Automated 3D mapping of hippocampal atrophy and its clinical correlates in 400 subjects with Alzheimer's disease, mild cognitive impairment, and elderly controls

We used a new method we developed for automated hippocampal segmentation, called the auto context model, to analyze brain MRI scans of 400 subjects from the Alzheimer's disease neuroimaging initiative. After training the classifier on 21 hand‐labeled expert segmentations, we created binary maps of the hippocampus for three age‐ and sex‐matched groups: 100 subjects with Alzheimer's disease (AD), 200 with mild cognitive impairment (MCI) and 100 elderly controls (mean age: 75.84; SD: 6.64). Hippocampal traces were converted to parametric surface meshes and a radial atrophy mapping technique was used to compute average surface models and local statistics of atrophy. Surface‐based statistical maps visualized links between regional atrophy and diagnosis (MCI versus controls: P = 0.008; MCI versus AD: P = 0.001), mini‐mental state exam (MMSE) scores, and global and sum‐of‐boxes clinical dementia rating scores (CDR; all P < 0.0001, corrected). Right but not left hippocampal atrophy was associated with geriatric depression scores (P = 0.004, corrected); hippocampal atrophy was not associated with subsequent decline in MMSE and CDR scores, educational level, ApoE genotype, systolic or diastolic blood pressure measures, or homocysteine. We gradually reduced sample sizes and used false discovery rate curves to examine the method's power to detect associations with diagnosis and cognition in smaller samples. Forty subjects were sufficient to discriminate AD from normal and correlate atrophy with CDR scores; 104, 200, and 304 subjects, respectively, were required to correlate MMSE with atrophy, to distinguish MCI from normal, and MCI from AD. Hum Brain Mapp 2009. © 2009 Wiley‐Liss, Inc.

[1]  M. Folstein,et al.  Clinical diagnosis of Alzheimer's disease: Report of the NINCDS—ADRDA Work Group under the auspices of Department of Health and Human Services Task Force on Alzheimer's Disease , 2011, Neurology.

[2]  Meredith N. Braskie,et al.  Vascular health risks and fMRI activation during a memory task in older adults , 2010, Neurobiology of Aging.

[3]  Guillermo Sapiro,et al.  Measurement of cortical thickness from MRI by minimum line integrals on soft‐classified tissue , 2009, Human brain mapping.

[4]  Norbert Schuff,et al.  Automated mapping of hippocampal atrophy in 1-year repeat MRI data from 490 subjects with Alzheimer's disease, mild cognitive impairment, and elderly controls , 2009, NeuroImage.

[5]  J. Morris,et al.  Differential effects of aging and Alzheimer's disease on medial temporal lobe cortical thickness and surface area , 2009, Neurobiology of Aging.

[6]  Michael Weiner,et al.  and the Alzheimer’s Disease Neuroimaging Initiative* , 2007 .

[7]  Liana G. Apostolova,et al.  Automatic Subcortical Segmentation Using a Contextual Model , 2008, MICCAI.

[8]  Paul M. Thompson,et al.  Reduced cortical thickness in hippocampal subregions among cognitively normal apolipoprotein E e4 carriers , 2008, NeuroImage.

[9]  Paul M. Thompson,et al.  Hippocampal shape differences in dementia with Lewy bodies , 2008, NeuroImage.

[10]  C. Jack,et al.  P1-311: Use of the support vector machine and sensitivity of an Alzheimer's disease-related region-of-interest gray matter classifier in identifying amnestic mild cognitive impairment subjects who convert to Alzheimer's disease: Preliminary findings from the Alzheimer's disease neuroimaging initiati , 2008, Alzheimer's & Dementia.

[11]  Norbert Schuff,et al.  3D characterization of brain atrophy in Alzheimer's disease and mild cognitive impairment using tensor-based morphometry , 2008, NeuroImage.

[12]  Norbert Schuff,et al.  Mapping hippocampal degeneration in 400 subjects with a novel automated segmentation approach , 2008, 2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro.

[13]  Paul M. Thompson,et al.  Age effects on hippocampal structural changes in old men: The HAAS , 2008, NeuroImage.

[14]  Nick C Fox,et al.  The Alzheimer's disease neuroimaging initiative (ADNI): MRI methods , 2008, Journal of magnetic resonance imaging : JMRI.

