J. Clark

发表

Microbial communities across nearshore to offshore coastal transects are primarily shaped by distance and temperature.

Z. Johnson, D. Hunt, Jinfen Pan, 2019, Environmental microbiology.

Biases in the estimation of size-dependent mortality models: advantages of a semiparametric approach

G. Vieilledent, B. Courbaud, J. Dhôte, 2009 .

Total C and N Pools and Fluxes Vary with Time, Soil Temperature, and Moisture Along an Elevation, Precipitation, and Vegetation Gradient in Southern Appalachian Forests

J. Vose, C. Miniat, J. Knoepp, 2018, Ecosystems.

Stochastic Modeling for Velocity of Climate Change

Erin M. Schliep, A. Gelfand, J. Clark, 2015, Journal of Agricultural, Biological, and Environmental Statistics.

New Approaches to FIA data for understanding distribution, abundance, and response to climate change

A. Gelfand, K. Zhu, Souparno Ghosh, 2012 .

Forest-Tree Growth Rates and Probability of Gap Origin: A Comment

J. Clark, 1991 .

Terrestrial biotic responses to environmental change and feedbacks to climate

James S. Clark, Contributors, J. Overpeck, 1996 .

The Role of Seed Dispersal in Plant Populations : Perspectives and Advances in a Changing World Low-intensity logging and hunting have long-term effects on seed dispersal but not fecundity in Afrotropical forests

C. Clark, J. Poulsen, C. Nuñez, 2019 .

Plant migration and climate change

James S. Clark, James M. Dyer, M. B. Davis, 1997 .

Inferring long‐distance dispersal and topographic barriers during post‐glacial colonization from the genetic structure of red maple (Acer rubrum L.) in New England

J. McLachlan, P. Manos, Paul F. Gugger, 2008 .

Fire, climate change, and forest processes during the past 2000 years

J. Clark, 1993 .

Coordinated approaches to quantify long‐term ecosystem dynamics in response to global change

Christopher B. Field, Edward B. Rastetter, Mark G. Tjoelker, 2011 .

Continent-wide tree fecundity driven by indirect climate effects

J. Swenson, J. Franklin, W. Schlesinger, 2020, Nature Communications.

Neutral theory (communication arising): The stability of forest biodiversity

J. McLachlan, J. Clark, 2004, Nature.

Coordinated approaches to quantify long‐term ecosystem dynamics in response to global change

James S. Clark, E. Davidson, J. Six, 2011 .

Twentieth-century climate change, fire suppression, and forest production and decomposition in northwestern Minnesota

J. Clark, 1990 .

Introduction to drought and US forests: Impacts and potential management responses☆

J. Vose, C. Luce, J. Clark, 2016 .

Effects of dispersal, shrubs, and density-dependent mortality on seed and seedling distributions in temperate forests

J. R. Lambers, J. Clark, 2003 .

OF POISON IVY ( TOXICODENDRON RADICANS ) TO ELEVATED ATMOSPHERIC CO 2 : REPLY

L. Ziska, R. Sicher, W. Schlesinger, 2007 .

Climate and Indian effects on southern Ontario forests: a reply to Campbell and McAndrews

J. Clark, 1995 .

Limits to reproduction and seed size-number trade-offs that shape forest dominance and future recovery

Eliot J. B. McIntire, James S. Clark, J. Zimmerman, 2022, Nature Communications.

Presettlement analogs for Quaternary fire regimes in eastern North America

J. Clark, T. Hussey, P. Royall, 1996 .

Greater seed production in elevated CO2 is not accompanied by reduced seed quality in Pinus taeda L.

James S. Clark, R. B. Jackson, R. Oren, 2010 .

Pervasive shifts in forest dynamics in a changing world

James S. Clark, R. B. Jackson, B. Poulter, 2020, Science.

Striking the right balance in right whale conservation

Jason J. Roberts, B. Mate, S. Loarie, 2009 .

The past 20 years of ecology and evolution.

A. Read, J. Clark, 2006, Trends in ecology & evolution.

Assimilating multi-source uncertainties of a parsimonious conceptual hydrological model using hierarchical Bayesian modeling

James S. Clark, J. Vose, Wei Wu, 2010 .

Particle-Size Evidence for Source Areas of Charcoal Accumulation in Late Holocene Sediments of Eastern North American Lakes

J. Clark, P. Royall, 1995, Quaternary Research.

Total C and N Pools and Fluxes Vary with Time, Soil Temperature, and Moisture Along an Elevation, Precipitation, and Vegetation Gradient in Southern Appalachian Forests

J. Vose, C. Miniat, J. Knoepp, 2018, Ecosystems.

Hydraulic time constants for transpiration of loblolly pine at a free-air carbon dioxide enrichment site.

James S. Clark, David M Bell, James S Clark, 2013, Tree physiology.

