Predicting standard-dose PET image from low-dose PET and multimodal MR images using mapping-based sparse representation

Positron emission tomography (PET) has been widely used in clinical diagnosis for diseases and disorders. To obtain high-quality PET images requires a standard-dose radionuclide (tracer) injection into the human body, which inevitably increases risk of radiation exposure. One possible solution to this problem is to predict the standard-dose PET image from its low-dose counterpart and its corresponding multimodal magnetic resonance (MR) images. Inspired by the success of patch-based sparse representation (SR) in super-resolution image reconstruction, we propose a mapping-based SR (m-SR) framework for standard-dose PET image prediction. Compared with the conventional patch-based SR, our method uses a mapping strategy to ensure that the sparse coefficients, estimated from the multimodal MR images and low-dose PET image, can be applied directly to the prediction of standard-dose PET image. As the mapping between multimodal MR images (or low-dose PET image) and standard-dose PET images can be particularly complex, one step of mapping is often insufficient. To this end, an incremental refinement framework is therefore proposed. Specifically, the predicted standard-dose PET image is further mapped to the target standard-dose PET image, and then the SR is performed again to predict a new standard-dose PET image. This procedure can be repeated for prediction refinement of the iterations. Also, a patch selection based dictionary construction method is further used to speed up the prediction process. The proposed method is validated on a human brain dataset. The experimental results show that our method can outperform benchmark methods in both qualitative and quantitative measures.

[1]  Allen Y. Yang,et al.  Robust Face Recognition via Sparse Representation , 2009, IEEE Transactions on Pattern Analysis and Machine Intelligence.

[2]  Daoqiang Zhang,et al.  Constrained Sparse Functional Connectivity Networks for MCI Classification , 2012, MICCAI.

[3]  Harald H. Quick,et al.  Radiotracer Dose Reduction in Integrated PET/MR: Implications from National Electrical Manufacturers Association Phantom Studies , 2014, The Journal of Nuclear Medicine.

[4]  Anthonin Reilhac,et al.  Characterisation of partial volume effect and region-based correction in small animal positron emission tomography (PET) of the rat brain , 2012, NeuroImage.

[5]  Leif Østergaard,et al.  How Reliable Is Perfusion MR in Acute Stroke?: Validation and Determination of the Penumbra Threshold Against Quantitative PET , 2008, Stroke.

[6]  R. M. Farouk,et al.  Image Denoising based on Sparse Representation and Non-Negative Matrix Factorization , 2012 .

[7]  B. Lumbreras,et al.  Incidental findings in imaging diagnostic tests: a systematic review. , 2010, The British journal of radiology.

[8]  Jian Yang,et al.  A novel sparse representation based framework for face image super-resolution , 2014, Neurocomputing.

[9]  Matthias Hofmann,et al.  Hybrid PET/MRI of Intracranial Masses: Initial Experiences and Comparison to PET/CT , 2010, The Journal of Nuclear Medicine.

[10]  Hossein Mobahi,et al.  Toward a Practical Face Recognition System: Robust Alignment and Illumination by Sparse Representation , 2012, IEEE Transactions on Pattern Analysis and Machine Intelligence.

[11]  Wei Chen Clinical Applications of PET in Brain Tumors* , 2007, Journal of Nuclear Medicine.

[12]  H. Malcolm Hudson,et al.  Accelerated image reconstruction using ordered subsets of projection data , 1994, IEEE Trans. Medical Imaging.

[13]  Jin Wang,et al.  An Optimal Decisional Space for the Classification of Alzheimer's Disease and Mild Cognitive Impairment , 2014, IEEE Transactions on Biomedical Engineering.

[14]  Dinggang Shen,et al.  journal homepage: www.elsevier.com/locate/ynimg , 2022 .

[15]  Daniel Rueckert,et al.  Registration Using Sparse Free-Form Deformations , 2012, MICCAI.

[16]  David Zhang,et al.  Texture classification via patch-based sparse texton learning , 2010, 2010 IEEE International Conference on Image Processing.

[17]  Lei Zhang,et al.  Image Deblurring and Super-Resolution by Adaptive Sparse Domain Selection and Adaptive Regularization , 2010, IEEE Transactions on Image Processing.

[18]  Yiyan Liu,et al.  Physiology and pathophysiology of incidental findings detected on FDG-PET scintigraphy. , 2010, Seminars in nuclear medicine.

[19]  Jacques-Donald Tournier,et al.  Diffusion tensor imaging and beyond , 2011, Magnetic resonance in medicine.

[20]  Guillermo Sapiro,et al.  Sparse Representation for Computer Vision and Pattern Recognition , 2010, Proceedings of the IEEE.