[15]  Paul M. Thompson,et al.  Automated Ventricular Mapping with Multi-atlas Fluid Image Alignment Reveals Genetic Effects in Alzheimer's Disease , 2007 .

[16]  Paul M. Thompson,et al.  Segmentation-free measurement of cortical thickness from MRI , 2008, 2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro.

[17]  C. Jack,et al.  MRI patterns of atrophy associated with progression to AD in amnestic mild cognitive impairment , 2008, Neurology.

[18]  Liberty S. Hamilton,et al.  Hippocampal morphology and distinguishing late-onset from early-onset elderly depression. , 2008, The American journal of psychiatry.

[19]  Paul M. Thompson,et al.  Intensity non-uniformity correction using N3 on 3-T scanners with multichannel phased array coils , 2008, NeuroImage.

[20]  Alan C. Evans,et al.  Automated cortical thickness measurements from MRI can accurately separate Alzheimer's patients from normal elderly controls , 2008, Neurobiology of Aging.

[21]  Stephanie Powell,et al.  Registration and machine learning-based automated segmentation of subcortical and cerebellar brain structures , 2008, NeuroImage.

[22]  P. Thompson,et al.  Computational anatomical methods as applied to ageing and dementia. , 2007, The British journal of radiology.

[23]  Paul M. Thompson,et al.  Mean Template for Tensor-Based Morphometry Using Deformation Tensors , 2007, MICCAI.

[24]  Paul M. Thompson,et al.  Direct mapping of hippocampal surfaces with intrinsic shape context , 2007, NeuroImage.

[25]  Guido Gerig,et al.  Population-Based Fitting of Medial Shape Models with Correspondence Optimization , 2007, IPMI.

[26]  Hongtu Zhu,et al.  A Statistical Analysis of Brain Morphology Using Wild Bootstrapping , 2007, IEEE Transactions on Medical Imaging.

[27]  P. Thompson,et al.  Brain mapping as a tool to study neurodegeneration , 2007, Neurotherapeutics.

[28]  Kiralee M. Hayashi,et al.  Structural Correlates of Apathy in Alzheimer’s Disease , 2007, Dementia and Geriatric Cognitive Disorders.

[29]  Deanna Greenstein,et al.  Cortical morphology in children and adolescents with different apolipoprotein E gene polymorphisms: an observational study , 2007, The Lancet Neurology.

[30]  Paul M. Thompson,et al.  Hippocampal shape analysis in Alzheimer’s disease: A population-based study , 2007, NeuroImage.

[31]  Michael I. Miller,et al.  Large Deformation Diffeomorphism and Momentum Based Hippocampal Shape Discrimination in Dementia of the Alzheimer type , 2007, IEEE Transactions on Medical Imaging.

[32]  Amy J. Jak,et al.  Differential Cross-Sectional and Longitudinal Impact of APOE Genotype on Hippocampal Volumes in Nondemented Older Adults , 2007, Dementia and Geriatric Cognitive Disorders.

[33]  R. Mayeux,et al.  Hippocampal and entorhinal atrophy in mild cognitive impairment , 2007, Neurology.

[34]  Nick C. Fox,et al.  Improved reliability of hippocampal atrophy rate measurement in mild cognitive impairment using fluid registration , 2007, NeuroImage.

[35]  Paul M. Thompson,et al.  3 D pattern of brain atrophy in HIV / AIDS visualized using tensor-based morphometry , 2006 .

[36]  Lukas Scheef,et al.  Volume reduction of the entorhinal cortex in subjective memory impairment , 2006, Neurobiology of Aging.

[37]  Ivo D Dinov,et al.  3D comparison of hippocampal atrophy in amnestic mild cognitive impairment and Alzheimer's disease. , 2006, Brain : a journal of neurology.

[38]  Nick C Fox,et al.  Tracking atrophy progression in familial Alzheimer's disease: a serial MRI study , 2006, The Lancet Neurology.

[39]  Paul M. Thompson,et al.  In vivo neuropathology of the hippocampal formation in AD: A radial mapping MR-based study , 2006, NeuroImage.

[40]  Guido Gerig,et al.  User-guided 3D active contour segmentation of anatomical structures: Significantly improved efficiency and reliability , 2006, NeuroImage.