An Introduction to Sediment Records of Biomass Burning

J. Clark, 1997 .

The Development of a Tidal Marsh: Upland and Oceanic Influences

W. A. Patterson, J. Clark, 1985 .

Pollen, Pb-210, and opaque spherules; an integrated approach to dating and sedimentation in the intertidal environment

W. A. Patterson, J. Clark, 1984 .

Rising CO2 Levels and the Fecundity of Forest Trees

S. LaDeau, J. Clark, 2001, Science.

Beyond variance: simple random distributions are not a good proxy for intraspecific variability in systems with environmental structure

R. Pélissier, G. Vieilledent, N. Rüger, 2022, bioRxiv.

FECUNDITY OF TREES AND THE COLONIZATION–COMPETITION HYPOTHESIS

James S. Clark, I. Ibáñez, S. LaDeau, 2004 .

Ecological Archives M080-020-A1

Moran, J. HilleRisLambers, B. Courbaud, 2010 .

Facing Short-Term Extrapolation with Long-Term Evidence: Holocene Fire in the North-Eastern US Forests

J. Clark, 1997 .

Globally, tree fecundity exceeds productivity gradients.

Eliot J. B. McIntire, James S. Clark, J. Zimmerman, 2022, Ecology letters.

The relative influences of host plant genotype and yearly abiotic variability in determining herbivore abundance

T. Whitham, A. Whipple, L. Evans, 2012, Oecologia.

A PREDICTIVE FRAMEWORK TO UNDERSTAND FOREST RESPONSES TO 1 GLOBAL CHANGE 2 3

James S. Clark, M. Dietze, S. McMahon, 2009 .

CHANGING THE GAP DYNAMICS PARADIGM: VEGETATIVE REGENERATION CONTROL ON FOREST RESPONSE TO DISTURBANCE

Michael C. Dietze, James S. Clark, M. Dietze, 2008 .

Biomass and toxicity responses of poison ivy (Toxicodendron radicans) to elevated atmospheric CO2

L. Ziska, R. Sicher, W. Schlesinger, 2006 .

Niche Shifts From Trees to Fecundity to Recruitment That Determine Species Response to Climate Change

C. Woodall, T. Qiu, Shubhi Sharma, 2021, Frontiers in Ecology and Evolution.

A vignette on model-based quantile regression: analysing excess zero response

S. Tokdar, J. Clark, E. Cunningham, 2020 .

Using short-term measures of behaviour to estimate long-term fitness of southern elephant seals

James S. Clark, M. Hindell, D. Costa, 2014 .

Evidence from Individual Inference for High-Dimensional Coexistence: Long-Term Experiments on Recruitment Response

Q. Read, A. Powell, J. Clark, 2012, PloS one.

Models for Ecological Data: An Introduction

James S. Clark, J. Clark, 2007 .

Effects of climate and atmospheric CO2 partial pressure on the global distribution of C4 grasses: present, past, and future

James S. Clark, G. Collatz, J. Berry, 1998, Oecologia.

Enhanced Understanding of Infectious Diseases by Fusing Multiple Datasets: A Case Study on Malaria in the Western Brazilian Amazon Region

K. Zhao, D. Valle, J. Clark, 2011, PloS one.

Accounting for uncertainty in ecological analysis: the strengths and limitations of hierarchical statistical modeling.

Catherine A Calder, Noel Cressie, Catherine A. Calder, 2009, Ecological applications : a publication of the Ecological Society of America.

Why environmental scientists are becoming Bayesians

James S. Clark, J. Clark, 2004 .

Clustering Species With Residual Covariance Matrix in Joint Species Distribution Models

J. Arbel, A. Guglielmi, W. Thuiller, 2021, Frontiers in Ecology and Evolution.

A future for models and data in environmental science.

James S. Clark, A. Gelfand, J. Clark, 2006, Trends in ecology & evolution.

PERSPECTIVES Why environmental scientists are becoming Bayesians

James S. Clark, J. Clark, 2005 .

I D EAS AND PERSPECT IVES Why environmental scientists are becoming Bayesians

James S. Clark, J. Clark, 2004 .

Inference in incidence, infection, and impact: Co-infection of multiple hosts by multiple pathogens

M. Hersh, J. Clark, 2009 .

Pathogen regulation of plant diversity via effective specialization.

R. Vilgalys, M. Hersh, M. Benitez, 2013, Trends in ecology & evolution.

Individual variability in tree allometry determines light resource allocation in forest ecosystems: a hierarchical Bayesian approach

Ghislain Vieilledent, James S. Clark, Benoît Courbaud, 2010, Oecologia.

References and Notes Supporting Online Material Individuals and the Variation Needed for High Species Diversity in Forest Trees

James S. Clark, James S Clark, R. Dalbey, 2022 .

Predicting population survival under future climate change: density dependence, drought and extraction in an insular bighorn sheep.

James S. Clark, James S Clark, Fernando Colchero, 2009, The Journal of animal ecology.

Predicting biodiversity change: outside the climate envelope, beyond the species-area curve.

James S. Clark, M. Dietze, Michael S. Wolosin, 2006, Ecology.

Stability of forest biodiversity

James S. Clark, Jason S. McLachlan, J. McLachlan, 2003, Nature.

Why Trees Migrate So Fast: Confronting Theory with Dispersal Biology and the Paleorecord

James S. Clark, J. Clark, 1998, The American Naturalist.

