miRGator: an integrated system for functional annotation of microRNAs
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Sanghyuk Lee | Seungyoon Nam | Bumjin Kim | Seokmin Shin | Seokmin Shin | Sanghyuk Lee | S. Nam | Bumjin Kim
[1] A. Pasquinelli,et al. Regulation by let-7 and lin-4 miRNAs Results in Target mRNA Degradation , 2005, Cell.
[2] Anton J. Enright,et al. Requirement of bic/microRNA-155 for Normal Immune Function , 2007, Science.
[3] T. Barrette,et al. Oncomine 3.0: genes, pathways, and networks in a collection of 18,000 cancer gene expression profiles. , 2007, Neoplasia.
[4] H. Horvitz,et al. MicroRNA expression profiles classify human cancers , 2005, Nature.
[5] Stijn van Dongen,et al. miRBase: microRNA sequences, targets and gene nomenclature , 2005, Nucleic Acids Res..
[6] Molly Megraw,et al. miRGen: a database for the study of animal microRNA genomic organization and function , 2006, Nucleic Acids Res..
[7] C. Burge,et al. Conserved Seed Pairing, Often Flanked by Adenosines, Indicates that Thousands of Human Genes are MicroRNA Targets , 2005, Cell.
[8] Alex E. Lash,et al. Gene Expression Omnibus: NCBI gene expression and hybridization array data repository , 2002, Nucleic Acids Res..
[9] Anton J. Enright,et al. Human MicroRNA Targets , 2004, PLoS biology.
[10] N. Rajewsky,et al. Silencing of microRNAs in vivo with ‘antagomirs’ , 2005, Nature.
[11] B. Frey,et al. The functional landscape of mouse gene expression , 2004, Journal of biology.
[12] T. Nilsen,et al. Mechanisms of microRNA‐mediated gene regulation , 2007, Trends in genetics : TIG.
[13] Emily Dimmer,et al. The Gene Ontology Annotation (GOA) Database: sharing knowledge in Uniprot with Gene Ontology , 2004, Nucleic Acids Res..
[14] Michelle S. Scott,et al. Global Survey of Organ and Organelle Protein Expression in Mouse: Combined Proteomic and Transcriptomic Profiling , 2006, Cell.
[15] Susumu Goto,et al. The KEGG resource for deciphering the genome , 2004, Nucleic Acids Res..
[16] Ting Wang,et al. The UCSC Genome Browser Database: update 2009 , 2008, Nucleic Acids Res..
[17] N. Rajewsky. microRNA target predictions in animals , 2006, Nature Genetics.
[18] A. Hatzigeorgiou,et al. TarBase: A comprehensive database of experimentally supported animal microRNA targets. , 2005, RNA.
[19] Gene Ontology Consortium. The Gene Ontology (GO) database and informatics resource , 2003 .
[20] T. Poggio,et al. Multiclass cancer diagnosis using tumor gene expression signatures , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[21] J. Castle,et al. Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs , 2005, Nature.
[22] David Haussler,et al. The UCSC genome browser database: update 2007 , 2006, Nucleic Acids Res..
[23] Steven C. Lawlor,et al. GenMAPP, a new tool for viewing and analyzing microarray data on biological pathways , 2002, Nature Genetics.
[24] Jihoon Kim,et al. ArrayXPath II: mapping and visualizing microarray gene-expression data with biomedical ontologies and integrated biological pathway resources using Scalable Vector Graphics , 2005, Nucleic Acids Res..
[25] Quaid Morris,et al. Probing microRNAs with microarrays: tissue specificity and functional inference. , 2004, RNA.
[26] K. Gunsalus,et al. Combinatorial microRNA target predictions , 2005, Nature Genetics.
[27] Terence P. Speed,et al. A comparison of normalization methods for high density oligonucleotide array data based on variance and bias , 2003, Bioinform..
[28] Hsien-Da Huang,et al. miRNAMap: genomic maps of microRNA genes and their target genes in mammalian genomes , 2005, Nucleic Acids Res..
[29] D. Bartel. MicroRNAs Genomics, Biogenesis, Mechanism, and Function , 2004, Cell.
[30] A. Hatzigeorgiou,et al. A combined computational-experimental approach predicts human microRNA targets. , 2004, Genes & development.