[41]  Norbert Schuff,et al.  Longitudinal stability of MRI for mapping brain change using tensor-based morphometry , 2006, NeuroImage.

[42]  Tianzi Jiang,et al.  Changes in hippocampal connectivity in the early stages of Alzheimer's disease: Evidence from resting state fMRI , 2006, NeuroImage.

[43]  Colin Studholme,et al.  Deformation-based mapping of volume change from serial brain MRI in the presence of local tissue contrast change , 2006, IEEE Transactions on Medical Imaging.

[44]  Kiralee M. Hayashi,et al.  Conversion of mild cognitive impairment to Alzheimer disease predicted by hippocampal atrophy maps. , 2006, Archives of neurology.

[45]  Anders M. Dale,et al.  Reliability in multi-site structural MRI studies: Effects of gradient non-linearity correction on phantom and human data , 2006, NeuroImage.

[46]  Michael A Rapp,et al.  Increased hippocampal plaques and tangles in patients with Alzheimer disease with a lifetime history of major depression. , 2006, Archives of general psychiatry.

[47]  C. Jack,et al.  Alzheimer's Disease Neuroimaging Initiative , 2008 .

[48]  A W Toga,et al.  Three-dimensional preoperative maps of hippocampal atrophy predict surgical outcomes in temporal lobe epilepsy , 2005, Neurology.

[49]  Brigitte Landeau,et al.  Using voxel-based morphometry to map the structural changes associated with rapid conversion in MCI: A longitudinal MRI study , 2005, NeuroImage.

[50]  Joan Alexis Glaunès,et al.  Surface Matching via Currents , 2005, IPMI.

[51]  C. Jack,et al.  Ways toward an early diagnosis in Alzheimer’s disease: The Alzheimer’s Disease Neuroimaging Initiative (ADNI) , 2005, Alzheimer's & Dementia.

[52]  Warren D Taylor,et al.  Influence of serotonin transporter promoter region polymorphisms on hippocampal volumes in late-life depression. , 2005, Archives of general psychiatry.

[53]  Douglas W. Jones,et al.  Morphometric analysis of lateral ventricles in schizophrenia and healthy controls regarding genetic and disease-specific factors. , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[54]  Philip B. Ward,et al.  Reduced hippocampal volumes and memory loss in patients with early- and late-onset depression , 2005, British Journal of Psychiatry.

[55]  J. Bremner,et al.  MR-based in vivo hippocampal volumetrics: 2. Findings in neuropsychiatric disorders , 2005, Molecular Psychiatry.

[56]  M. Miller,et al.  Computational anatomy and neuropsychiatric disease: probabilistic assessment of variation and statistical inference of group difference, hemispheric asymmetry, and time-dependent change , 2004, NeuroImage.

[57]  Anil Gholkar,et al.  A longitudinal study of hippocampal volume, cortisol levels, and cognition in older depressed subjects. , 2004, The American journal of psychiatry.

[58]  Nick C. Fox,et al.  Differentiating AD from aging using semiautomated measurement of hippocampal atrophy rates , 2004, NeuroImage.

[59]  Paul M. Thompson,et al.  Mapping hippocampal and ventricular change in Alzheimer disease , 2004, NeuroImage.

[60]  A. Dale,et al.  Thinning of the cerebral cortex in aging. , 2004, Cerebral cortex.

[61]  Paul M. Thompson,et al.  Structural Abnormalities in the Brains of Human Subjects Who Use Methamphetamine , 2004, The Journal of Neuroscience.

[62]  Robert Barber,et al.  Hippocampal volume change in depression: Late- and early-onset illness compared , 2004, British Journal of Psychiatry.

[63]  Norbert Schuff,et al.  Deformation tensor morphometry of semantic dementia with quantitative validation , 2004, NeuroImage.

[64]  H. Soininen,et al.  Hippocampus and entorhinal cortex in mild cognitive impairment and early AD , 2004, Neurobiology of Aging.

[65]  Arthur W Toga,et al.  Mapping brain size and cortical gray matter changes in elderly depression , 2003, Biological Psychiatry.

[66]  Michael I. Miller,et al.  Changes in hippocampal volume and shape across time distinguish dementia of the Alzheimer type from healthy aging☆ , 2003, NeuroImage.