Reid's Paradox of Rapid Plant Migration Dispersal theory and interpretation of paleoecological records

George C. Hurtt, James S. Clark, Eugene W. Schupp, 1998 .

EXPLOITING TEMPORAL VARIABILITY TO UNDERSTAND TREE RECRUITMENT RESPONSE TO CLIMATE CHANGE

I. Ibáñez, S. LaDeau, J. R. Lambers, 2007 .

The benefits of seed banking for red maple (Acer rubrum) : maximizing seedling recruitment

J. R. Lambers, J. Clark, 2005 .

IMPLICATIONS OF SEED BANKING FOR RECRUITMENT OF SOUTHERN APPALACHIAN WOODY SPECIES

Michael Lavine, James S. Clark, Janneke Hille Ris Lambers, 2005 .

Conservation Efforts May Increase Malaria Burden in the Brazilian Amazon

D. Valle, J. Clark, 2013, PloS one.

Biomass and toxicity responses of poison ivy (Toxicodendron radicans) to elevated atmospheric CO2.

L. Ziska, R. Sicher, W. Schlesinger, 2008, Proceedings of the National Academy of Sciences of the United States of America.

Particle Motion and the Theory of Charcoal Analysis: Source Area, Transport, Deposition, and Sampling

J. Clark, 1988, Quaternary Research.

Joint Temporal Point Pattern Models for Proximate Species Occurrence in a Fixed Area Using Camera Trap Data

Erin M. Schliep, A. Gelfand, R. Kays, 2018, Journal of Agricultural, Biological and Environmental Statistics.

Joint Temporal Point Pattern Models for Proximate Species Occurrence in a Fixed Area Using Camera Trap Data

Alan E. Gelfand, Roland Kays, James S. Clark, 2018, Journal of Agricultural, Biological and Environmental Statistics.

INCORPORATING MULTIPLE SOURCES OF STOCHASTICITY INTO DYNAMIC POPULATION MODELS

Peter Müller, Michael Lavine, Catherine A. Calder, 2003 .

Individual-scale variation, species-scale differences: inference needed to understand diversity.

Kai Zhu, Denis Valle, Carl F. Salk, 2011, Ecology letters.

Generalized joint attribute modeling for biodiversity analysis: median-zero, multivariate, multifarious data

James S. Clark, Diana R. Nemergut, Bijan Seyednasrollah, 2017 .

POPULATION TIME SERIES: PROCESS VARIABILITY, OBSERVATION ERRORS, MISSING VALUES, LAGS, AND HIDDEN STATES

James S. Clark, Ottar N. Bjørnstad, O. Bjørnstad, 2004 .

UNCERTAINTY AND VARIABILITY IN DEMOGRAPHY AND POPULATION GROWTH: A HIERARCHICAL APPROACH

James S. Clark, J. Clark, 2003 .

The relative influences of host plant genotype and yearly abiotic variability in determining herbivore abundance

James S. Clark, T. Whitham, A. Whipple, 2011, Oecologia.

Genetic evidence for hybridization in red oaks (Quercus sect. Lobatae, Fagaceae).

J. Willis, E. Moran, J. Clark, 2012, American journal of botany.

Effects of drought on forests and rangelands in the United States: a comprehensive science synthesis

J. Vose, T. Patel-Weynand, C. Luce, 2016 .

Joint Modeling of Climate Niches for Adult and Juvenile Trees

A. Gelfand, K. Zhu, Souparno Ghosh, 2016 .

Predictive models for radial sap flux variation in coniferous, diffuse-porous and ring-porous temperate trees.

C. Miniat, A. B. Berdanier, J. Clark, 2016, Tree physiology.

Stratigraphic Charcoal Analysis on Petrographic Thin Sections: Application to Fire History in Northwestern Minnesota

J. Clark, 1988, Quaternary Research.

DROUGHT CYCLES AND LANDSCAPE RESPONSES TO PAST ARIDITY ON PRAIRIES OF THE NORTHERN GREAT PLAINS, USA

D. Engstrom, J. E. Almendinger, J. Donovan, 2002 .

Tree growth inference and prediction from diameter censuses and ring widths.

James S. Clark, James S Clark, Shannon LaDeau, 2007, Ecological applications : a publication of the Ecological Society of America.

Long-term CO2 enrichment of a forest ecosystem: implications for forest regeneration and succession.

James S Clark, William H Schlesinger, W. Schlesinger, 2007, Ecological applications : a publication of the Ecological Society of America.

Joint Species Distribution Modeling: Dimension Reduction Using Dirichlet Processes

Alan E. Gelfand, Daniel Taylor-Rodriguez, James S. Clark, 2017 .

The impacts of increasing drought on forest dynamics, structure, and biodiversity in the United States

James S. Clark, Frank W Davis, David M Bell, 2016, Global change biology.

