An Iterative Jackknife Approach for Assessing Reliability and Power of fMRI Group Analyses

For functional magnetic resonance imaging (fMRI) group activation maps, so-called second-level random effect approaches are commonly used, which are intended to be generalizable to the population as a whole. However, reliability of a certain activation focus as a function of group composition or group size cannot directly be deduced from such maps. This question is of particular relevance when examining smaller groups (<20–27 subjects). The approach presented here tries to address this issue by iteratively excluding each subject from a group study and presenting the overlap of the resulting (reduced) second-level maps in a group percent overlap map. This allows to judge where activation is reliable even upon excluding one, two, or three (or more) subjects, thereby also demonstrating the inherent variability that is still present in second-level analyses. Moreover, when progressively decreasing group size, foci of activation will become smaller and/or disappear; hence, the group size at which a given activation disappears can be considered to reflect the power necessary to detect this particular activation. Systematically exploiting this effect allows to rank clusters according to their observable effect size. The approach is tested using different scenarios from a recent fMRI study (children performing a “dual-use” fMRI task, n = 39), and the implications of this approach are discussed.

[1]  Ranjan Maitra,et al.  A re-defined and generalized percent-overlap-of-activation measure for studies of fMRI reproducibility and its use in identifying outlier activation maps , 2010, NeuroImage.

[2]  Jean-Baptiste Poline,et al.  Analysis of a large fMRI cohort: Statistical and methodological issues for group analyses , 2007, NeuroImage.

[3]  B. Biswal,et al.  Use of Jackknife Resampling Techniques to Estimate the Confidence Intervals of fMRI Parameters , 2001, Journal of computer assisted tomography.

[4]  Rajesh Kumar,et al.  A method for removal of global effects from fMRI time series , 2004, NeuroImage.

[5]  Thomas E. Nichols,et al.  Adjusting the effect of nonstationarity in cluster-based and TFCE inference , 2011, NeuroImage.

[6]  John Suckling,et al.  Power calculations for multicenter imaging studies controlled by the false discovery rate , 2010, Human brain mapping.

[7]  V. Schmithorst,et al.  BOLD fMRI signal increases with age in selected brain regions in children , 2004, Neuroreport.

[8]  V. Schmithorst,et al.  Functional Magnetic Resonance Imaging in Pediatrics , 2003, Neuropediatrics.

[9]  Karl J. Friston,et al.  Classical and Bayesian Inference in Neuroimaging: Applications , 2002, NeuroImage.

[10]  R. Dennis Cook,et al.  Detection of Influential Observation in Linear Regression , 2000, Technometrics.

[11]  Paul R. Sackett,et al.  OUTLIER DETECTION AND TREATMENT IN I/O PSYCHOLOGY: A SURVEY OF RESEARCHER BELIEFS AND AN EMPIRICAL ILLUSTRATION , 2006 .

[12]  Karl J. Friston,et al.  Cognitive Conjunction: A New Approach to Brain Activation Experiments , 1997, NeuroImage.

[13]  Jörn Diedrichsen,et al.  Detecting and adjusting for artifacts in fMRI time series data , 2005, NeuroImage.

[14]  Karl J. Friston,et al.  Statistical parametric maps in functional imaging: A general linear approach , 1994 .

[15]  David Hinkley,et al.  Bootstrap Methods: Another Look at the Jackknife , 2008 .

[16]  D. Heisey,et al.  The Abuse of Power , 2001 .

[17]  Kevin Murphy,et al.  An empirical investigation into the number of subjects required for an event-related fMRI study , 2004, NeuroImage.

[18]  K. Heilman,et al.  Functional imaging: heterogeneity in task strategy and functional anatomy and the case for individual analysis. , 1998, Neuropsychiatry, neuropsychology, and behavioral neurology.

[19]  Karl J. Friston,et al.  Variability in fMRI: An Examination of Intersession Differences , 2000, NeuroImage.

[20]  E. Bullmore,et al.  Permutation tests for factorially designed neuroimaging experiments , 2004, Human brain mapping.

[21]  W H Theodore,et al.  Limitations to plasticity of language network reorganization in localization related epilepsy. , 2008, Brain : a journal of neurology.

[22]  Karl J. Friston,et al.  Unified segmentation , 2005, NeuroImage.

[23]  Victoria J. Hodge,et al.  A Survey of Outlier Detection Methodologies , 2004, Artificial Intelligence Review.

[24]  R. C. Oldfield The assessment and analysis of handedness: the Edinburgh inventory. , 1971, Neuropsychologia.

