richardson,et al.  A short amino acid sequence able to specify nuclear location , 1984, Cell.

[63]  M. Olson,et al.  Distribution of proteins among chromatin components of nucleoli. , 1983, Biochemistry.

[64]  M. Olson,et al.  Phosphorylation of acid-soluble nucleolar proteins of Novikoff hepatoma ascites cells in vivo. , 1974, The Journal of biological chemistry.

[65]  R. Laskey,et al.  Nuclear targeting sequences--a consensus? , 1991, Trends in biochemical sciences.

[66]  T. Hunt,et al.  Cyclins and their partners during Xenopus oocyte maturation. , 1991, Cold Spring Harbor symposia on quantitative biology.

[67]  C. Lehner,et al.  Nuclear substructure antigens. Monoclonal antibodies against components of nuclear matrix preparations. , 1986, Experimental cell research.