Estimating the mass flux of charcoal from sedimentary records: effects of particle size, morphology, and orientation

J. Clark, T. Hussey, 1996 .

LOCAL AND REGIONAL SEDIMENT CHARCOAL EVIDENCE FOR FIRE REGIMES IN PRESETTLEMENT NORTH-EASTERN NORTH AMERICA

J. Clark, P. Royall, 1996 .

The Role of Fire During Climate Change in an Eastern Deciduous Forest at Devil's Bathtub, New York

C. Chumbley, J. Clark, P. Royall, 1996 .

15 - Scaling the Population Level: Effects of Species Composition and Population Structure

James S. Clark, J. Clark, 1993 .

Transformation of a northern hardwood forest by aboriginal (Iroquois) fire: charcoal evidence from Crawford Lake, Ontario, Canada

J. Clark, P. Royall, 1995 .

Effect of climate change on fire regimes in northwestern Minnesota

James S. Clark, J. Clark, 1988, Nature.

Sediment records of biomass burning and global change

James S. Clark, J. Clark, 1997 .

FIRE AND CLIMATE CHANGE DURING THE LAST 750 YR IN NORTHWESTERN MINNESOTA

James S. Clark, J. Clark, 1990 .

Failure to migrate: lack of tree range expansion in response to climate change

James S. Clark, C. Woodall, K. Zhu, 2012 .

Geographic and temporal variations in fire history in boreal ecosystems of Alaska

J. Lynch, M. Edwards, B. Finney, 2002 .

EFFECTS OF HOLOCENE CLIMATE CHANGE ON THE C4 GRASSLAND/WOODLAND BOUNDARY IN THE NORTHERN PLAINS, USA

J. Lynch, E. Grimm, J. Clark, 2001 .

The Role of Paleofire in Boreal and Other Cool-Coniferous Forests

P. Richard, J. Clark, 1996 .

Background and Local Charcoal in Sediments: Scales of Fire Evidence in the Paleorecord

W. A. Patterson, J. Clark, 1997 .

Ecological disturbance as a renewal process: theory and application to fire history

James S. Clark, J. Clark, 1989 .

Charcoal production, dispersal, and deposition from the Fort Providence experimental fire: interpreting fire regimes from charcoal records in boreal forests

J. Lynch, B. Stocks, J. Clark, 2004 .

Fishing gear entanglement threatens recovery of critically endangered North Atlantic right whales

A. Knowlton, S. Kraus, P. Hamilton, 2022, Conservation Science and Practice.

Health of North Atlantic right whales Eubalaena glacialis over three decades: from individual health to demographic and population health trends

Heather M. Pettis, A. Knowlton, S. Kraus, 2016 .

Using Hierarchical Bayes to Understand Movement, Health, and Survival in the Endangered North Atlantic Right Whale

James S. Clark, Robert S. Schick, Scott D. Kraus, 2013, PloS one.

Effects of Model Formulation on Estimates of Health in Individual Right Whales (Eubalaena glacialis).

Len Thomas, John Harwood, James S Clark, 2016, Advances in experimental medicine and biology.

HIERARCHICAL BAYES FOR STRUCTURED, VARIABLE POPULATIONS: FROM RECAPTURE DATA TO LIFE‐HISTORY PREDICTION

James S. Clark, Helen Hays, Gonçalo Ferraz, 2005 .

Seed Dispersal Near and Far: Patterns Across Temperate and Tropical Forests

Janneke HilleRisLambers, James S. Clark, J. HilleRisLambers, 1999 .

Biological indices of soil quality: an ecosystem case study of their use

James S. Clark, D. Coleman, J. Knoepp, 2000 .

Survival of tree seedlings across space and time: estimates from long‐term count data

M. Lavine, B. Beckage, J. Clark, 2005 .

Landscape interactions among nitrogen mineralization, species composition, and long-term fire frequency

James S. Clark, J. Clark, 1990 .

Fire in boreal ecosystems of Eurasia: First results of the Bor Forest island fire experiment, Fire Research Campaign Asia-North (FIRESCAN)

James S. Clark, P. Angelstam, P. Angelstam, 1994 .

Density-independent mortality, density compensation, gap formation, and self-thinning in plant populations

James S. Clark, J. Clark, 1992 .

Disturbance and Population Structure on the Shifting Mosaic Landscape

J. Clark, 1991 .

Genetic variation in germination, growth, and survivorship of red maple in response to subambient through elevated atmospheric CO2

W. Schlesinger, J. Mohan, J. Clark, 2004 .

A history of fire in Australia

James S. Clark, A. Gill, R. Bradstock, 2002 .

The effects of deer herbivory and forest type on tree recruitment vary with plant growth stage

I. Ibáñez, M. Bugalho, J. Clark, 2013 .

Seed predation and climate impacts on reproductive variation in temperate forests of the southeastern USA

James S. Clark, D. Bell, J. Clark, 2016, Oecologia.

Resolving the biodiversity paradox.

James S. Clark, P. Agarwal, M. Dietze, 2007, Ecology letters.

STAGES AND SPATIAL SCALES OF RECRUITMENT LIMITATION IN SOUTHERN APPALACHIAN FORESTS

James S. Clark, Leslie Wood, Eric Macklin, 1998 .