[21]  Tom Vercauteren,et al.  Diffeomorphic demons: Efficient non-parametric image registration , 2009, NeuroImage.

[22]  H. Zou,et al.  Regularization and variable selection via the elastic net , 2005 .

[23]  YangJian,et al.  A novel sparse representation based framework for face image super-resolution , 2014 .

[24]  A. G. Osborn,et al.  How Reliable Is Perfusion MR in Acute Stroke? Validation and Determination of the Penumbra Threshold Against Quantitative PET , 2008 .

[25]  Liang-Tien Chia,et al.  Kernel Sparse Representation for Image Classification and Face Recognition , 2010, ECCV.

[26]  Ying Zhang,et al.  Infrared image denoising via sparse representation over redundant dictionary , 2012, 2012 5th International Congress on Image and Signal Processing.

[27]  Mark W. Woolrich,et al.  Advances in functional and structural MR image analysis and implementation as FSL , 2004, NeuroImage.

[28]  Shigeaki Higashiyama,et al.  Diagnostic Accuracy of 11C-Methionine PET for Differentiation of Recurrent Brain Tumors from Radiation Necrosis After Radiotherapy , 2008, Journal of Nuclear Medicine.

[29]  Claus Svarer,et al.  Attenuation Correction for the HRRT PET-Scanner Using Transmission Scatter Correction and Total Variation Regularization , 2013, IEEE Transactions on Medical Imaging.

[30]  R. Leahy,et al.  Magnetic resonance-guided positron emission tomography image reconstruction. , 2013, Seminars in nuclear medicine.

[31]  Michael Brady,et al.  Motion Correction and Attenuation Correction for Respiratory Gated PET Images , 2011, IEEE Transactions on Medical Imaging.

[32]  J. O'Brien,et al.  PET imaging of brain amyloid in dementia: a review , 2011, International journal of geriatric psychiatry.

[33]  Torsten Rohlfing,et al.  Evaluation of atlas selection strategies for atlas-based image segmentation with application to confocal microscopy images of bee brains , 2004, NeuroImage.

[34]  Heinz-Peter Schlemmer,et al.  PET/MRI: Paving the Way for the Next Generation of Clinical Multimodality Imaging Applications , 2010, Journal of Nuclear Medicine.

[35]  Dimitris N. Metaxas,et al.  Deformable segmentation via sparse representation and dictionary learning , 2012, Medical Image Anal..

[36]  Lei Zhang,et al.  Super-resolution with nonlocal regularized sparse representation , 2010, Visual Communications and Image Processing.

[37]  S. Matthews,et al.  Incidental findings on positron emission tomography/CT scans performed in the investigation of lung cancer. , 2012, The British journal of radiology.

[38]  Thomas S. Huang,et al.  Image Super-Resolution Via Sparse Representation , 2010, IEEE Transactions on Image Processing.

[39]  Xiaoyi Jiang,et al.  Motion Correction in Dual Gated Cardiac PET Using Mass-Preserving Image Registration , 2012, IEEE Transactions on Medical Imaging.

[40]  Thomas S. Huang,et al.  Efficient sparse representation based image super resolution via dual dictionary learning , 2011, 2011 IEEE International Conference on Multimedia and Expo.

[41]  H. Zaidi,et al.  Design and performance evaluation of a whole-body Ingenuity TF PET–MRI system , 2011, Physics in medicine and biology.

[42]  Lei Zhang,et al.  Low-Dose X-ray CT Reconstruction via Dictionary Learning , 2012, IEEE Transactions on Medical Imaging.

[43]  Christopher Coello,et al.  Correction of partial volume effect in 18F-FDG PET brain studies using coregistered MR volumes: Voxel based analysis of tracer uptake in the white matter , 2013, NeuroImage.

[44]  Ian Law,et al.  Combined PET/MR imaging in neurology: MR-based attenuation correction implies a strong spatial bias when ignoring bone , 2014, NeuroImage.

[45]  Rasmus R. Paulsen,et al.  List-Mode PET Motion Correction Using Markerless Head Tracking: Proof-of-Concept With Scans of Human Subject , 2013, IEEE Transactions on Medical Imaging.

[46]  C. DeCarli,et al.  FDG-PET improves accuracy in distinguishing frontotemporal dementia and Alzheimer's disease. , 2007, Brain : a journal of neurology.

[47]  Michael Elad,et al.  Applications of Sparse Representation and Compressive Sensing , 2010, Proc. IEEE.

[48]  Julie R. Gralow,et al.  PET tumor metabolism in locally advanced breast cancer patients: Predicting outcome after neoadjuvant chemotherapy by kinetic analysis of FDG PET , 2009 .