Melissa S. Cline

发表

Integrating expression data with domain interaction networks

Dorothea Emig, Thomas Lengauer, Mario Albrecht, 2008, Bioinform..

Protein-based analysis of alternative splicing in the human genome

Ann E. Loraine, Melissa S. Cline, Gregg A. Helt, 2002, Proceedings. IEEE Computer Society Bioinformatics Conference.

NetAffx: Affymetrix probesets and annotations

Guoying Liu, Ann E. Loraine, Melissa S. Cline, 2003, Nucleic Acids Res..

The Cancer Genomics Hub (CGHub): overcoming cancer through the power of torrential data

Brian Craft, David Haussler, John Black, 2014, Database J. Biol. Databases Curation.

The UCSC Genome Browser database: extensions and updates 2011

Mary Goldman, David Haussler, Katrina Learned, 2011, Nucleic Acids Res..

The UCSC Genome Browser database: 2014 update

David Haussler, Katrina Learned, Brian J. Raney, 2013, Nucleic Acids Res..

GOlorize: a Cytoscape plug-in for network visualization with Gene Ontology-based layout and coloring

Benno Schwikowski, Tero Aittokallio, Melissa S. Cline, 2007, Bioinform..

Exploring Alternative Transcript Structure in the Humangenome Using Blocks and Interpro

Ann E. Loraine, Melissa S. Cline, Gregg A. Helt, 2003, J. Bioinform. Comput. Biol..

Abstract 5270: The UCSC Xena system for integrating and visualizing functional genomics

Mary Goldman, Brian Craft, David Haussler, 2016 .

Abstract B1-07: Using the UCSC Xena Platform to integrate, visualize, and analyze your own data in the context of large external genomic datasets

Mary Goldman, Brian Craft, David Haussler, 2015 .

THE EFFECTS OF ALTERNATIVE SPLICING ON TRANSMEMBRANE PROTEINS IN THE MOUSE GENOME

Ann E. Loraine, Melissa S. Cline, Michael A. Siani-Rose, 2003 .

Data Sharing and Reproducible Clinical Genetic Testing: Successes and Challenges

Can Zhang, Benedict Paten, Melissa S. Cline, 2017, PSB.

NetAffx: affymetrix probeset annotations

Guoying Liu, Ann E. Loraine, Stephen A. Chervitz, 2002, SAC '02.

AN EMPIRICAL STUDY OF THE BRANCH COVERAGE OF DIFFERENT FAULT CLASSES

Melissa S. Cline, Linda L. Werner, M. Cline, 1994 .

ENCODE whole-genome data in the UCSC genome browser (2011 update)

David Haussler, Katrina Learned, Brian J. Raney, 2010, Nucleic Acids Res..

Integrative Visual Analysis of the Effects of Alternative Splicing on Protein Domain Interaction Networks

Dorothea Emig, Thomas Lengauer, Mario Albrecht, 2008, J. Integr. Bioinform..

The UCSC Genome Browser database: update 2011

Mary Goldman, David Haussler, Katrina Learned, 2010, Nucleic Acids Res..

RBPmap: a web server for mapping binding sites of RNA-binding proteins

Yael Mandel-Gutfreund, Inbal Paz, Melissa S. Cline, 2014, Nucleic Acids Res..

The UCSC Genome Browser database: extensions and updates 2013

Mary Goldman, David Haussler, Katrina Learned, 2012, Nucleic Acids Res..

ANOSVA: a statistical method for detecting splice variation from expression data

Simon Cawley, Gang Lu, Melissa S. Cline, 2005, ISMB.

Protein sequence alignment reliability: prediction and measurement

Melissa S. Cline, Kevin Karplus, 2000 .

Structure-Based Comparison of Four Eukaryotic Genomes

Guoying Liu, Ann E. Loraine, Melissa S. Cline, 2001, Pacific Symposium on Biocomputing.

The UCSC Cancer Genomics Browser: update 2015

Mary Goldman, Brian Craft, David Haussler, 2014, Nucleic Acids Res..

Rapid and efficient analysis of 20,000 RNA-seq samples with Toil

Mary Goldman, Brian Craft, Brian O'Connor, 2016, bioRxiv.

Predicting reliable regions in protein sequence alignments

Melissa S. Cline, Richard Hughey, Kevin Karplus, 2002, Bioinform..

Using bioinformatics to predict the functional impact of SNVs

Melissa S. Cline, Rachel Karchin, M. Cline, 2011, Bioinform..

The UCSC Cancer Genomics Browser: update 2015

Mary Goldman, Brian Craft, David Haussler, 2014, Nucleic Acids Res..

Affy exon tissues: exon levels in normal tissues in human, mouse and rat

Melissa S. Cline, Pauline A. Fujita, Kayla E. Smith, 2009, Bioinform..

GPCR-GRAPA-LIB-a refined library of hidden Markov Models for annotating GPCRs

Guoying Liu, Melissa S. Cline, Michael A. Siani-Rose, 2003, Bioinform..

Gene structure-based splice variant deconvolution using a microarry platform

David Haussler, Gang Lu, Melissa S. Cline, 2003, ISMB.

Consistency of BRCA1 and BRCA2 Variant Classifications Among Clinical Diagnostic Laboratories

David Haussler, Benedict Paten, Melissa S. Cline, 2017, JCO precision oncology.

Abstract LB-212: Treehouse Childhood Cancer Project: a resource for sharing and multiple cohort analysis of pediatric cancer genomics data

David Haussler, Jingchun Zhu, Katrina Learned, 2015 .

ON ALIGNMENT SHIFT AND ITS MEASURES

Melissa S. Cline, Kevin Karplus, 1998 .