Ross C Hardison

发表

Comparative Genomics

Ross C Hardison, R. Hardison, 2003, Lecture Notes in Computer Science.

Computational prediction of cis-regulatory modules from multispecies alignments using Galaxy, Table Browser, and GALA.

Ross C Hardison, Laura Elnitski, David King, 2006, Methods in molecular biology.

S3V2-IDEAS: a package for normalizing, denoising and integrating epigenomic datasets across different cell types

Shaun Mahony, Ross C Hardison, Yu Zhang, 2020, bioRxiv.

Evolution and functional classification of vertebrate gene deserts.

Webb Miller, Ivan Ovcharenko, Ross C Hardison, 2005, Genome research.

Comparative genomics.

Anton Nekrutenko, Webb Miller, Ross C Hardison, 2004, Annual review of genomics and human genetics.

Divergent functions of hematopoietic transcription factors in lineage priming and differentiation during erythro-megakaryopoiesis

Ross C Hardison, Michael A. Beer, Michael A Beer, 2014, Genome research.

ESPERR: learning strong and weak signals in genomic sequence alignments to identify functional elements.

Francesca Chiaromonte, Webb Miller, Ross C Hardison, 2006, Genome research.

zPicture: dynamic alignment and visualization tool for analyzing conservation profiles.

Webb Miller, Ivan Ovcharenko, Ross C Hardison, 2004, Genome research.

GALA, a database for genomic sequence alignments and annotations.

Webb Miller, Izabela Makalowska, Cathy Riemer, 2003, Genome research.

HbVar: A relational database of human hemoglobin variants and thalassemia mutations at the globin gene server

George P Patrinos, Cathy Riemer, Ross C Hardison, 2002, Human mutation.

Patterns of insertions and their covariation with substitutions in the rat, mouse, and human genomes.

David Haussler, Francesca Chiaromonte, Webb Miller, 2004, Genome research.

Lineage and species-specific long noncoding RNAs during erythro-megakaryocytic development.

Ross C Hardison, Vikram R Paralkar, Tejaswini Mishra, 2014, Blood.

HbVar database of human hemoglobin variants and thalassemia mutations: 2007 update

Webb Miller, George P Patrinos, Cathy Riemer, 2007, Human mutation.

Covariation in frequencies of substitution, deletion, transposition, and recombination during eutherian evolution.

David Haussler, Francesca Chiaromonte, Mark Diekhans, 2003, Genome research.

Sharing data between LSDBs and central repositories

Sue Povey, Mauno Vihinen, Johan T den Dunnen, 2009, Human mutation.

Identification of Biologically Relevant Enhancers in Human Erythroid Cells*

Ross C Hardison, Tejaswini Mishra, R. Hardison, 2013, The Journal of Biological Chemistry.

Evaluation of regulatory potential and conservation scores for detecting cis-regulatory modules in aligned mammalian genome sequences.

Francesca Chiaromonte, Webb Miller, Laura Elnitski, 2005, Genome research.

Systematic documentation and analysis of human genetic variation in hemoglobinopathies using the microattribution approach

Philippe Joly, Jan Traeger-Synodinos, Webb Miller, 2011, Nature Genetics.

What fraction of the human genome is functional?

Ross C Hardison, Chris P Ponting, C. Ponting, 2011, Genome research.

Erythroid GATA 1 function revealed by genome-wide analysis of transcription factor occupancy , histone modifications , and mRNA expression

Francesca Chiaromonte, Webb Miller, Ying Zhang, 2009 .

Genome-wide comparative analysis reveals human-mouse regulatory landscape and evolution

Kathryn Beal, Olgert Denas, Ross C Hardison, 2014, BMC Genomics.

Jointly characterizing epigenetic dynamics across multiple human cell types

Yu Zhang, Feng Yue, Ross C Hardison, 2016, Nucleic acids research.

A guide to translation of research results from model organisms to human

Ross C Hardison, 2016, Genome Biology.

Experimental validation of predicted mammalian erythroid cis-regulatory modules.

Francesca Chiaromonte, Webb Miller, Ying Zhang, 2006, Genome research.

Global regulation of erythroid gene expression by transcription factor GATA-1.

Hao Wang, Ross C Hardison, John J Welch, 2004, Blood.

The BET Protein BRD2 Cooperates with CTCF to Enforce Transcriptional and Architectural Boundaries.

Perry Evans, Thomas G. Gilgenast, Jennifer E. Phillips-Cremins, 2017, Molecular cell.

Transcriptional enhancement by GATA1-occupied DNA segments is strongly associated with evolutionary constraint on the binding site motif.

Francesca Chiaromonte, Webb Miller, Ying Zhang, 2008, Genome research.