Analysis of reactive search optimisation techniques for the maximum clique problem and applications
暂无分享,去创建一个
[1] J. Jeffry Howbert,et al. The Maximum Clique Problem , 2007 .
[2] Thorsten Joachims,et al. Supervised clustering with support vector machines , 2005, ICML.
[3] Gail J. Bartlett,et al. Analysis of catalytic residues in enzyme active sites. , 2002, Journal of molecular biology.
[4] Mauro Brunato,et al. Predicting Structural and Functional Sites in Proteins by Searching for Maximum-weight Cliques , 2010, AAAI.
[5] Andrew Lumsdaine,et al. A Component Architecture for LAM/MPI , 2003, PVM/MPI.
[6] Mauro Brunato,et al. Cooperating local search for the maximum clique problem , 2011, J. Heuristics.
[7] Pierre Hansen,et al. Variable neighborhood search for the maximum clique , 2001, Discret. Appl. Math..
[8] Mario Köppen,et al. Visualization of Pareto-Sets in Evolutionary Multi-Objective Optimization , 2007, 7th International Conference on Hybrid Intelligent Systems (HIS 2007).
[9] Ayellet Tal,et al. Online Dynamic Graph Drawing , 2008, IEEE Transactions on Visualization and Computer Graphics.
[10] Steven Halim,et al. Designing and Tuning SLS Through Animation and Graphics: An Extended Walk-Through , 2007, SLS.
[11] Wayne J. Pullan,et al. Dynamic Local Search for the Maximum Clique Problem , 2011, J. Artif. Intell. Res..
[12] Roberto Battiti,et al. Reactive and dynamic local search for max-clique: Engineering effective building blocks , 2010, Comput. Oper. Res..
[13] Hartmut Pohlheim,et al. Visualization of evolutionary algorithms - set of standard techniques and multidimensional visualization , 1999 .
[14] Ken Perlin,et al. Human-guided simple search: combining information visualization and heuristic search , 1999, NPIVM '99.
[15] Dennis R. Livesay,et al. How accurate and statistically robust are catalytic site predictions based on closeness centrality? , 2007, BMC Bioinformatics.
[17] Mauro Brunato,et al. On Effectively Finding Maximal Quasi-cliques in Graphs , 2008, LION.
[18] Roberto Battiti,et al. Greedy, Prohibition, and Reactive Heuristics for Graph Partitioning , 1999, IEEE Trans. Computers.
[19] Ying Wei,et al. Partial Order Optimum Likelihood (POOL): Maximum Likelihood Prediction of Protein Active Site Residues Using 3D Structure and Sequence Properties , 2009, PLoS Comput. Biol..
[20] V. Sobolev,et al. Prediction of transition metal‐binding sites from apo protein structures , 2007, Proteins.
[21] Stephen A. Cook,et al. The complexity of theorem-proving procedures , 1971, STOC.
[22] Albert,et al. Emergence of scaling in random networks , 1999, Science.
[23] Jessica C. Ebert,et al. Robust recognition of zinc binding sites in proteins , 2007, Protein science : a publication of the Protein Society.
[24] Kengo Katayama,et al. Solving the maximum clique problem by k-opt local search , 2004, SAC '04.
[25] Christine Solnon,et al. A study of ACO capabilities for solving the maximum clique problem , 2006, J. Heuristics.
[26] Richard M. Karp,et al. Reducibility Among Combinatorial Problems , 1972, 50 Years of Integer Programming.
[27] Pavel A. Pevzner,et al. Combinatorial Approaches to Finding Subtle Signals in DNA Sequences , 2000, ISMB.
[28] Wayne J. Pullan,et al. Phased local search for the maximum clique problem , 2006, J. Comb. Optim..
[29] B. Rost,et al. Identifying cysteines and histidines in transition‐metal‐binding sites using support vector machines and neural networks , 2006, Proteins.
[31] Paolo Frasconi,et al. MetalDetector v2.0: predicting the geometry of metal binding sites from protein sequence , 2011, Nucleic Acids Res..
[32] Egon Balas,et al. Finding a Maximum Clique in an Arbitrary Graph , 1986, SIAM J. Comput..
[33] Raymond J. Mooney,et al. Semi-supervised clustering: probabilistic models, algorithms and experiments , 2005 .
[34] Roberto Battiti,et al. Reactive Local Search for the Maximum Clique Problem1 , 2001, Algorithmica.
[35] Federico Della Croce,et al. Combining Swaps and Node Weights in an Adaptive Greedy Approach for the Maximum Clique Problem , 2004, J. Heuristics.
[36] Mauro Brunato,et al. Techniques and Tools for Local Search Landscape Visualization and Analysis , 2009, SLS.
[37] Wilbert E. Wilhelm,et al. Clique-detection models in computational biochemistry and genomics , 2006, Eur. J. Oper. Res..
[38] Peter Eades,et al. A Heuristic for Graph Drawing , 1984 .
[39] Andrea Passerini,et al. Automatic prediction of catalytic residues by modeling residue structural neighborhood , 2010, BMC Bioinformatics.
[40] Elena Marchiori,et al. Genetic, Iterated and Multistart Local Search for the Maximum Clique Problem , 2002, EvoWorkshops.
[41] Roberto Battiti,et al. The Reactive Tabu Search , 1994, INFORMS J. Comput..
[42] Xing Xu,et al. A graph theoretical approach for predicting common RNA secondary structure motifs including pseudoknots in unaligned sequences , 2004, Bioinform..
[43] Greg Burns,et al. LAM: An Open Cluster Environment for MPI , 2002 .
[44] Ulrik Brandes,et al. Efficient generation of large random networks. , 2005, Physical review. E, Statistical, nonlinear, and soft matter physics.
[45] Éric D. Taillard,et al. Robust taboo search for the quadratic assignment problem , 1991, Parallel Comput..
[46] Janet M. Thornton,et al. The Catalytic Site Atlas: a resource of catalytic sites and residues identified in enzymes using structural data , 2004, Nucleic Acids Res..
[47] J. Håstad. Clique is hard to approximate withinn1−ε , 1999 .
[48] Mauro Brunato,et al. Cooperative Strategies and Reactive Search: A Hybrid Model Proposal , 2009, LION.
[49] Joseph C. Culberson,et al. Camouflaging independent sets in quasi-random graphs , 1993, Cliques, Coloring, and Satisfiability.
[50] Stephen Curial,et al. Effectively visualizing large networks through sampling , 2005, VIS 05. IEEE Visualization, 2005..
[51] Nanjiang Shu,et al. BIOINFORMATICS ORIGINAL PAPER doi:10.1093/bioinformatics/btm618 Sequence analysis Prediction of zinc-binding sites in proteins from sequence , 2008 .
[52] Graham Kendall,et al. Hyper-Heuristics: An Emerging Direction in Modern Search Technology , 2003, Handbook of Metaheuristics.