[67]  W. M. van der Flier,et al.  Volumetric MRI predicts rate of cognitive decline related to AD and cerebrovascular disease , 2003, Neurology.

[68]  Clifford R Jack,et al.  Neuroimaging in Alzheimer disease: an evidence-based review. , 2003, Neuroimaging clinics of North America.

[69]  Kiralee M. Hayashi,et al.  Dynamics of Gray Matter Loss in Alzheimer's Disease , 2003, The Journal of Neuroscience.

[70]  C. Jack,et al.  MRI as a biomarker of disease progression in a therapeutic trial of milameline for AD , 2003, Neurology.

[71]  Theo G. M. van Erp,et al.  A Twin Study of Genetic Contributions to Hippocampal Morphology in Schizophrenia , 2002, Neurobiology of Disease.

[72]  Karl J. Friston,et al.  Automatic Differentiation of Anatomical Patterns in the Human Brain: Validation with Studies of Degenerative Dementias , 2002, NeuroImage.

[73]  James T Becker,et al.  Brain morphometric abnormalities in geriatric depression: long-term neurobiological effects of illness duration. , 2002, The American journal of psychiatry.

[74]  John D. Storey A direct approach to false discovery rates , 2002 .

[75]  A. Toga,et al.  Hippocampal Atrophy in Persons With Age-Associated Memory Impairment: Volumetry Within a Common Space , 2002, Psychosomatic medicine.

[76]  Thomas E. Nichols,et al.  Thresholding of Statistical Maps in Functional Neuroimaging Using the False Discovery Rate , 2002, NeuroImage.

[77]  A. Dale,et al.  Whole Brain Segmentation Automated Labeling of Neuroanatomical Structures in the Human Brain , 2002, Neuron.

[78]  Thomas E. Nichols,et al.  Nonparametric permutation tests for functional neuroimaging: A primer with examples , 2002, Human brain mapping.

[79]  J. Morris,et al.  Current concepts in mild cognitive impairment. , 2001, Archives of neurology.

[80]  N. Schuff,et al.  Magnetic resonance imaging of the entorhinal cortex and hippocampus in mild cognitive impairment and Alzheimer's disease , 2001, Journal of neurology, neurosurgery, and psychiatry.

[81]  J Mazziotta,et al.  A probabilistic atlas and reference system for the human brain: International Consortium for Brain Mapping (ICBM). , 2001, Philosophical transactions of the Royal Society of London. Series B, Biological sciences.

[82]  Karl J. Friston,et al.  A Voxel-Based Morphometric Study of Ageing in 465 Normal Adult Human Brains , 2001, NeuroImage.

[83]  Nick C. Fox,et al.  Automated Hippocampal Segmentation by Regional Fluid Registration of Serial MRI: Validation and Application in Alzheimer's Disease , 2001, NeuroImage.

[84]  R. Petersen,et al.  Aging, mild cognitive impairment, and Alzheimer's disease. , 2000, Neurologic clinics.

[85]  H. Adams,et al.  Progressive cerebral atrophy in MS: A serial study using registered, volumetric MRI , 2000, Neurology.

[86]  James R MacFall,et al.  Hippocampal volume in geriatric depression , 2000, Biological Psychiatry.

[87]  S. Joshi,et al.  Mesial temporal sclerosis and temporal lobe epilepsy: MR imaging deformation-based segmentation of the hippocampus in five patients. , 2000, Radiology.

[88]  D. Bennett,et al.  From Healthy Aging to Early Alzheimer's Disease: In Vivo Detection of Entorhinal Cortex Atrophy , 2000, Annals of the New York Academy of Sciences.

[89]  G. Frisoni,et al.  Hippocampus and entorhinal cortex in frontotemporal dementia and Alzheimer’s disease: a morphometric MRI study , 2000, Biological Psychiatry.

[90]  Hilkka Soininen,et al.  Hippocampus in Alzheimer’s disease: a 3-year follow-up MRI study , 2000, Biological Psychiatry.

[91]  Martin Styner,et al.  Parametric estimate of intensity inhomogeneities applied to MRI , 2000, IEEE Transactions on Medical Imaging.

[92]  R. Sulkava,et al.  APOE ε4 does not predict mortality, cognitive decline, or dementia in the oldest old , 2000, Neurology.