Estimating seed and pollen movement in a monoecious plant: a hierarchical Bayesian approach integrating genetic and ecological data

James S. Clark, James S Clark, E. Moran, 2011, Molecular ecology.

High‐dimensional coexistence based on individual variation: a synthesis of evidence

Janneke HilleRisLambers, Sean M. McMahon, Denis Valle, 2010 .

Testing Disturbance Theory with Long-Term Data: Alternative Life-History Solutions to the Distribution of Events

J. Clark, 1996, The American Naturalist.

Understanding movement data and movement processes: current and emerging directions.

Lucas N Joppa, Dalia A. Conde, James S Clark, 2008, Ecology letters.

Ecological forecasting and data assimilation in a data-rich era.

Shenfeng Fei, Chao Gao, Colin Tucker, 2011, Ecological applications : a publication of the Ecological Society of America.

Where Resource‐Acquisitive Species Are Located: The Role of Habitat Heterogeneity

B. Seyednasrollah, J. Clark, 2020, Geophysical Research Letters.

Rethinking the nature of intraspecific variability and its consequences on species coexistence

G. Maire, R. Pélissier, G. Vieilledent, 2022, bioRxiv.

On the Interpretations of Joint Modeling in Community Ecology.

J. Arbel, W. Thuiller, T. Münkemüller, 2021, Trends in ecology & evolution.

More than the sum of the parts: forest climate response from joint species distribution models.

Kai Zhu, Alan E Gelfand, James S Clark, 2014, Ecological applications : a publication of the Ecological Society of America.

Distinct Community-Wide Responses to Forecasted Climate Change in Afrotropical Forests

J. Poulsen, L. White, C. Nuñez, 2022, Frontiers in Ecology and Evolution.

Is there tree senescence? The fecundity evidence

J. Zimmerman, J. Swenson, M. Uriarte, 2021, Proceedings of the National Academy of Sciences.

Capturing diversity and interspecific variability in allometries: A hierarchical approach

James S. Clark, M. Dietze, Michael S. Wolosin, 2008 .

Individual-scale inference to anticipate climate-change vulnerability of biodiversity

Kai Zhu, David M Bell, James S Clark, 2012, Philosophical Transactions of the Royal Society B: Biological Sciences.

Multidimensional trade-offs in species responses to disturbance: implications for diversity in a subtropical forest.

J. Zimmerman, M. Uriarte, Jill Thompson, 2012, Ecology.

Relationships Among Individual Plant Growth and the Dynamics of Populations and Ecosystems

J. Clark, 2018 .

Integration of ecological levels: individual plant growth, population mortality and ecosystem processes.

James S. Clark, J. Clark, 1990 .

North American tree migration paced by climate in the West, lagging in the East

J. Swenson, J. Franklin, W. Schlesinger, 2022, Proceedings of the National Academy of Sciences.

MOLECULAR INDICATORS OF TREE MIGRATION CAPACITY UNDER RAPID CLIMATE CHANGE

James S. Clark, Jason S. McLachlan, J. McLachlan, 2005 .

Forecasting plant migration rates: managing uncertainty for risk assessment

Thomas Hovestadt, James S. Clark, Frank M. Schurr, 2003 .

Fecundity and Dispersal in Plant Populations: Implications for Structure and Diversity

Yuan Ji, J. Clark, 1995, The American Naturalist.

The emergent interactions that govern biodiversity change

James S. Clark, C. Scher, M. Swift, 2020, Proceedings of the National Academy of Sciences.

Evaluating the sources of potential migrant species: implications under climate change.

James S. Clark, M. Dietze, I. Ibáñez, 2008, Ecological applications : a publication of the Ecological Society of America.

Invasion by Extremes: Population Spread with Variation in Dispersal and Reproduction

James S. Clark, Lajos Horvath, Mark Lewis, 2001, The American Naturalist.

Changes in Biomass, Aboveground Net Primary Production, and Peat Accumulation following Permafrost Thaw in the Boreal Peatlands of Manitoba, Canada

J. Lynch, J. B. Adams, P. Camill, 2001, Ecosystems.

SEEDLING SURVIVAL AND GROWTH OF THREE FOREST TREE SPECIES: THE ROLE OF SPATIAL HETEROGENEITY

B. Beckage, J. Clark, 2003 .

Monitoring small mammal abundance using NEON data: are calibrated indices useful?

R. Kays, A. Parsons, J. Clark, 2022, Journal of Mammalogy.

The effects of elevated CO2 and nitrogen fertilization on stomatal conductance estimated from 11 years of scaled sap flux measurements at Duke FACE.

James S. Clark, R. Oren, D. Bell, 2013, Tree physiology.

Beyond neutral science.

James S Clark, J. Clark, 2009, Trends in ecology & evolution.

Why species tell more about traits than traits about species: predictive analysis.

James s. Clark, J. Clark, 2016, Ecology.

Foodwebs based on unreliable foundations: spatiotemporal masting merged with consumer movement, storage, and diet

James S. Clark, C. Nuñez, Bradley J. Tomasek, 2019, Ecological Monographs.

Climate change vulnerability of forest biodiversity: climate and competition tracking of demographic rates

James S. Clark, D. Bell, L. Nichols, 2011 .

