Using Entropy Leads to a Better Understanding of Biological Systems
暂无分享,去创建一个
[1] Chien-Chih Chen,et al. New entropy-based method for variables selection and its application to the debris-flow hazard assessment , 2007 .
[2] P. Bolhuis,et al. Sampling the multiple folding mechanisms of Trp-cage in explicit solvent , 2006, Proceedings of the National Academy of Sciences.
[3] Namhee Kim,et al. RAGPOOLS: RNA-As-Graph-Pools - a web server for assisting the design of structured RNA pools for in vitro selection , 2007, Bioinform..
[4] Ariel Caticha,et al. From Information Geometry to Newtonian Dynamics , 2007, 0710.1071.
[5] E. Jaynes. Information Theory and Statistical Mechanics , 1957 .
[6] R. T. Cox,et al. The Algebra of Probable Inference , 1962 .
[7] Adom Giffin. Maximum Entropy: The Universal Method for Inference , 2008 .
[8] C T Shih,et al. Mean-field HP model, designability and alpha-helices in protein structures. , 2000, Physical review letters.
[9] A. Caticha. From Inference to Physics , 2008, 0808.1260.
[10] K Schulten,et al. VMD: visual molecular dynamics. , 1996, Journal of molecular graphics.
[11] C. R. Rao,et al. Information and the Accuracy Attainable in the Estimation of Statistical Parameters , 1992 .
[12] Shun-ichi Amari,et al. Methods of information geometry , 2000 .
[13] X. Le,et al. Selection and analytical applications of aptamers , 2006 .
[14] R. T. Cox. Probability, frequency and reasonable expectation , 1990 .
[15] C. Tseng. Entropic criterion for model selection , 2006, cond-mat/0604027.
[16] A. Owens,et al. The binding of vincristine, vinblastine and colchicine to tubulin. , 1972, Biochemical and biophysical research communications.
[17] W. James. Aptamers in the virologists' toolkit. , 2007, The Journal of general virology.
[18] K. Dill. Theory for the folding and stability of globular proteins. , 1985, Biochemistry.
[19] R. Baierlein. Probability Theory: The Logic of Science , 2004 .
[20] F. Ochsenbein,et al. A New Consensus Sequence for Phosphatidylserine Recognition by Annexins* , 2002, The Journal of Biological Chemistry.
[21] V. Pande,et al. Multiplexed-replica exchange molecular dynamics method for protein folding simulation. , 2003, Biophysical journal.
[22] David Chandler,et al. Transition path sampling: throwing ropes over rough mountain passes, in the dark. , 2002, Annual review of physical chemistry.
[23] Ariel Caticha. Maximum entropy, fluctuations and priors , 2001 .
[24] Ariel Caticha,et al. Updating Probabilities with Data and Moments , 2007, ArXiv.
[25] C. Dellago,et al. Transition Path Sampling , 2005 .
[26] W. B. Derry,et al. Taxol differentially modulates the dynamics of microtubules assembled from unfractionated and purified beta-tubulin isotypes. , 1997, Biochemistry.
[27] C. Rodr. Entropic Priors , 1991 .
[28] Jonathan Y. Mane,et al. Entropic Fragment‐Based Approach to Aptamer Design , 2011, Chemical biology & drug design.
[29] Jonathan Y. Mane,et al. Quantitative analysis of the effect of tubulin isotype expression on sensitivity of cancer cell lines to a set of novel colchicine derivatives , 2010, Molecular Cancer.
[30] Shun-ichi Amari,et al. Differential-geometrical methods in statistics , 1985 .
[31] C. Dellago,et al. Transition path sampling and the calculation of rate constants , 1998 .
[32] M. Stone,et al. In silico selection of RNA aptamers , 2009, Nucleic acids research.
[33] Ariel Caticha,et al. Using Relative Entropy to Find Optimal Approximations: an Application to Simple Fluids , 2008, ArXiv.
[34] E. T. Jaynes,et al. Where do we Stand on Maximum Entropy , 1979 .
[35] Rodney W. Johnson,et al. Axiomatic derivation of the principle of maximum entropy and the principle of minimum cross-entropy , 1980, IEEE Trans. Inf. Theory.
[36] R. Johnson,et al. Properties of cross-entropy minimization , 1981, IEEE Trans. Inf. Theory.
[37] B. Sullenger,et al. Aptamers: an emerging class of therapeutics. , 2005, Annual review of medicine.
[38] T. Schlick,et al. A computational proposal for designing structured RNA pools for in vitro selection of RNAs. , 2007, RNA.
[39] J. Wheeler. Information, physics, quantum: the search for links , 1999 .
[40] David Hinkley,et al. Theory of Statistical Estimation: The 1925 Paper , 1980 .
[41] Jiawei Han,et al. Data Mining: Concepts and Techniques, Second Edition , 2006, The Morgan Kaufmann series in data management systems.
[42] Hoong-Chien Lee,et al. From laws of inference to protein folding dynamics. , 2010, Physical review. E, Statistical, nonlinear, and soft matter physics.
[43] James Andrew McCammon,et al. Ligand-receptor interactions , 1984, Comput. Chem..