[93]  Charles Ramassamy,et al.  Apolipoprotein E and β-amyloid levels in the hippocampus and frontal cortex of Alzheimer's disease subjects are disease-related and apolipoprotein E genotype dependent , 1999, Brain Research.

[94]  L. Kurlowicz,et al.  The Mini Mental State Examination (MMSE). , 1999, Director.

[95]  C. Jack,et al.  Prediction of AD with MRI-based hippocampal volume in mild cognitive impairment , 1999, Neurology.

[96]  E. Tangalos,et al.  Mild Cognitive Impairment Clinical Characterization and Outcome , 1999 .

[97]  G. Frisoni,et al.  Hippocampal and entorhinal cortex atrophy in frontotemporal dementia and Alzheimer’s disease , 1999, Neurology.

[98]  U. Grenander,et al.  Hippocampal morphometry in schizophrenia by high dimensional brain mapping. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[99]  Alan C. Evans,et al.  A nonparametric method for automatic correction of intensity nonuniformity in MRI data , 1998, IEEE Transactions on Medical Imaging.

[100]  Yoav Freund,et al.  Boosting the margin: A new explanation for the effectiveness of voting methods , 1997, ICML.

[101]  A. Convit,et al.  Specific Hippocampal Volume Reductions in Individuals at Risk for Alzheimer’s Disease , 1997, Neurobiology of Aging.

[102]  J. Csernansky,et al.  Hippocampal atrophy in recurrent major depression. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[103]  B. Lernfelt,et al.  15-year longitudinal study of blood pressure and dementia , 1996, The Lancet.

[104]  M. Pericak-Vance,et al.  Influence of the susceptibility genes apolipoprotein E-epsilon 4 and apolipoprotein E-epsilon 2 on the rate of disease expressivity of late-onset Alzheimer's disease. , 1995, Arzneimittel-Forschung.

[105]  R. Mayeux,et al.  Influence of education and occupation on the incidence of Alzheimer's disease. , 1994, JAMA.

[106]  D. Collins,et al.  Automatic 3D Intersubject Registration of MR Volumetric Data in Standardized Talairach Space , 1994, Journal of computer assisted tomography.

[107]  C. Jack,et al.  Anterior temporal lobes and hippocampal formations: normative volumetric measurements from MR images in young adults. , 1989, Radiology.

[108]  Anthony F. Jorm,et al.  The prevalence of dementia: A quantitative integration of the literature , 1987, Acta psychiatrica Scandinavica.

[109]  C. P. Hughes,et al.  A New Clinical Scale for the Staging of Dementia , 1982, British Journal of Psychiatry.

[110]  S. Folstein,et al.  "Mini-mental state". A practical method for grading the cognitive state of patients for the clinician. , 1975, Journal of psychiatric research.

[111]  R. Hooker Modes of Census-Taking in the British Dominions , 1894 .

[112]  Eugene S. Edgington,et al.  Randomization Tests , 2011, International Encyclopedia of Statistical Science.

[113]  Liana G. Apostolova,et al.  Comparison of AdaBoost and Support Vector Machines for Detecting Alzheimer's Disease Through Automated Hippocampal Segmentation , 2010, IEEE Transactions on Medical Imaging.

[114]  Hongtu Zhu,et al.  Statistical Analyses of Brain Surfaces Using Gaussian Random Fields on 2-D Manifolds , 2007, IEEE Transactions on Medical Imaging.

[115]  A. Toga,et al.  Three-dimensional patterns of hippocampal atrophy in mild cognitive impairment. , 2006, Archives of neurology.

[116]  Norbert Schuff,et al.  Validation Testing of the MRI Calibration Phantom for the Alzheimer's Disease Neuroimaging Initiative Study , 2006 .

[117]  David Wechsler,et al.  Wechsler Memory scale. , 2005 .

[118]  J. Qiao,et al.  Homocysteine and Alzheimer's disease. , 1999, Nutrition reviews.

[119]  R. Sulkava,et al.  APOE epsilon4 does not predict mortality, cognitive decline, or dementia in the oldest old. , 2000, Neurology.

[120]  Y. Benjamini,et al.  Controlling the false discovery rate: a practical and powerful approach to multiple testing , 1995 .

[121]  V. Leirer,et al.  Development and validation of a geriatric depression screening scale: a preliminary report. , 1982, Journal of psychiatric research.