Ecological and Evolutionary Consequences of Patchiness: A Marine-Terrestrial Perspective

James S. Clark, P. Marquet, M. Fortin, 1993 .

Estimating resource acquisition and at-sea body condition of a marine predator

James S. Clark, M. Hindell, M. Thums, 2013, The Journal of animal ecology.

Associations among arbuscular mycorrhizal fungi and seedlings are predicted to change with tree successional status.

James S Clark, Robert Muscarella, María Uriarte, 2018, Ecology.

Modelling the biological significance of behavioural change in coastal bottlenose dolphins in response to disturbance

James S. Clark, D. Lusseau, P. Thompson, 2013 .

Scaling Integral Projection Models for Analyzing Size Demography

Alan E. Gelfand, Souparno Ghosh, James S. Clark, 2013, 1312.7260.

Inference for Size Demography From Point Pattern Data Using Integral Projection Models

James S. Clark, A. Gelfand, Souparno Ghosh, 2012, Journal of agricultural, biological, and environmental statistics.

Prevalence and strength of density-dependent tree recruitment.

João V. D. Monteiro, C. Woodall, K. Zhu, 2015, Ecology.

Intra- and interspecific tree growth across a long altitudinal gradient in the Peruvian Andes.

M. Silman, C. Girardin, J. Rapp, 2012, Ecology.

Competition‐interaction landscapes for the joint response of forests to climate change

James S. Clark, D. Bell, K. Zhu, 2014, Global change biology.

Habitat–trait interactions that control response to climate change: North American ground beetles (Carabidae)

J. Swenson, T. Qiu, Aaron J. Bell, 2023, Global Ecology and Biogeography.

The coherence problem with the Unified Neutral Theory of Biodiversity.

James S Clark, J. Clark, 2012, Trends in ecology & evolution.

Pollen production by Pinus taeda growing in elevated atmospheric CO2

S. LaDeau, J. Clark, 2006 .

Pollen stratigraphic correlation and dating of barrier-beach peat sections

J. Overpeck, W. A. Patterson, T. Webb,, 1986 .

Hierarchical Modelling for the Environmental Sciences: Statistical Methods and Applications

James S. Clark, A. Gelfand, J. Clark, 2006 .

Estimating colonization potential of migrant tree species

M. Dietze, I. Ibáñez, J. Clark, 2009 .

Spatiotemporal sensitivity of thermal stress for monitoring canopy hydrological stress in near real-time

J. Domec, B. Seyednasrollah, J. Clark, 2019, Agricultural and Forest Meteorology.

Evaluating the impacts of multiple generalist fungal pathogens on temperate tree seedling survival.

R. Vilgalys, M. Hersh, J. Clark, 2012, Ecology.

Afrotropical Tree Communities May Have Distinct Responses to Forecasted Climate Change

J. Poulsen, C. Nuñez, J. Clark, 2019, bioRxiv.

Modeling change in forest biomass across the eastern US

Kai Zhu, Alan E. Gelfand, James S. Clark, 2016, Environmental and Ecological Statistics.

Disturbance and Vegetation Dynamics in Earth System Models: Workshop Report

James S. Clark, L. Kueppers, P. Wyckoff, 2018 .

Relationships between charcoal particles in air and sediments in west-central Siberia

J. Lynch, J. Goldammer, B. Stocks, 1998 .

Climate implications of biomass burning since the 19th century in eastern North America

P. Richard, B. Stocks, J. Clark, 1996 .

The ACER pollen and charcoal database

James S. Clark, Colin J. Courtney Mustaphi, N. Combourieu-Nebout, 2017 .

The ACER pollen and charcoal database

Sandy P. Harrison, Brian Huntley, Rob Marchant, 2017 .

On the estimation of spread rate for a biological population

James S. Clark, L. Horváth, M. Lewis, 2001 .

Models for Ecological Data

J. Clark, 2020 .

Long-term Perspectives on Lagged Ecosystem Responses to Climate Change: Permafrost in Boreal Peatlands and the Grassland/Woodland Boundary

James S. Clark, P. Camill, J. Clark, 2000, Ecosystems.

Overcoming data sparseness and parametric constraints in modeling of tree mortality: a new nonparametric Bayesian model

Sean M. McMahon, C. Jessica E. Metcalf, James S. Clark, 2009 .

Does predation contribute to tree diversity?

B. Beckage, J. Clark, 2005, Oecologia.

A long-term study of tree seedling recruitment in southern Appalachian forests: the effects of canopy gaps and shrub understories

B. Clinton, B. Beckage, B. Haines, 2000 .

Shifting Mosaic Metapopulation Dynamics

J. Clark, 1993 .

Modeling Community Dynamics Through Environmental Effects, Species Interactions and Movement

A. Gelfand, P. Marra, J. Clark, 2022, Journal of Agricultural, Biological and Environmental Statistics.

Understanding the continuous phenological development at daily time step with a Bayesian hierarchical space-time model: impacts of climate change and extreme weather events

James S. Clark, Junxiang Li, B. Seyednasrollah, 2020 .