[25]  Wolfgang Grodd,et al.  Clinical functional MRI of the language domain in children with epilepsy , 2011, Human brain mapping.

[26]  Ian Marshall,et al.  Functional Magnetic Resonance Imaging (fMRI) reproducibility and variance components across visits and scanning sites with a finger tapping task , 2010, NeuroImage.

[27]  Thomas E. Nichols,et al.  Controlling the familywise error rate in functional neuroimaging: a comparative review , 2003, Statistical methods in medical research.

[28]  Karl J. Friston,et al.  Modelling Geometric Deformations in Epi Time Series , 2022 .

[29]  Jesper Andersson,et al.  Valid conjunction inference with the minimum statistic , 2005, NeuroImage.

[30]  Benjamin J. Tamber-Rosenau,et al.  Avoiding non-independence in fMRI data analysis: Leave one subject out , 2010, NeuroImage.

[31]  Nicole A Lazar,et al.  Assessing the sensitivity of fMRI group maps , 2004, NeuroImage.

[32]  Scott Holland,et al.  Template-O-Matic: A toolbox for creating customized pediatric templates , 2008, NeuroImage.

[33]  Mark W. Woolrich,et al.  Robust group analysis using outlier inference , 2008, NeuroImage.

[34]  Thomas E. Nichols,et al.  Power calculation for group fMRI studies accounting for arbitrary design and temporal autocorrelation , 2008, NeuroImage.

[35]  Jean-Baptiste Poline,et al.  Group analysis in functional neuroimaging: selecting subjects using similarity measures , 2003, NeuroImage.

[36]  Karl J. Friston,et al.  How Many Subjects Constitute a Study? , 1999, NeuroImage.

[37]  Jos B. T. M. Roerdink,et al.  Denoising functional MR images: a comparison of wavelet denoising and Gaussian smoothing , 2004, IEEE Transactions on Medical Imaging.

[38]  Thomas E. Nichols,et al.  Nonparametric permutation tests for functional neuroimaging: A primer with examples , 2002, Human brain mapping.

[39]  G. Glass Primary, Secondary, and Meta-Analysis of Research1 , 1976 .

[40]  Gary H Glover,et al.  Estimating sample size in functional MRI (fMRI) neuroimaging studies: Statistical power analyses , 2002, Journal of Neuroscience Methods.

[41]  Nancy L. Leech,et al.  Post-Hoc Power: A Concept Whose Time Has Come. , 2004 .

[42]  Steven Roberts,et al.  DELETE‐2 AND DELETE‐3 JACKKNIFE PROCEDURES FOR UNMASKING IN REGRESSION , 2010 .

[43]  Scott K. Holland,et al.  Sex differences in the activation of language cortex during childhood , 2006, Neuropsychologia.

[44]  E. Zarahn,et al.  A Reference Effect Approach for Power Analysis in fMRI , 2001, NeuroImage.

[45]  N Jon Shah,et al.  Assessment of reliability in functional imaging studies , 2003, Journal of magnetic resonance imaging : JMRI.

[46]  Thomas E. Nichols,et al.  Thresholding of Statistical Maps in Functional Neuroimaging Using the False Discovery Rate , 2002, NeuroImage.

[47]  Karl J. Friston,et al.  Detecting subject-specific activations using fuzzy clustering , 2007, NeuroImage.

[48]  Hanna Damasio,et al.  Evaluation of voxel-based morphometry for focal lesion detection in individuals , 2003, NeuroImage.

[49]  Thomas E. Nichols,et al.  Diagnosis and exploration of massively univariate neuroimaging models , 2003, NeuroImage.

[50]  Ron Kikinis,et al.  Statistical validation of image segmentation quality based on a spatial overlap index. , 2004, Academic radiology.

[51]  Marko Wilke,et al.  Assessing language and visuospatial functions with one task: A “dual use” approach to performing fMRI in children , 2011, NeuroImage.

[52]  Arthur W. Toga,et al.  The myth of the normal, average human brain—The ICBM experience: (1) Subject screening and eligibility , 2009, NeuroImage.

[53]  R. Buxton,et al.  Detection Power, Estimation Efficiency, and Predictability in Event-Related fMRI , 2001, NeuroImage.

[54]  Nikos K Logothetis,et al.  On the nature of the BOLD fMRI contrast mechanism. , 2004, Magnetic resonance imaging.

[55]  Rafael Malach,et al.  Conjunction group analysis: An alternative to mixed/random effect analysis , 2007, NeuroImage.

[56]  D. Sackett Bias in analytic research. , 1979, Journal of chronic diseases.