COASTAL FOREST TREE POPULATIONS IN A CHANGING ENVIRONMENT, SOUTHEASTERN LONG ISLAND, NEW YORK'

J. Clark, 1986 .

Leaf phenology paradox: Why warming matters most where it is already warm

Bijan Seyednasrollah, Jennifer J. Swenson, James S. Clark, 2018 .

Inferential ecosystem models, from network data to prediction.

Pankaj Agarwal, Jun Yang, David M Bell, 2011, Ecological applications : a publication of the Ecological Society of America.

Multiyear drought-induced morbidity preceding tree death in southeastern U.S. forests.

James S Clark, A. B. Berdanier, Aaron B Berdanier, 2015, Ecological applications : a publication of the Ecological Society of America.

Temporal coexistence mechanisms contribute to the latitudinal gradient in forest diversity

Anthony R. Ives, James S. Clark, Margaret R. Metz, 2017, Nature.

Improving the Modeling of Disease Data from the Government Surveillance System: A Case Study on Malaria in the Brazilian Amazon

James S. Clark, Denis Valle, D. Valle, 2013, PLoS Comput. Biol..

Dynamism in the Barrier‐Beach Vegetation of Great South Beach, New York

J. Clark, 1986 .

Elevated CO2 and tree fecundity: the role of tree size, interannual variability, and population heterogeneity

James S. Clark, Shannon L. LaDeau, S. LaDeau, 2006 .

The relationship between growth and mortality for seven co‐occurring tree species in the southern Appalachian Mountains

James S. Clark, Peter H. Wyckoff, P. Wyckoff, 2002 .

Reconstructing historical ranges with fossil data at continental scales

James S. Clark, J. McLachlan, J. Clark, 2004 .

ESTIMATING POPULATION SPREAD: WHAT CAN WE FORECAST AND HOW WELL?

Janneke HilleRisLambers, Mark A. Lewis, James S. Clark, 2003 .

Divergent reproductive allocation trade‐offs with canopy exposure across tree species in temperate forests

A. B. Berdanier, J. Clark, 2016 .

Jointly modeling marine species to inform the effects of environmental change on an ecological community in the Northwest Atlantic

P. Halpin, Sarah M. Roberts, J. Clark, 2022, Scientific reports.

A Predictive Framework to Understand Forest Responses to Global Change

M. Dietze, S. McMahon, M. Hersh, 2009, Annals of the New York Academy of Sciences.

Disturbance Sensitivity Shapes Patterns of Tree Species Distribution in Afrotropical Lowland Rainforests More Than Climate or Soil

James S. Clark, J. Poulsen, C. Nuñez, 2019, bioRxiv.

Dynamics of soil CO2 efflux under varying atmospheric CO2 concentrations reveal dominance of slow processes

James S. Clark, S. Palmroth, R. Oren, 2017, Global change biology.

Climate Change Disequilibrium of Boreal Permafrost Peatlands Caused by Local Processes

P. Camill, J. Clark, 1998, The American Naturalist.

Disturbance and tree life history on the shifting mosaic landscape

James S. Clark, J. Clark, 1991 .

Effects of long-term water balances on fire regime, north-western Minnesota

J. Clark, 1989 .

Pelagic movements of pacific leatherback turtles (dermochelys coriacea) highlight the role of prey and ocean currents

Jason J. Roberts, F. Chai, H. Bailey, 2013 .

Stochastic Modeling for Velocity of Climate Change

Erin M. Schliep, A. Gelfand, J. Clark, 2015 .

Modeling spatially biased citizen science effort through the eBird database

Alan E. Gelfand, James S. Clark, Becky Tang, 2021, Environmental and Ecological Statistics.

Causes and consequences of unequal seedling production in forest trees: a case study in red oaks.

E. Moran, J. Clark, 2012, Ecology.

Carolina critters: a collection of camera trap data from wildlife surveys across North Carolina.

R. Kays, G. Hess, Stephanie G Schuttler, 2021, Ecology.

Process modeling for soil moisture using sensor network data

Paul G. Flikkema, Alan E. Gelfand, Souparno Ghosh, 2014 .

Tree phenology responses to winter chilling, spring warming, at north and south range limits

Carl F. Salk, James S. Clark, Jerry M. Melillo, 2014 .

Between-Site Differences in the Scale of Dispersal and Gene Flow in Red Oak

E. Moran, J. Clark, 2012, PloS one.

Biomass prediction using a density-dependent diameter distribution model

Erin M. Schliep, A. Gelfand, Bradley J. Tomasek, 2017 .

The most abundant mammals on Earth.

J. Clark, 2023, Trends in ecology & evolution.

Evaluating models of climate and forest vegetation

J. Clark, 1992 .

Tree growth inference and prediction when the point of measurement changes: modelling around buttresses in tropical forests

D. Clark, C. Metcalf, J. Clark, 2009, Journal of Tropical Ecology.

Beyond variance: simple random distributions are not a good proxy for intraspecific variability in systems with environmental structure

R. Pélissier, G. Vieilledent, N. Rüger, 2023, bioRxiv.

Dual impacts of climate change: forest migration and turnover through life history

Kai Zhu, Souparno Ghosh, Alan E Gelfand, 2014, Global change biology.

COEXISTENCE: HOW TO IDENTIFY TROPHIC TRADE-OFFS

Michael C. Dietze, James S. Clark, M. Dietze, 2003 .

Bayesian inference on age-specific survival for censored and truncated data.

James S. Clark, Fernando Colchero, F. Colchero, 2012, The Journal of animal ecology.

Predicting tree mortality from diameter growth : a comparison of maximum likelihood and Bayesian approaches

James S. Clark, Peter H. Wyckoff, P. Wyckoff, 2000 .

Dynamic Inverse Prediction and Sensitivity Analysis With High-Dimensional Responses: Application to Climate-Change Vulnerability of Biodiversity

D. Bell, K. Zhu, Matthew Kwit, 2013 .

Tree growth prediction using size and exposed crown area

James S. Clark, Peter H. Wyckoff, P. Wyckoff, 2005 .

Density-dependent mortality and the latitudinal gradient in species diversity

B. Beckage, J. R. Lambers, J. Clark, 2002, Nature.

Statistical modeling of seedling mortality

Michael Lavine, James S. Clark, Brian Beckage, 2002 .

Plant Dispersal and Migration

James S. Clark, B. Beckage, J. McLachlan, 2002 .

PERSPECT IVE Resolving the biodiversity paradox

I. Ibáñez, S. LaDeau, Mike, 2007 .

IDEA AND PERSPECTIVE Resolving the biodiversity paradox

James S. Clark, I. Ibáñez, S. LaDeau, 2007 .

How to measure mast seeding?

B. Courbaud, R. Calama, Michał Bogdziewicz, 2023, The New phytologist.

Pelagic movements of pacific leatherback turtles (dermochelys coriacea) highlight the role of prey and ocean currents

James S. Clark, Jason J. Roberts, F. Chai, 2013, Movement Ecology.

A scalable algorithm for dispersing population

Pankaj K. Agarwal, Sathish Govindarajan, James S. Clark, 2007, Journal of Intelligent Information Systems.

A scalable simulator for forest dynamics

Pankaj K. Agarwal, Sathish Govindarajan, James S. Clark, 2004, SCG '04.

Late-Holocene Vegetation and Coastal Processes at a Long Island Tidal Marsh

J. Clark, 1986 .

The k‐ZIG: Flexible Modeling for Zero‐Inflated Counts

Kai Zhu, Souparno Ghosh, Alan E Gelfand, 2012, Biometrics.

Quantifying global soil carbon losses in response to warming

Bart R. Johnson, L. B. Snoek, T. Crowther, 2016, Nature.

Forest drought as an emerging research priority

J. Vose, C. Luce, J. Clark, 2016, Global Change Biology.

Response of hydrology to climate change in the southern Appalachian Mountains using Bayesian inference

James S. Clark, J. Vose, Wei Wu, 2014 .

Interpreting recruitment limitation in forests.

J. Clark, J. HilleRisLambers, B. Beckage, 1999, American journal of botany.

Fire cycles in North American interior grasslands and their relation to prairie drought.

B. C. Hansen, J. Clark, K. Brown, 2005, Proceedings of the National Academy of Sciences of the United States of America.

Indirect Effects of Heavy Metals on Parasites May Cause Shifts in Snail Species Compositions

H. Lefcort, K. A. Bond, J. Clark, 2002, Archives of environmental contamination and toxicology.

Masting is uncommon in trees that depend on mutualist dispersers in the context of global climate and fertility gradients

Eliot J. B. McIntire, J. Zimmerman, J. Swenson, 2023, Nature Plants.

Learning from monitoring networks: Few-large vs. many-small plots and multi-scale analysis

D. Barnett, J. Clark, Becky Tang, 2023, Frontiers in Ecology and Evolution.

STAGES AND SPATIAL SCALES OF RECRUITMENT LIMITATION IN SOUTHERN APPALACHIAN FORESTS

Eric Macklin, L. Wood, J. Clark, 1998 .

The seasonal timing of warming that controls onset of the growing season

Carl F. Salk, J. Melillo, J. Mohan, 2014, Global change biology.

Application of a Full Hierarchical Bayesian Model in Assessing Streamflow Response to a Climate Change Scenario at the Coweeta Basin, NC, USA

Wu Wei, James S. Clark, James M. Vose, 2012 .

Pathogen regulation of plant diversity via effective specialization.

R. Vilgalys, M. Hersh, M. Benitez, 2013, Trends in ecology & evolution.

A guide to calculating discrete-time invasion rates from data

H. Caswell, K. Shea, M. Neubert, 2006 .

Rethinking the nature of intraspecific variability and its consequences on species coexistence

G. Maire, R. Pélissier, G. Vieilledent, 2022, bioRxiv.

Beyond neutral science.

J. Clark, 2009, Trends in ecology & evolution.

The missing link: from island extinction to Neutral Theory (a reply to Halley and Iwasa)

J. Clark, 2012 .